RNA–Protein interactions for RNA: ENST00000264694.12

SNX25-201, Transcript of sorting nexin 25, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNX25, Length 3,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-201ENST00000264694 PDS5BQ9NTI5 1447 aa17.46■□□□□ 0.39
SNX25-201ENST00000264694 DAXXQ9UER7 740 aaPredicted RBP17.46■□□□□ 0.39
SNX25-201ENST00000264694 FRAT1Q92837 279 aaPredicted RBP17.45■□□□□ 0.38
SNX25-201ENST00000264694 UHRF1BP1Q6BDS2 1440 aa17.45■□□□□ 0.38
SNX25-201ENST00000264694 ANKRD50Q9ULJ7 1429 aa17.44■□□□□ 0.38
SNX25-201ENST00000264694 DNAJC5BQ9UF47 199 aa17.44■□□□□ 0.38
SNX25-201ENST00000264694 ANKRD30AQ9BXX3 1397 aa17.44■□□□□ 0.38
SNX25-201ENST00000264694 PARD3Q8TEW0 1356 aa17.43■□□□□ 0.38
SNX25-201ENST00000264694 RGL3Q3MIN7 710 aa17.42■□□□□ 0.38
SNX25-201ENST00000264694 KIAA0586Q9BVV6 1533 aa17.42■□□□□ 0.38
SNX25-201ENST00000264694 NBPF1Q3BBV0 1214 aa17.41■□□□□ 0.38
SNX25-201ENST00000264694 UBE2Q2Q8WVN8 375 aa17.41■□□□□ 0.38
SNX25-201ENST00000264694 PER1O15534 1290 aaPredicted RBP17.4■□□□□ 0.38
SNX25-201ENST00000264694 TARBP1Q13395 1621 aaKnown RBP17.39■□□□□ 0.37
SNX25-201ENST00000264694 GPATCH8Q9UKJ3 1502 aaKnown RBP17.39■□□□□ 0.37
SNX25-201ENST00000264694 RGS3P49796 1198 aa17.39■□□□□ 0.37
SNX25-201ENST00000264694 EIF5BO60841 1220 aaKnown RBP17.38■□□□□ 0.37
SNX25-201ENST00000264694 TROQ12816 1431 aaPredicted RBP17.37■□□□□ 0.37
SNX25-201ENST00000264694 FRAT2O75474 233 aaPredicted RBP17.37■□□□□ 0.37
SNX25-201ENST00000264694 PANK3Q9H999 370 aa17.37■□□□□ 0.37
SNX25-201ENST00000264694 DISP1Q96F81 1524 aa17.37■□□□□ 0.37
SNX25-201ENST00000264694 ADAMTS12P58397 1594 aa17.36■□□□□ 0.37
SNX25-201ENST00000264694 PBRM1Q86U86 1689 aa17.36■□□□□ 0.37
SNX25-201ENST00000264694 KDM2BQ8NHM5 1336 aa17.35■□□□□ 0.37
SNX25-201ENST00000264694 ADGRL2O95490 1459 aa17.35■□□□□ 0.37
SNX25-201ENST00000264694 ADAMTS8Q9UP79 889 aa17.35■□□□□ 0.37
SNX25-201ENST00000264694 C8orf34Q49A92 452 aa17.34■□□□□ 0.37
SNX25-201ENST00000264694 ADGBQ8N7X0 1667 aa17.34■□□□□ 0.37
SNX25-201ENST00000264694 E9PCH4 1651 aa17.34■□□□□ 0.37
SNX25-201ENST00000264694 RAPGEF6Q8TEU7 1601 aa17.34■□□□□ 0.37
SNX25-201ENST00000264694 FAM161AQ3B820 660 aa17.34■□□□□ 0.37
SNX25-201ENST00000264694 ARHGEF12Q9NZN5 1544 aa17.33■□□□□ 0.37
SNX25-201ENST00000264694 KIAA0556O60303 1618 aa17.33■□□□□ 0.37
SNX25-201ENST00000264694 DISP3Q9P2K9 1392 aa17.33■□□□□ 0.36
SNX25-201ENST00000264694 CENPQQ7L2Z9 268 aaPredicted RBP17.32■□□□□ 0.36
SNX25-201ENST00000264694 PLB1Q6P1J6 1458 aa17.32■□□□□ 0.36
SNX25-201ENST00000264694 TSPY4P0CV99 314 aa17.31■□□□□ 0.36
SNX25-201ENST00000264694 TSPY10P0CW01 314 aa17.31■□□□□ 0.36
SNX25-201ENST00000264694 BLMP54132 1417 aaPredicted RBP17.31■□□□□ 0.36
SNX25-201ENST00000264694 HNRNPMP52272 730 aaKnown RBP eCLIP17.31■□□□□ 0.361e-6■■■■□ 20
SNX25-201ENST00000264694 C9orf84Q5VXU9 1444 aa17.31■□□□□ 0.36
SNX25-201ENST00000264694 PLEKHH1Q9ULM0 1364 aa17.28■□□□□ 0.36
SNX25-201ENST00000264694 DUSP27Q5VZP5 1158 aa17.28■□□□□ 0.36
SNX25-201ENST00000264694 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.27■□□□□ 0.36
SNX25-201ENST00000264694 TESK2Q96S53 571 aa17.27■□□□□ 0.36
SNX25-201ENST00000264694 PRAG1Q86YV5 1406 aa17.26■□□□□ 0.35
SNX25-201ENST00000264694 WDR43Q15061 677 aaKnown RBP eCLIP17.26■□□□□ 0.35
SNX25-201ENST00000264694 ITSN2Q9NZM3 1697 aa17.26■□□□□ 0.35
SNX25-201ENST00000264694 CROCC2H7BZ55 1655 aa17.26■□□□□ 0.35
SNX25-201ENST00000264694 ZNF608Q9ULD9 1512 aaPredicted RBP17.26■□□□□ 0.35
SNX25-201ENST00000264694 ZMYM4Q5VZL5 1548 aa17.25■□□□□ 0.35
SNX25-201ENST00000264694 CEP170Q5SW79 1584 aa17.25■□□□□ 0.35
SNX25-201ENST00000264694 CCDC146Q8IYE0 955 aa17.23■□□□□ 0.35
SNX25-201ENST00000264694 CCDC144AA2RUR9 1427 aa17.23■□□□□ 0.35
SNX25-201ENST00000264694 PLEKHD1A6NEE1 506 aa17.23■□□□□ 0.35
SNX25-201ENST00000264694 KDM5DQ9BY66 1539 aa17.23■□□□□ 0.35
SNX25-201ENST00000264694 GOLGA2Q08379 1002 aa17.23■□□□□ 0.35
SNX25-201ENST00000264694 COL17A1Q9UMD9 1497 aaPredicted RBP17.23■□□□□ 0.35
SNX25-201ENST00000264694 TMF1P82094 1093 aa17.22■□□□□ 0.35
SNX25-201ENST00000264694 FBLN2P98095 1184 aa17.22■□□□□ 0.35
SNX25-201ENST00000264694 ERBINQ96RT1 1412 aa17.21■□□□□ 0.35
SNX25-201ENST00000264694 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.21■□□□□ 0.35
SNX25-201ENST00000264694 PPP2R1AP30153 589 aa17.2■□□□□ 0.34
SNX25-201ENST00000264694 BCAR3O75815 825 aa17.2■□□□□ 0.34
SNX25-201ENST00000264694 POGKQ9P215 609 aa17.2■□□□□ 0.34
SNX25-201ENST00000264694 PLEKHH2Q8IVE3 1493 aa17.19■□□□□ 0.34
SNX25-201ENST00000264694 SPINK5Q9NQ38 1064 aaPredicted RBP17.19■□□□□ 0.34
SNX25-201ENST00000264694 TRPM1Q7Z4N2 1603 aa17.19■□□□□ 0.34
SNX25-201ENST00000264694 ARXQ96QS3 562 aa17.19■□□□□ 0.34
SNX25-201ENST00000264694 SLKQ9H2G2 1235 aaPredicted RBP17.19■□□□□ 0.34
SNX25-201ENST00000264694 KNSTRNQ9Y448 316 aa17.19■□□□□ 0.34
SNX25-201ENST00000264694 PTPRGP23470 1445 aa17.17■□□□□ 0.34
SNX25-201ENST00000264694 SEC24BO95487 1268 aa17.17■□□□□ 0.34
SNX25-201ENST00000264694 IGHDP01880 384 aa17.17■□□□□ 0.34
SNX25-201ENST00000264694 CDC42BPAQ5VT25 1732 aa17.17■□□□□ 0.34
SNX25-201ENST00000264694 A2MP01023 1474 aa17.17■□□□□ 0.34
SNX25-201ENST00000264694 INSRP06213 1382 aa17.16■□□□□ 0.34
SNX25-201ENST00000264694 SLFN5Q08AF3 891 aa17.16■□□□□ 0.34
SNX25-201ENST00000264694 FAM135AQ9P2D6 1515 aa17.16■□□□□ 0.34
SNX25-201ENST00000264694 ZNF521Q96K83 1311 aa17.15■□□□□ 0.34
SNX25-201ENST00000264694 GPRASP1Q5JY77 1395 aa17.15■□□□□ 0.34
SNX25-201ENST00000264694 GRIN2AQ12879 1464 aa17.15■□□□□ 0.34
SNX25-201ENST00000264694 SHANK2Q9UPX8 1470 aa17.15■□□□□ 0.34
SNX25-201ENST00000264694 CHMP7Q8WUX9 453 aaPredicted RBP17.15■□□□□ 0.34
SNX25-201ENST00000264694 APAF1O14727 1248 aa17.14■□□□□ 0.33
SNX25-201ENST00000264694 USP19O94966 1318 aa17.14■□□□□ 0.33
SNX25-201ENST00000264694 FAM43AQ8N2R8 423 aa17.13■□□□□ 0.33
SNX25-201ENST00000264694 MAGI2Q86UL8 1455 aa17.13■□□□□ 0.33
SNX25-201ENST00000264694 PLA2R1Q13018 1463 aa17.13■□□□□ 0.33
SNX25-201ENST00000264694 ADCY10Q96PN6 1610 aa17.12■□□□□ 0.33
SNX25-201ENST00000264694 DMRT2Q9Y5R5 561 aa17.11■□□□□ 0.33
SNX25-201ENST00000264694 AMER1Q5JTC6 1135 aaPredicted RBP17.11■□□□□ 0.33
SNX25-201ENST00000264694 EIF4G3O43432 1585 aaKnown RBP17.11■□□□□ 0.33
SNX25-201ENST00000264694 ABCC10Q5T3U5 1492 aa17.11■□□□□ 0.33
SNX25-201ENST00000264694 MAGI1Q96QZ7 1491 aaPredicted RBP17.11■□□□□ 0.33
SNX25-201ENST00000264694 PRDM15P57071 1507 aaPredicted RBP17.1■□□□□ 0.33
SNX25-201ENST00000264694 JPH4Q96JJ6 628 aa17.1■□□□□ 0.33
SNX25-201ENST00000264694 PANK1Q8TE04 598 aa17.09■□□□□ 0.33
SNX25-201ENST00000264694 COG6Q9Y2V7 657 aa17.09■□□□□ 0.33
SNX25-201ENST00000264694 CANXP27824 592 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms