RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 CCDC97Q96F63 343 aaPredicted RBP19.43■□□□□ 0.7
UBR3-201ENST00000272793 ACBD3Q9H3P7 528 aa19.42■□□□□ 0.7
UBR3-201ENST00000272793 MTUS2Q5JR59 1369 aa19.41■□□□□ 0.7
UBR3-201ENST00000272793 KIF3AQ9Y496 699 aa19.41■□□□□ 0.7
UBR3-201ENST00000272793 FAM184AQ8NB25 1140 aa19.41■□□□□ 0.7
UBR3-201ENST00000272793 EPS15P42566 896 aa19.4■□□□□ 0.7
UBR3-201ENST00000272793 ANKRD20A12PQ8NF67 263 aa19.4■□□□□ 0.7
UBR3-201ENST00000272793 TSPYL1Q9H0U9 437 aa19.39■□□□□ 0.7
UBR3-201ENST00000272793 CCAR1Q8IX12 1150 aaKnown RBP19.39■□□□□ 0.69
UBR3-201ENST00000272793 NF2P35240 595 aa19.39■□□□□ 0.69
UBR3-201ENST00000272793 MCTP1Q6DN14 999 aa19.39■□□□□ 0.69
UBR3-201ENST00000272793 CCDC173Q0VFZ6 552 aa19.38■□□□□ 0.69
UBR3-201ENST00000272793 SEPT7Q16181 437 aaKnown RBP19.38■□□□□ 0.69
UBR3-201ENST00000272793 CCDC43Q96MW1 224 aaKnown RBP19.38■□□□□ 0.69
UBR3-201ENST00000272793 CWC22Q9HCG8 908 aaKnown RBP19.38■□□□□ 0.69
UBR3-201ENST00000272793 TRIM34Q9BYJ4 488 aa19.37■□□□□ 0.69
UBR3-201ENST00000272793 MYO6Q9UM54 1294 aa19.36■□□□□ 0.69
UBR3-201ENST00000272793 ITPRIPQ8IWB1 547 aa19.36■□□□□ 0.69
UBR3-201ENST00000272793 ENOX2Q16206 610 aaKnown RBP19.36■□□□□ 0.69
UBR3-201ENST00000272793 FBXW7Q969H0 707 aa19.36■□□□□ 0.69
UBR3-201ENST00000272793 CCDC9Q9Y3X0 531 aaKnown RBP19.36■□□□□ 0.69
UBR3-201ENST00000272793 CAGE1Q8TC20 777 aa19.35■□□□□ 0.69
UBR3-201ENST00000272793 R3HCC1Q9Y3T6 440 aaKnown RBP19.34■□□□□ 0.69
UBR3-201ENST00000272793 ARGLU1Q9NWB6 273 aaPredicted RBP19.34■□□□□ 0.69
UBR3-201ENST00000272793 ST18O60284 1047 aa19.33■□□□□ 0.69
UBR3-201ENST00000272793 IPO9Q96P70 1041 aaKnown RBP19.33■□□□□ 0.68
UBR3-201ENST00000272793 TTLL5Q6EMB2 1281 aa19.32■□□□□ 0.68
UBR3-201ENST00000272793 KCNH8Q96L42 1107 aa19.32■□□□□ 0.68
UBR3-201ENST00000272793 INCENPQ9NQS7 918 aa19.32■□□□□ 0.68
UBR3-201ENST00000272793 HMGN5P82970 282 aaKnown RBP19.31■□□□□ 0.68
UBR3-201ENST00000272793 PODXL2Q9NZ53 605 aa19.31■□□□□ 0.68
UBR3-201ENST00000272793 CCDC47Q96A33 483 aaKnown RBP19.31■□□□□ 0.68
UBR3-201ENST00000272793 TCERG1O14776 1098 aaKnown RBP19.31■□□□□ 0.68
UBR3-201ENST00000272793 IPO8O15397 1037 aaKnown RBP19.31■□□□□ 0.68
UBR3-201ENST00000272793 HOOK1Q9UJC3 728 aaKnown RBP19.31■□□□□ 0.68
UBR3-201ENST00000272793 MNS1Q8NEH6 495 aa19.29■□□□□ 0.68
UBR3-201ENST00000272793 SIN3AQ96ST3 1273 aa19.29■□□□□ 0.68
UBR3-201ENST00000272793 LEKR1Q6ZMV7 388 aa19.28■□□□□ 0.68
UBR3-201ENST00000272793 DDX11L8A8MPP1 907 aa19.28■□□□□ 0.68
UBR3-201ENST00000272793 SLC4A3P48751 1232 aa19.28■□□□□ 0.68
UBR3-201ENST00000272793 TSHZ2Q9NRE2 1034 aa19.28■□□□□ 0.68
UBR3-201ENST00000272793 PAK3O75914 559 aaPredicted RBP19.28■□□□□ 0.68
UBR3-201ENST00000272793 MAPK8IP2Q13387 824 aaPredicted RBP19.26■□□□□ 0.67
UBR3-201ENST00000272793 GTF2E1P29083 439 aaPredicted RBP19.26■□□□□ 0.67
UBR3-201ENST00000272793 SAMD1Q6SPF0 538 aaPredicted RBP19.26■□□□□ 0.67
UBR3-201ENST00000272793 TRIM29Q14134 588 aa19.25■□□□□ 0.67
UBR3-201ENST00000272793 AXDND1Q5T1B0 1012 aaPredicted RBP19.25■□□□□ 0.67
UBR3-201ENST00000272793 TAF3Q5VWG9 929 aa19.25■□□□□ 0.67
UBR3-201ENST00000272793 DDX49Q9Y6V7 483 aaKnown RBP19.25■□□□□ 0.67
UBR3-201ENST00000272793 PPM1FP49593 454 aaPredicted RBP19.25■□□□□ 0.67
UBR3-201ENST00000272793 CCDC66A2RUB6 948 aa19.24■□□□□ 0.67
UBR3-201ENST00000272793 SYNE3Q6ZMZ3 975 aa19.24■□□□□ 0.67
UBR3-201ENST00000272793 IFT57Q9NWB7 429 aa19.24■□□□□ 0.67
UBR3-201ENST00000272793 GIMAP7Q8NHV1 300 aa19.24■□□□□ 0.67
UBR3-201ENST00000272793 GOLGA6L7A0A1B0GV03 622 aa19.23■□□□□ 0.67
UBR3-201ENST00000272793 OFD1O75665 1012 aa19.23■□□□□ 0.67
UBR3-201ENST00000272793 ANKRD18AQ8IVF6 992 aa19.23■□□□□ 0.67
UBR3-201ENST00000272793 SLC4A10Q6U841 1118 aa19.23■□□□□ 0.67
UBR3-201ENST00000272793 KIAA0754O94854 1291 aa19.22■□□□□ 0.67
UBR3-201ENST00000272793 CENPHQ9H3R5 247 aa19.22■□□□□ 0.67
UBR3-201ENST00000272793 SAFB2Q14151 953 aaKnown RBP eCLIP19.22■□□□□ 0.67
UBR3-201ENST00000272793 DHX16O60231 1041 aaKnown RBP19.22■□□□□ 0.67
UBR3-201ENST00000272793 CSB-PGBD3P0DP91 1061 aa19.22■□□□□ 0.67
UBR3-201ENST00000272793 CT47B1P0C2W7 299 aaPredicted RBP19.21■□□□□ 0.67
UBR3-201ENST00000272793 WWC2Q6AWC2 1192 aa19.21■□□□□ 0.67
UBR3-201ENST00000272793 AMOTL1Q8IY63 956 aa19.21■□□□□ 0.67
UBR3-201ENST00000272793 RCAN3Q9UKA8 241 aa19.21■□□□□ 0.67
UBR3-201ENST00000272793 RALBP1Q15311 655 aa19.21■□□□□ 0.67
UBR3-201ENST00000272793 TMEM132AQ24JP5 1023 aa19.2■□□□□ 0.66
UBR3-201ENST00000272793 SRPK2P78362 688 aaKnown RBP19.2■□□□□ 0.66
UBR3-201ENST00000272793 RWDD1Q9H446 243 aaPredicted RBP19.2■□□□□ 0.66
UBR3-201ENST00000272793 GOLGA6L10A0A0M3HER8 536 aa19.2■□□□□ 0.66
UBR3-201ENST00000272793 GOLGA6L10A6NI86 522 aa19.2■□□□□ 0.66
UBR3-201ENST00000272793 RILPL2Q969X0 211 aa19.2■□□□□ 0.66
UBR3-201ENST00000272793 LMOD3Q0VAK6 560 aa19.19■□□□□ 0.66
UBR3-201ENST00000272793 PDILTQ8N807 584 aa19.19■□□□□ 0.66
UBR3-201ENST00000272793 ATP6V1DQ9Y5K8 247 aa19.19■□□□□ 0.66
UBR3-201ENST00000272793 EZRP15311 586 aaKnown RBP19.19■□□□□ 0.66
UBR3-201ENST00000272793 ZNF526Q8TF50 670 aaPredicted RBP19.19■□□□□ 0.66
UBR3-201ENST00000272793 GSE1Q14687 1217 aa19.19■□□□□ 0.66
UBR3-201ENST00000272793 ERCC4Q92889 916 aaPredicted RBP19.18■□□□□ 0.66
UBR3-201ENST00000272793 NOL10Q9BSC4 688 aaKnown RBP19.18■□□□□ 0.66
UBR3-201ENST00000272793 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.18■□□□□ 0.66
UBR3-201ENST00000272793 RBM25P49756 843 aaKnown RBP19.18■□□□□ 0.66
UBR3-201ENST00000272793 CCDC180Q9P1Z9 1646 aa19.17■□□□□ 0.66
UBR3-201ENST00000272793 GBP2P32456 591 aaPredicted RBP19.17■□□□□ 0.66
UBR3-201ENST00000272793 CEP63Q96MT8 703 aa19.17■□□□□ 0.66
UBR3-201ENST00000272793 ERLIN2O94905 339 aa19.16■□□□□ 0.66
UBR3-201ENST00000272793 PMFBP1Q8TBY8 1022 aa19.16■□□□□ 0.66
UBR3-201ENST00000272793 MORC1Q86VD1 984 aa19.16■□□□□ 0.66
UBR3-201ENST00000272793 TAX1BP1Q86VP1 789 aa19.15■□□□□ 0.66
UBR3-201ENST00000272793 SASS6Q6UVJ0 657 aa19.15■□□□□ 0.66
UBR3-201ENST00000272793 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.15■□□□□ 0.66
UBR3-201ENST00000272793 CLUAP1Q96AJ1 413 aa19.14■□□□□ 0.66
UBR3-201ENST00000272793 DDX23Q9BUQ8 820 aaKnown RBP19.14■□□□□ 0.66
UBR3-201ENST00000272793 SPAG9O60271 1321 aaKnown RBP19.14■□□□□ 0.65
UBR3-201ENST00000272793 BICD2Q8TD16 824 aa19.13■□□□□ 0.65
UBR3-201ENST00000272793 PKNOX2Q96KN3 472 aa19.13■□□□□ 0.65
UBR3-201ENST00000272793 STK31Q9BXU1 1019 aa19.12■□□□□ 0.65
UBR3-201ENST00000272793 FOSBP53539 338 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms