RNA–Protein interactions for RNA: ENST00000272238.8

ATP6V1C2-201, Transcript of ATPase H+ transporting V1 subunit C2, humanhuman

TSL 5 BASIC

Gene ATP6V1C2, Length 1,565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C2-201ENST00000272238 MROH1Q8NDA8 1641 aa23.49■■□□□ 1.35
ATP6V1C2-201ENST00000272238 DEPDC5O75140 1603 aa23.49■■□□□ 1.35
ATP6V1C2-201ENST00000272238 CEP152O94986 1710 aa23.47■■□□□ 1.35
ATP6V1C2-201ENST00000272238 NAIPQ13075 1403 aa23.47■■□□□ 1.35
ATP6V1C2-201ENST00000272238 KDM4FA0A1W2PPD8 638 aa23.46■■□□□ 1.35
ATP6V1C2-201ENST00000272238 PRDM15P57071 1507 aaPredicted RBP23.46■■□□□ 1.35
ATP6V1C2-201ENST00000272238 HFM1A2PYH4 1435 aa23.45■■□□□ 1.35
ATP6V1C2-201ENST00000272238 KDM5DQ9BY66 1539 aa23.44■■□□□ 1.34
ATP6V1C2-201ENST00000272238 UNC13BO14795 1591 aa23.43■■□□□ 1.34
ATP6V1C2-201ENST00000272238 ZC3H13Q5T200 1668 aaKnown RBP23.43■■□□□ 1.34
ATP6V1C2-201ENST00000272238 PLPPR3Q6T4P5 718 aa23.43■■□□□ 1.34
ATP6V1C2-201ENST00000272238 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.42■■□□□ 1.34
ATP6V1C2-201ENST00000272238 ESF1Q9H501 851 aaKnown RBP23.42■■□□□ 1.34
ATP6V1C2-201ENST00000272238 MROH2AA6NES4 1674 aa23.4■■□□□ 1.34
ATP6V1C2-201ENST00000272238 C3P01024 1663 aa23.4■■□□□ 1.34
ATP6V1C2-201ENST00000272238 ABCC3O15438 1527 aa23.38■■□□□ 1.33
ATP6V1C2-201ENST00000272238 CAMSAP1Q5T5Y3 1602 aa23.38■■□□□ 1.33
ATP6V1C2-201ENST00000272238 PTPRMP28827 1452 aa23.38■■□□□ 1.33
ATP6V1C2-201ENST00000272238 FAM135AQ9P2D6 1515 aa23.36■■□□□ 1.33
ATP6V1C2-201ENST00000272238 WASHC2CQ9Y4E1 1318 aa23.35■■□□□ 1.33
ATP6V1C2-201ENST00000272238 CNTLNQ9NXG0 1405 aa23.35■■□□□ 1.33
ATP6V1C2-201ENST00000272238 TRIM26Q12899 539 aaPredicted RBP23.35■■□□□ 1.33
ATP6V1C2-201ENST00000272238 KANK1Q14678 1352 aa23.34■■□□□ 1.33
ATP6V1C2-201ENST00000272238 VWDEQ8N2E2 1590 aa23.33■■□□□ 1.33
ATP6V1C2-201ENST00000272238 IQGAP3Q86VI3 1631 aa23.33■■□□□ 1.33
ATP6V1C2-201ENST00000272238 SETD5Q9C0A6 1442 aa23.32■■□□□ 1.32
ATP6V1C2-201ENST00000272238 CEBPAP49715 358 aaPredicted RBP23.29■■□□□ 1.32
ATP6V1C2-201ENST00000272238 TET3O43151 1660 aa23.29■■□□□ 1.32
ATP6V1C2-201ENST00000272238 RAB3GAP2Q9H2M9 1393 aa23.29■■□□□ 1.32
ATP6V1C2-201ENST00000272238 NUP155O75694 1391 aa23.28■■□□□ 1.32
ATP6V1C2-201ENST00000272238 EFCAB6Q5THR3 1501 aa23.28■■□□□ 1.32
ATP6V1C2-201ENST00000272238 PPP6R1Q9UPN7 881 aa23.27■■□□□ 1.32
ATP6V1C2-201ENST00000272238 ZMYM3Q14202 1370 aa23.27■■□□□ 1.32
ATP6V1C2-201ENST00000272238 CFAP65Q6ZU64 1925 aaKnown RBP23.26■■□□□ 1.31
ATP6V1C2-201ENST00000272238 TRIM52Q96A61 297 aa23.26■■□□□ 1.31
ATP6V1C2-201ENST00000272238 LMTK2Q8IWU2 1503 aa23.26■■□□□ 1.31
ATP6V1C2-201ENST00000272238 E9PCH4 1651 aa23.24■■□□□ 1.31
ATP6V1C2-201ENST00000272238 PZPP20742 1482 aa23.23■■□□□ 1.31
ATP6V1C2-201ENST00000272238 PREX1Q8TCU6 1659 aa23.23■■□□□ 1.31
ATP6V1C2-201ENST00000272238 AEBP2Q6ZN18 517 aaPredicted RBP23.22■■□□□ 1.31
ATP6V1C2-201ENST00000272238 NPATQ14207 1427 aa23.2■■□□□ 1.3
ATP6V1C2-201ENST00000272238 MYO3AQ8NEV4 1616 aa23.19■■□□□ 1.3
ATP6V1C2-201ENST00000272238 ERVK-7P63135 1459 aa23.16■■□□□ 1.3
ATP6V1C2-201ENST00000272238 FBXO31Q5XUX0 539 aaPredicted RBP23.16■■□□□ 1.3
ATP6V1C2-201ENST00000272238 SPATA31D1Q6ZQQ2 1576 aa23.15■■□□□ 1.3
ATP6V1C2-201ENST00000272238 PCGF6Q9BYE7 350 aa23.15■■□□□ 1.3
ATP6V1C2-201ENST00000272238 ARHGAP31Q2M1Z3 1444 aa23.14■■□□□ 1.3
ATP6V1C2-201ENST00000272238 SPHKAPQ2M3C7 1700 aa23.13■■□□□ 1.29
ATP6V1C2-201ENST00000272238 RPRD2Q5VT52 1461 aaKnown RBP23.12■■□□□ 1.29
ATP6V1C2-201ENST00000272238 SLC4A1APQ9BWU0 796 aaKnown RBP23.12■■□□□ 1.29
ATP6V1C2-201ENST00000272238 SYNMO15061 1565 aa23.11■■□□□ 1.29
ATP6V1C2-201ENST00000272238 TNRQ92752 1358 aa23.11■■□□□ 1.29
ATP6V1C2-201ENST00000272238 ZNF142P52746 1687 aaPredicted RBP23.09■■□□□ 1.29
ATP6V1C2-201ENST00000272238 UHRF1BP1Q6BDS2 1440 aa23.08■■□□□ 1.29
ATP6V1C2-201ENST00000272238 UGGT1Q9NYU2 1555 aa23.07■■□□□ 1.28
ATP6V1C2-201ENST00000272238 CEP170BQ9Y4F5 1589 aaPredicted RBP23.07■■□□□ 1.28
ATP6V1C2-201ENST00000272238 PKD2Q13563 968 aa23.06■■□□□ 1.28
ATP6V1C2-201ENST00000272238 SETD1BQ9UPS6 1966 aaKnown RBP23.06■■□□□ 1.28
ATP6V1C2-201ENST00000272238 LMTK3Q96Q04 1460 aa23.06■■□□□ 1.28
ATP6V1C2-201ENST00000272238 FOXD1Q16676 465 aa23.05■■□□□ 1.28
ATP6V1C2-201ENST00000272238 PIK3C2BO00750 1634 aa23.04■■□□□ 1.28
ATP6V1C2-201ENST00000272238 NOS1P29475 1434 aa23.04■■□□□ 1.28
ATP6V1C2-201ENST00000272238 MPHOSPH9Q99550 1183 aa23.04■■□□□ 1.28
ATP6V1C2-201ENST00000272238 TRPM2O94759 1503 aa23.01■■□□□ 1.27
ATP6V1C2-201ENST00000272238 ACIN1Q9UKV3 1341 aaKnown RBP23.01■■□□□ 1.27
ATP6V1C2-201ENST00000272238 NLRP1Q9C000 1473 aa23.01■■□□□ 1.27
ATP6V1C2-201ENST00000272238 CLTCL1P53675 1640 aa23■■□□□ 1.27
ATP6V1C2-201ENST00000272238 UBR1Q8IWV7 1749 aa22.99■■□□□ 1.27
ATP6V1C2-201ENST00000272238 HRCP23327 699 aa22.99■■□□□ 1.27
ATP6V1C2-201ENST00000272238 A2ML1A8K2U0 1454 aa22.99■■□□□ 1.27
ATP6V1C2-201ENST00000272238 MYO5BQ9ULV0 1848 aa22.98■■□□□ 1.27
ATP6V1C2-201ENST00000272238 ADGRB3O60242 1522 aa22.96■■□□□ 1.27
ATP6V1C2-201ENST00000272238 PTPRTO14522 1441 aa22.95■■□□□ 1.27
ATP6V1C2-201ENST00000272238 HSPA2P54652 639 aa22.95■■□□□ 1.26
ATP6V1C2-201ENST00000272238 PLA2R1Q13018 1463 aa22.94■■□□□ 1.26
ATP6V1C2-201ENST00000272238 KIF1BO60333 1816 aa22.93■■□□□ 1.26
ATP6V1C2-201ENST00000272238 IDI1Q13907 227 aa22.91■■□□□ 1.26
ATP6V1C2-201ENST00000272238 STAG3Q9UJ98 1225 aa22.91■■□□□ 1.26
ATP6V1C2-201ENST00000272238 KDM5AP29375 1690 aaKnown RBP22.9■■□□□ 1.26
ATP6V1C2-201ENST00000272238 TMEM131LA2VDJ0 1609 aa22.9■■□□□ 1.26
ATP6V1C2-201ENST00000272238 CHGAP10645 457 aaKnown RBP22.9■■□□□ 1.26
ATP6V1C2-201ENST00000272238 CCDC144AA2RUR9 1427 aa22.9■■□□□ 1.26
ATP6V1C2-201ENST00000272238 SLC52A1Q9NWF4 448 aa22.89■■□□□ 1.25
ATP6V1C2-201ENST00000272238 POLR1AO95602 1720 aaPredicted RBP22.88■■□□□ 1.25
ATP6V1C2-201ENST00000272238 DHX57Q6P158 1386 aaKnown RBP22.87■■□□□ 1.25
ATP6V1C2-201ENST00000272238 STRCQ7RTU9 1775 aa22.83■■□□□ 1.25
ATP6V1C2-201ENST00000272238 ANKRD30BQ9BXX2 1392 aa22.82■■□□□ 1.24
ATP6V1C2-201ENST00000272238 THEMISQ8N1K5 641 aaPredicted RBP22.8■■□□□ 1.24
ATP6V1C2-201ENST00000272238 SLIT1O75093 1534 aa22.79■■□□□ 1.24
ATP6V1C2-201ENST00000272238 NEURL4Q96JN8 1562 aa22.77■■□□□ 1.24
ATP6V1C2-201ENST00000272238 ZNF326Q5BKZ1 582 aaKnown RBP22.77■■□□□ 1.24
ATP6V1C2-201ENST00000272238 TMEM2Q9UHN6 1383 aa22.77■■□□□ 1.24
ATP6V1C2-201ENST00000272238 ARHGAP23Q9P227 1491 aa22.76■■□□□ 1.23
ATP6V1C2-201ENST00000272238 NCKAP5LQ9HCH0 1330 aa22.75■■□□□ 1.23
ATP6V1C2-201ENST00000272238 RIMS2Q9UQ26 1411 aa22.74■■□□□ 1.23
ATP6V1C2-201ENST00000272238 SCAF11Q99590 1463 aaKnown RBP22.74■■□□□ 1.23
ATP6V1C2-201ENST00000272238 NUTM2DQ5VT03 806 aaPredicted RBP22.74■■□□□ 1.23
ATP6V1C2-201ENST00000272238 SENP3Q9H4L4 574 aaPredicted RBP22.74■■□□□ 1.23
ATP6V1C2-201ENST00000272238 PPLO60437 1756 aa22.74■■□□□ 1.23
ATP6V1C2-201ENST00000272238 NEXMIFQ5QGS0 1516 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms