RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 FBXO31Q5XUX0 539 aaPredicted RBP24.94■■□□□ 1.58
USE1-201ENST00000263897 KDM5DQ9BY66 1539 aa24.94■■□□□ 1.58
USE1-201ENST00000263897 DAPK1P53355 1430 aa24.94■■□□□ 1.58
USE1-201ENST00000263897 RRP7BPQ9NSQ0 103 aa24.93■■□□□ 1.58
USE1-201ENST00000263897 SHANK2Q9UPX8 1470 aa24.93■■□□□ 1.58
USE1-201ENST00000263897 DUOX2Q9NRD8 1548 aa24.92■■□□□ 1.58
USE1-201ENST00000263897 DNMT1P26358 1616 aaKnown RBP24.91■■□□□ 1.58
USE1-201ENST00000263897 FBXO41Q8TF61 875 aa24.9■■□□□ 1.58
USE1-201ENST00000263897 CROCC2H7BZ55 1655 aa24.9■■□□□ 1.58
USE1-201ENST00000263897 KIF15Q9NS87 1388 aa24.9■■□□□ 1.58
USE1-201ENST00000263897 RNF17Q9BXT8 1623 aaKnown RBP24.9■■□□□ 1.58
USE1-201ENST00000263897 EIF2AK4Q9P2K8 1649 aaKnown RBP24.9■■□□□ 1.58
USE1-201ENST00000263897 NCOA1Q15788 1441 aa24.89■■□□□ 1.58
USE1-201ENST00000263897 CHIC2Q9UKJ5 165 aa24.89■■□□□ 1.58
USE1-201ENST00000263897 PZPP20742 1482 aa24.89■■□□□ 1.57
USE1-201ENST00000263897 PTPRTO14522 1441 aa24.87■■□□□ 1.57
USE1-201ENST00000263897 CAMSAP1Q5T5Y3 1602 aa24.87■■□□□ 1.57
USE1-201ENST00000263897 MYO3AQ8NEV4 1616 aa24.87■■□□□ 1.57
USE1-201ENST00000263897 FAM50AQ14320 339 aaKnown RBP24.87■■□□□ 1.57
USE1-201ENST00000263897 TNRQ92752 1358 aa24.86■■□□□ 1.57
USE1-201ENST00000263897 ZNF142P52746 1687 aaPredicted RBP24.85■■□□□ 1.57
USE1-201ENST00000263897 CEP170BQ9Y4F5 1589 aaPredicted RBP24.85■■□□□ 1.57
USE1-201ENST00000263897 ANKRD30AQ9BXX3 1397 aa24.85■■□□□ 1.57
USE1-201ENST00000263897 CERKQ8TCT0 537 aa24.85■■□□□ 1.57
USE1-201ENST00000263897 A2ML1A8K2U0 1454 aa24.83■■□□□ 1.57
USE1-201ENST00000263897 ABCC3O15438 1527 aa24.83■■□□□ 1.57
USE1-201ENST00000263897 ERBINQ96RT1 1412 aa24.83■■□□□ 1.57
USE1-201ENST00000263897 NCKAP5LQ9HCH0 1330 aa24.83■■□□□ 1.56
USE1-201ENST00000263897 MROH1Q8NDA8 1641 aa24.83■■□□□ 1.56
USE1-201ENST00000263897 PKD2Q13563 968 aa24.81■■□□□ 1.56
USE1-201ENST00000263897 PLA2R1Q13018 1463 aa24.8■■□□□ 1.56
USE1-201ENST00000263897 ZC3H13Q5T200 1668 aaKnown RBP24.8■■□□□ 1.56
USE1-201ENST00000263897 PPARGC1BQ86YN6 1023 aaKnown RBP24.77■■□□□ 1.56
USE1-201ENST00000263897 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.77■■□□□ 1.56
USE1-201ENST00000263897 ADGRL2O95490 1459 aa24.75■■□□□ 1.55
USE1-201ENST00000263897 CEP152O94986 1710 aa24.75■■□□□ 1.55
USE1-201ENST00000263897 THEMISQ8N1K5 641 aaPredicted RBP24.74■■□□□ 1.55
USE1-201ENST00000263897 NLRP1Q9C000 1473 aa24.74■■□□□ 1.55
USE1-201ENST00000263897 PRDM15P57071 1507 aaPredicted RBP24.74■■□□□ 1.55
USE1-201ENST00000263897 CFAP65Q6ZU64 1925 aaKnown RBP24.74■■□□□ 1.55
USE1-201ENST00000263897 KANK1Q14678 1352 aa24.72■■□□□ 1.55
USE1-201ENST00000263897 SPATA31D1Q6ZQQ2 1576 aa24.71■■□□□ 1.55
USE1-201ENST00000263897 DEPDC5O75140 1603 aa24.71■■□□□ 1.55
USE1-201ENST00000263897 ERVK-7P63135 1459 aa24.7■■□□□ 1.55
USE1-201ENST00000263897 ARHGAP31Q2M1Z3 1444 aa24.7■■□□□ 1.55
USE1-201ENST00000263897 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.67■■□□□ 1.54
USE1-201ENST00000263897 UGGT1Q9NYU2 1555 aa24.67■■□□□ 1.54
USE1-201ENST00000263897 ANKLE2Q86XL3 938 aa24.67■■□□□ 1.54
USE1-201ENST00000263897 LTBP4Q8N2S1 1624 aa24.66■■□□□ 1.54
USE1-201ENST00000263897 ANKRD50Q9ULJ7 1429 aa24.66■■□□□ 1.54
USE1-201ENST00000263897 VWDEQ8N2E2 1590 aa24.63■■□□□ 1.53
USE1-201ENST00000263897 ZNF335Q9H4Z2 1342 aaPredicted RBP24.62■■□□□ 1.53
USE1-201ENST00000263897 LMTK2Q8IWU2 1503 aa24.62■■□□□ 1.53
USE1-201ENST00000263897 ROCK1Q13464 1354 aa24.61■■□□□ 1.53
USE1-201ENST00000263897 ITGAEP38570 1179 aa24.6■■□□□ 1.53
USE1-201ENST00000263897 POLR1AO95602 1720 aaPredicted RBP24.59■■□□□ 1.53
USE1-201ENST00000263897 NEURL4Q96JN8 1562 aa24.58■■□□□ 1.52
USE1-201ENST00000263897 MED14O60244 1454 aa24.55■■□□□ 1.52
USE1-201ENST00000263897 UBR1Q8IWV7 1749 aa24.54■■□□□ 1.52
USE1-201ENST00000263897 NPHP4O75161 1426 aaPredicted RBP24.53■■□□□ 1.52
USE1-201ENST00000263897 IQSEC2Q5JU85 1478 aa24.53■■□□□ 1.52
USE1-201ENST00000263897 IDI1Q13907 227 aa24.53■■□□□ 1.52
USE1-201ENST00000263897 EFCAB6Q5THR3 1501 aa24.51■■□□□ 1.51
USE1-201ENST00000263897 NOS1P29475 1434 aa24.51■■□□□ 1.51
USE1-201ENST00000263897 STAG3Q9UJ98 1225 aa24.5■■□□□ 1.51
USE1-201ENST00000263897 TXNDC2Q86VQ3 553 aa24.49■■□□□ 1.51
USE1-201ENST00000263897 RRBP1Q9P2E9 1410 aaKnown RBP24.49■■□□□ 1.51
USE1-201ENST00000263897 LTKP29376 864 aa24.48■■□□□ 1.51
USE1-201ENST00000263897 SLC52A1Q9NWF4 448 aa24.48■■□□□ 1.51
USE1-201ENST00000263897 PIK3C2BO00750 1634 aa24.47■■□□□ 1.51
USE1-201ENST00000263897 RPRD2Q5VT52 1461 aaKnown RBP24.47■■□□□ 1.51
USE1-201ENST00000263897 ARHGAP23Q9P227 1491 aa24.47■■□□□ 1.51
USE1-201ENST00000263897 UNC13BO14795 1591 aa24.46■■□□□ 1.51
USE1-201ENST00000263897 SLIT1O75093 1534 aa24.46■■□□□ 1.51
USE1-201ENST00000263897 EID1Q9Y6B2 187 aa24.46■■□□□ 1.51
USE1-201ENST00000263897 SYNMO15061 1565 aa24.46■■□□□ 1.51
USE1-201ENST00000263897 TET3O43151 1660 aa24.45■■□□□ 1.5
USE1-201ENST00000263897 IQGAP1P46940 1657 aa24.45■■□□□ 1.5
USE1-201ENST00000263897 SCAF11Q99590 1463 aaKnown RBP24.45■■□□□ 1.5
USE1-201ENST00000263897 TMEM2Q9UHN6 1383 aa24.43■■□□□ 1.5
USE1-201ENST00000263897 NUP155O75694 1391 aa24.42■■□□□ 1.5
USE1-201ENST00000263897 KDM5AP29375 1690 aaKnown RBP24.42■■□□□ 1.5
USE1-201ENST00000263897 CPS1P31327 1500 aa24.4■■□□□ 1.5
USE1-201ENST00000263897 GCC2Q8IWJ2 1684 aa24.4■■□□□ 1.5
USE1-201ENST00000263897 UBAP1LF5GYI3 381 aa24.39■■□□□ 1.49
USE1-201ENST00000263897 IQGAP3Q86VI3 1631 aa24.38■■□□□ 1.49
USE1-201ENST00000263897 E9PCH4 1651 aa24.35■■□□□ 1.49
USE1-201ENST00000263897 ADGRB3O60242 1522 aa24.34■■□□□ 1.49
USE1-201ENST00000263897 NAIPQ13075 1403 aa24.32■■□□□ 1.48
USE1-201ENST00000263897 STRCP1A6NGW2 1772 aa24.31■■□□□ 1.48
USE1-201ENST00000263897 TOM1O60784 492 aa24.29■■□□□ 1.48
USE1-201ENST00000263897 HDGFP51858 240 aaKnown RBP24.29■■□□□ 1.48
USE1-201ENST00000263897 CHGAP10645 457 aaKnown RBP24.28■■□□□ 1.48
USE1-201ENST00000263897 MYO5BQ9ULV0 1848 aa24.27■■□□□ 1.48
USE1-201ENST00000263897 TMEM131LA2VDJ0 1609 aa24.27■■□□□ 1.48
USE1-201ENST00000263897 LRRC7Q96NW7 1537 aa24.26■■□□□ 1.47
USE1-201ENST00000263897 SLC26A8Q96RN1 970 aa24.26■■□□□ 1.47
USE1-201ENST00000263897 ZFYVE9O95405 1425 aa24.25■■□□□ 1.47
USE1-201ENST00000263897 BCANQ96GW7 911 aa24.24■■□□□ 1.47
USE1-201ENST00000263897 HFM1A2PYH4 1435 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms