RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 C3P01024 1663 aa11.02□□□□□ -0.64
DEPDC1B-201ENST00000265036 CEP152O94986 1710 aa11.02□□□□□ -0.65
DEPDC1B-201ENST00000265036 MROH1Q8NDA8 1641 aa11.02□□□□□ -0.65
DEPDC1B-201ENST00000265036 EIF2AK4Q9P2K8 1649 aaKnown RBP11.01□□□□□ -0.65
DEPDC1B-201ENST00000265036 CFAP65Q6ZU64 1925 aaKnown RBP11.01□□□□□ -0.65
DEPDC1B-201ENST00000265036 RNF17Q9BXT8 1623 aaKnown RBP11.01□□□□□ -0.65
DEPDC1B-201ENST00000265036 ERBINQ96RT1 1412 aa11□□□□□ -0.65
DEPDC1B-201ENST00000265036 ANKRD50Q9ULJ7 1429 aa11□□□□□ -0.65
DEPDC1B-201ENST00000265036 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11□□□□□ -0.65
DEPDC1B-201ENST00000265036 KDM5DQ9BY66 1539 aa10.99□□□□□ -0.65
DEPDC1B-201ENST00000265036 WASHC2CQ9Y4E1 1318 aa10.99□□□□□ -0.65
DEPDC1B-201ENST00000265036 ABCC3O15438 1527 aa10.97□□□□□ -0.65
DEPDC1B-201ENST00000265036 PRDM15P57071 1507 aaPredicted RBP10.97□□□□□ -0.65
DEPDC1B-201ENST00000265036 DEPDC5O75140 1603 aa10.97□□□□□ -0.65
DEPDC1B-201ENST00000265036 MROH2AA6NES4 1674 aa10.97□□□□□ -0.65
DEPDC1B-201ENST00000265036 ROCK1Q13464 1354 aa10.97□□□□□ -0.65
DEPDC1B-201ENST00000265036 GCC2Q8IWJ2 1684 aa10.96□□□□□ -0.65
DEPDC1B-201ENST00000265036 ZMYM3Q14202 1370 aa10.96□□□□□ -0.65
DEPDC1B-201ENST00000265036 CNTLNQ9NXG0 1405 aa10.96□□□□□ -0.65
DEPDC1B-201ENST00000265036 CAMSAP1Q5T5Y3 1602 aa10.95□□□□□ -0.66
DEPDC1B-201ENST00000265036 NAIPQ13075 1403 aa10.95□□□□□ -0.66
DEPDC1B-201ENST00000265036 FBXO31Q5XUX0 539 aaPredicted RBP10.95□□□□□ -0.66
DEPDC1B-201ENST00000265036 ZC3H13Q5T200 1668 aaKnown RBP10.94□□□□□ -0.66
DEPDC1B-201ENST00000265036 HSPA2P54652 639 aa10.94□□□□□ -0.66
DEPDC1B-201ENST00000265036 PREX1Q8TCU6 1659 aa10.93□□□□□ -0.66
DEPDC1B-201ENST00000265036 UNC13BO14795 1591 aa10.93□□□□□ -0.66
DEPDC1B-201ENST00000265036 LMTK3Q96Q04 1460 aa10.92□□□□□ -0.66
DEPDC1B-201ENST00000265036 HFM1A2PYH4 1435 aa10.92□□□□□ -0.66
DEPDC1B-201ENST00000265036 KANK1Q14678 1352 aa10.92□□□□□ -0.66
DEPDC1B-201ENST00000265036 MYO3AQ8NEV4 1616 aa10.91□□□□□ -0.66
DEPDC1B-201ENST00000265036 PZPP20742 1482 aa10.91□□□□□ -0.66
DEPDC1B-201ENST00000265036 SETD1BQ9UPS6 1966 aaKnown RBP10.91□□□□□ -0.66
DEPDC1B-201ENST00000265036 VWDEQ8N2E2 1590 aa10.91□□□□□ -0.66
DEPDC1B-201ENST00000265036 NPATQ14207 1427 aa10.9□□□□□ -0.66
DEPDC1B-201ENST00000265036 NUP155O75694 1391 aa10.9□□□□□ -0.66
DEPDC1B-201ENST00000265036 EFCAB6Q5THR3 1501 aa10.9□□□□□ -0.67
DEPDC1B-201ENST00000265036 UHRF1BP1Q6BDS2 1440 aa10.9□□□□□ -0.67
DEPDC1B-201ENST00000265036 FAM135AQ9P2D6 1515 aa10.89□□□□□ -0.67
DEPDC1B-201ENST00000265036 PPP6R1Q9UPN7 881 aa10.89□□□□□ -0.67
DEPDC1B-201ENST00000265036 IQGAP3Q86VI3 1631 aa10.89□□□□□ -0.67
DEPDC1B-201ENST00000265036 TRIM52Q96A61 297 aa10.88□□□□□ -0.67
DEPDC1B-201ENST00000265036 ERVK-7P63135 1459 aa10.88□□□□□ -0.67
DEPDC1B-201ENST00000265036 TET3O43151 1660 aa10.88□□□□□ -0.67
DEPDC1B-201ENST00000265036 E9PCH4 1651 aa10.87□□□□□ -0.67
DEPDC1B-201ENST00000265036 TNRQ92752 1358 aa10.87□□□□□ -0.67
DEPDC1B-201ENST00000265036 CEP170BQ9Y4F5 1589 aaPredicted RBP10.87□□□□□ -0.67
DEPDC1B-201ENST00000265036 SPATA31D1Q6ZQQ2 1576 aa10.86□□□□□ -0.67
DEPDC1B-201ENST00000265036 LMTK2Q8IWU2 1503 aa10.86□□□□□ -0.67
DEPDC1B-201ENST00000265036 UGGT1Q9NYU2 1555 aa10.86□□□□□ -0.67
DEPDC1B-201ENST00000265036 RAB3GAP2Q9H2M9 1393 aa10.85□□□□□ -0.67
DEPDC1B-201ENST00000265036 SYNMO15061 1565 aa10.85□□□□□ -0.67
DEPDC1B-201ENST00000265036 ZNF142P52746 1687 aaPredicted RBP10.85□□□□□ -0.67
DEPDC1B-201ENST00000265036 SETD5Q9C0A6 1442 aa10.84□□□□□ -0.67
DEPDC1B-201ENST00000265036 FOXD1Q16676 465 aa10.83□□□□□ -0.68
DEPDC1B-201ENST00000265036 ARHGAP31Q2M1Z3 1444 aa10.83□□□□□ -0.68
DEPDC1B-201ENST00000265036 PIK3C2BO00750 1634 aa10.82□□□□□ -0.68
DEPDC1B-201ENST00000265036 SLC4A1APQ9BWU0 796 aaKnown RBP10.81□□□□□ -0.68
DEPDC1B-201ENST00000265036 SENP3Q9H4L4 574 aaPredicted RBP10.81□□□□□ -0.68
DEPDC1B-201ENST00000265036 A2ML1A8K2U0 1454 aa10.81□□□□□ -0.68
DEPDC1B-201ENST00000265036 MYO5BQ9ULV0 1848 aa10.81□□□□□ -0.68
DEPDC1B-201ENST00000265036 SPHKAPQ2M3C7 1700 aa10.81□□□□□ -0.68
DEPDC1B-201ENST00000265036 STRCQ7RTU9 1775 aa10.81□□□□□ -0.68
DEPDC1B-201ENST00000265036 UBR1Q8IWV7 1749 aa10.8□□□□□ -0.68
DEPDC1B-201ENST00000265036 PKD2Q13563 968 aa10.8□□□□□ -0.68
DEPDC1B-201ENST00000265036 NOS1P29475 1434 aa10.79□□□□□ -0.68
DEPDC1B-201ENST00000265036 RPRD2Q5VT52 1461 aaKnown RBP10.79□□□□□ -0.68
DEPDC1B-201ENST00000265036 NLRP1Q9C000 1473 aa10.79□□□□□ -0.68
DEPDC1B-201ENST00000265036 CHGAP10645 457 aaKnown RBP10.79□□□□□ -0.68
DEPDC1B-201ENST00000265036 IDI1Q13907 227 aa10.78□□□□□ -0.68
DEPDC1B-201ENST00000265036 STAG3Q9UJ98 1225 aa10.78□□□□□ -0.68
DEPDC1B-201ENST00000265036 NCKAP5LQ9HCH0 1330 aa10.78□□□□□ -0.68
DEPDC1B-201ENST00000265036 POLR1AO95602 1720 aaPredicted RBP10.76□□□□□ -0.69
DEPDC1B-201ENST00000265036 CLTCL1P53675 1640 aa10.76□□□□□ -0.69
DEPDC1B-201ENST00000265036 TRIM26Q12899 539 aaPredicted RBP10.76□□□□□ -0.69
DEPDC1B-201ENST00000265036 ADGRB3O60242 1522 aa10.76□□□□□ -0.69
DEPDC1B-201ENST00000265036 MPHOSPH9Q99550 1183 aa10.76□□□□□ -0.69
DEPDC1B-201ENST00000265036 NUTM2DQ5VT03 806 aaPredicted RBP10.75□□□□□ -0.69
DEPDC1B-201ENST00000265036 PLA2R1Q13018 1463 aa10.75□□□□□ -0.69
DEPDC1B-201ENST00000265036 TRPM2O94759 1503 aa10.74□□□□□ -0.69
DEPDC1B-201ENST00000265036 NEURL4Q96JN8 1562 aa10.74□□□□□ -0.69
DEPDC1B-201ENST00000265036 THEMISQ8N1K5 641 aaPredicted RBP10.74□□□□□ -0.69
DEPDC1B-201ENST00000265036 TMEM131LA2VDJ0 1609 aa10.73□□□□□ -0.69
DEPDC1B-201ENST00000265036 PTPRTO14522 1441 aa10.72□□□□□ -0.69
DEPDC1B-201ENST00000265036 PCGF6Q9BYE7 350 aa10.72□□□□□ -0.69
DEPDC1B-201ENST00000265036 SLC52A1Q9NWF4 448 aa10.72□□□□□ -0.69
DEPDC1B-201ENST00000265036 LTKP29376 864 aa10.72□□□□□ -0.69
DEPDC1B-201ENST00000265036 KIF1BO60333 1816 aa10.71□□□□□ -0.69
DEPDC1B-201ENST00000265036 SCAF11Q99590 1463 aaKnown RBP10.71□□□□□ -0.7
DEPDC1B-201ENST00000265036 TMEM2Q9UHN6 1383 aa10.7□□□□□ -0.7
DEPDC1B-201ENST00000265036 IQGAP1P46940 1657 aa10.7□□□□□ -0.7
DEPDC1B-201ENST00000265036 ZNF326Q5BKZ1 582 aaKnown RBP10.7□□□□□ -0.7
DEPDC1B-201ENST00000265036 ANKLE2Q86XL3 938 aa10.7□□□□□ -0.7
DEPDC1B-201ENST00000265036 KDM5AP29375 1690 aaKnown RBP10.7□□□□□ -0.7
DEPDC1B-201ENST00000265036 TXNDC2Q86VQ3 553 aa10.69□□□□□ -0.7
DEPDC1B-201ENST00000265036 SLIT1O75093 1534 aa10.69□□□□□ -0.7
DEPDC1B-201ENST00000265036 CCDC144AA2RUR9 1427 aa10.69□□□□□ -0.7
DEPDC1B-201ENST00000265036 ARHGAP23Q9P227 1491 aa10.69□□□□□ -0.7
DEPDC1B-201ENST00000265036 PPP1R15AO75807 674 aaPredicted RBP10.68□□□□□ -0.7
DEPDC1B-201ENST00000265036 NPHP4O75161 1426 aaPredicted RBP10.68□□□□□ -0.7
DEPDC1B-201ENST00000265036 RIMS2Q9UQ26 1411 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms