RNA–Protein interactions for RNA: ENST00000270221.10

EMP3-201, Transcript of epithelial membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EMP3, Length 876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EMP3-201ENST00000270221 LRRC7Q96NW7 1537 aa15.3■□□□□ 0.04
EMP3-201ENST00000270221 ITSN2Q9NZM3 1697 aa15.28■□□□□ 0.04
EMP3-201ENST00000270221 GGT6Q6P531 493 aa15.28■□□□□ 0.04
EMP3-201ENST00000270221 NPHP4O75161 1426 aaPredicted RBP15.27■□□□□ 0.04
EMP3-201ENST00000270221 TROQ12816 1431 aaPredicted RBP15.27■□□□□ 0.04
EMP3-201ENST00000270221 RRBP1Q9P2E9 1410 aaKnown RBP15.27■□□□□ 0.04
EMP3-201ENST00000270221 CDC42BPBQ9Y5S2 1711 aa15.27■□□□□ 0.04
EMP3-201ENST00000270221 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.26■□□□□ 0.032e-6■□□□□ 8.8
EMP3-201ENST00000270221 SYNMO15061 1565 aa15.25■□□□□ 0.03
EMP3-201ENST00000270221 MED14O60244 1454 aa15.24■□□□□ 0.03
EMP3-201ENST00000270221 STRCP1A6NGW2 1772 aa15.24■□□□□ 0.03
EMP3-201ENST00000270221 CCNB3Q8WWL7 1395 aa15.24■□□□□ 0.03
EMP3-201ENST00000270221 SPAG9O60271 1321 aaKnown RBP15.23■□□□□ 0.03
EMP3-201ENST00000270221 KANK4Q5T7N3 995 aaPredicted RBP15.23■□□□□ 0.03
EMP3-201ENST00000270221 THEMISQ8N1K5 641 aaPredicted RBP15.23■□□□□ 0.03
EMP3-201ENST00000270221 SAMD9LQ8IVG5 1584 aa15.23■□□□□ 0.03
EMP3-201ENST00000270221 TNRQ92752 1358 aa15.23■□□□□ 0.03
EMP3-201ENST00000270221 MTUS2Q5JR59 1369 aa15.22■□□□□ 0.03
EMP3-201ENST00000270221 DEPDC5O75140 1603 aa15.21■□□□□ 0.03
EMP3-201ENST00000270221 PREX2Q70Z35 1606 aa15.21■□□□□ 0.03
EMP3-201ENST00000270221 A2MP01023 1474 aa15.2■□□□□ 0.02
EMP3-201ENST00000270221 PLXNC1O60486 1568 aa15.2■□□□□ 0.02
EMP3-201ENST00000270221 FAM135BQ49AJ0 1406 aa15.2■□□□□ 0.02
EMP3-201ENST00000270221 IQGAP1P46940 1657 aa15.2■□□□□ 0.02
EMP3-201ENST00000270221 EHBP1L1Q8N3D4 1523 aa15.2■□□□□ 0.02
EMP3-201ENST00000270221 FBXO31Q5XUX0 539 aaPredicted RBP15.19■□□□□ 0.02
EMP3-201ENST00000270221 CCER1Q8TC90 406 aaPredicted RBP15.19■□□□□ 0.02
EMP3-201ENST00000270221 TRIM52Q96A61 297 aa15.19■□□□□ 0.02
EMP3-201ENST00000270221 FAM135AQ9P2D6 1515 aa15.17■□□□□ 0.02
EMP3-201ENST00000270221 ATP7AQ04656 1500 aa15.17■□□□□ 0.02
EMP3-201ENST00000270221 UGGT1Q9NYU2 1555 aa15.16■□□□□ 0.02
EMP3-201ENST00000270221 ZNF777Q9ULD5 760 aaPredicted RBP15.16■□□□□ 0.02
EMP3-201ENST00000270221 SRCAPQ6ZRS2 3230 aa15.15■□□□□ 0.02
EMP3-201ENST00000270221 SYCP2Q9BX26 1530 aa15.13■□□□□ 0.01
EMP3-201ENST00000270221 HNRNPMP52272 730 aaKnown RBP eCLIP15.13■□□□□ 0.01
EMP3-201ENST00000270221 NLRP1Q9C000 1473 aa15.13■□□□□ 0.01
EMP3-201ENST00000270221 PZPP20742 1482 aa15.12■□□□□ 0.01
EMP3-201ENST00000270221 CLSPNQ9HAW4 1339 aa15.12■□□□□ 0.01
EMP3-201ENST00000270221 ZNF772Q68DY9 489 aaPredicted RBP15.11■□□□□ 0.01
EMP3-201ENST00000270221 INO80Q9ULG1 1556 aaPredicted RBP15.11■□□□□ 0.01
EMP3-201ENST00000270221 MIA2Q96PC5 1412 aa15.1■□□□□ 0.01
EMP3-201ENST00000270221 ROBO1Q9Y6N7 1651 aa15.09■□□□□ 0.01
EMP3-201ENST00000270221 JCADQ9P266 1359 aa15.09■□□□□ 0.01
EMP3-201ENST00000270221 CDC42BPAQ5VT25 1732 aa15.09■□□□□ 0.01
EMP3-201ENST00000270221 XIRP1Q702N8 1843 aaKnown RBP15.08■□□□□ 0.01
EMP3-201ENST00000270221 ACIN1Q9UKV3 1341 aaKnown RBP15.08■□□□□ 0
EMP3-201ENST00000270221 RXRBP28702 533 aa15.07■□□□□ 0
EMP3-201ENST00000270221 MEX3CQ5U5Q3 659 aaKnown RBP15.07■□□□□ 0
EMP3-201ENST00000270221 FGD6Q6ZV73 1430 aa15.07■□□□□ 0
EMP3-201ENST00000270221 NCOA2Q15596 1464 aa15.07■□□□□ 0
EMP3-201ENST00000270221 ZC3H13Q5T200 1668 aaKnown RBP15.06■□□□□ 0
EMP3-201ENST00000270221 ADGBQ8N7X0 1667 aa15.06■□□□□ 0
EMP3-201ENST00000270221 MYOM3Q5VTT5 1437 aa15.06■□□□□ 0
EMP3-201ENST00000270221 KDM5DQ9BY66 1539 aa15.06■□□□□ 0
EMP3-201ENST00000270221 LRRIQ1Q96JM4 1722 aa15.04■□□□□ -0
EMP3-201ENST00000270221 KIAA1107Q9UPP5 1409 aa15.04■□□□□ -0
EMP3-201ENST00000270221 WASHC2CQ9Y4E1 1318 aa15.04■□□□□ -0
EMP3-201ENST00000270221 FAM50AQ14320 339 aaKnown RBP15.03■□□□□ -0
EMP3-201ENST00000270221 PLEKHH2Q8IVE3 1493 aa15.02■□□□□ -0
EMP3-201ENST00000270221 CDK12Q9NYV4 1490 aaPredicted RBP15.02■□□□□ -0
EMP3-201ENST00000270221 TMEM94Q12767 1356 aa15.02■□□□□ -0
EMP3-201ENST00000270221 KIF3BO15066 747 aa15.02■□□□□ -0
EMP3-201ENST00000270221 PHLPP1O60346 1717 aa15.02□□□□□ -0.01
EMP3-201ENST00000270221 SCAF11Q99590 1463 aaKnown RBP15.01□□□□□ -0.01
EMP3-201ENST00000270221 LRP6O75581 1613 aa15.01□□□□□ -0.01
EMP3-201ENST00000270221 DHX29Q7Z478 1369 aaKnown RBP15□□□□□ -0.01
EMP3-201ENST00000270221 SPATA31A6Q5VVP1 1343 aa15□□□□□ -0.01
EMP3-201ENST00000270221 FOXD1Q16676 465 aa15□□□□□ -0.01
EMP3-201ENST00000270221 ZRANB1Q9UGI0 708 aa15□□□□□ -0.01
EMP3-201ENST00000270221 GPATCH8Q9UKJ3 1502 aaKnown RBP14.99□□□□□ -0.01
EMP3-201ENST00000270221 SETD5Q9C0A6 1442 aa14.98□□□□□ -0.01
EMP3-201ENST00000270221 TXNDC2Q86VQ3 553 aa14.97□□□□□ -0.01
EMP3-201ENST00000270221 CFDP1Q9UEE9 299 aaPredicted RBP14.97□□□□□ -0.01
EMP3-201ENST00000270221 LTKP29376 864 aa14.96□□□□□ -0.01
EMP3-201ENST00000270221 PTPN23Q9H3S7 1636 aa14.95□□□□□ -0.02
EMP3-201ENST00000270221 PROSER2Q86WR7 435 aaPredicted RBP14.95□□□□□ -0.02
EMP3-201ENST00000270221 RBM33Q96EV2 1170 aaKnown RBP14.95□□□□□ -0.02
EMP3-201ENST00000270221 SLAIN2Q9P270 581 aa14.95□□□□□ -0.02
EMP3-201ENST00000270221 COL16A1Q07092 1604 aaPredicted RBP14.94□□□□□ -0.02
EMP3-201ENST00000270221 SETBP1Q9Y6X0 1596 aa14.94□□□□□ -0.02
EMP3-201ENST00000270221 RTEL1-TNFRSF6BF6WH68 1400 aa14.93□□□□□ -0.02
EMP3-201ENST00000270221 NUTM2BA6NNL0 878 aaPredicted RBP14.93□□□□□ -0.02
EMP3-201ENST00000270221 NUTM2EB1AL46 878 aaPredicted RBP14.93□□□□□ -0.02
EMP3-201ENST00000270221 NUTM2DQ5VT03 806 aaPredicted RBP14.93□□□□□ -0.02
EMP3-201ENST00000270221 NUTM2AQ8IVF1 878 aaPredicted RBP14.93□□□□□ -0.02
EMP3-201ENST00000270221 KCNA6P17658 529 aa14.92□□□□□ -0.02
EMP3-201ENST00000270221 ITGAEP38570 1179 aa14.92□□□□□ -0.02
EMP3-201ENST00000270221 EID1Q9Y6B2 187 aa14.92□□□□□ -0.02
EMP3-201ENST00000270221 MSH6P52701 1360 aa14.92□□□□□ -0.02
EMP3-201ENST00000270221 RGS12O14924 1447 aa14.92□□□□□ -0.02
EMP3-201ENST00000270221 UBR1Q8IWV7 1749 aa14.91□□□□□ -0.02
EMP3-201ENST00000270221 ARHGAP23Q9P227 1491 aa14.9□□□□□ -0.02
EMP3-201ENST00000270221 SLIT1O75093 1534 aa14.9□□□□□ -0.02
EMP3-201ENST00000270221 HFM1A2PYH4 1435 aa14.9□□□□□ -0.02
EMP3-201ENST00000270221 ERVK-7P63135 1459 aa14.89□□□□□ -0.03
EMP3-201ENST00000270221 RAB3GAP2Q9H2M9 1393 aa14.89□□□□□ -0.03
EMP3-201ENST00000270221 AFF2P51816 1311 aa14.89□□□□□ -0.03
EMP3-201ENST00000270221 DHX57Q6P158 1386 aaKnown RBP14.88□□□□□ -0.03
EMP3-201ENST00000270221 PRDM15P57071 1507 aaPredicted RBP14.88□□□□□ -0.03
EMP3-201ENST00000270221 RBM6P78332 1123 aaKnown RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms