RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 GGT6Q6P531 493 aa27.77■■■□□ 2.04
SDF4-201ENST00000263741 ANKRD50Q9ULJ7 1429 aa27.75■■■□□ 2.03
SDF4-201ENST00000263741 DEPDC5O75140 1603 aa27.74■■■□□ 2.03
SDF4-201ENST00000263741 CEP152O94986 1710 aa27.73■■■□□ 2.03
SDF4-201ENST00000263741 NAIPQ13075 1403 aa27.7■■■□□ 2.03
SDF4-201ENST00000263741 PRDM15P57071 1507 aaPredicted RBP27.68■■■□□ 2.02
SDF4-201ENST00000263741 C3P01024 1663 aa27.67■■■□□ 2.02
SDF4-201ENST00000263741 HFM1A2PYH4 1435 aa27.67■■■□□ 2.02
SDF4-201ENST00000263741 PLPPR3Q6T4P5 718 aa27.67■■■□□ 2.02
SDF4-201ENST00000263741 PTPRMP28827 1452 aa27.66■■■□□ 2.02
SDF4-201ENST00000263741 KDM5DQ9BY66 1539 aa27.65■■■□□ 2.02
SDF4-201ENST00000263741 UNC13BO14795 1591 aa27.65■■■□□ 2.02
SDF4-201ENST00000263741 MROH2AA6NES4 1674 aa27.65■■■□□ 2.02
SDF4-201ENST00000263741 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.64■■■□□ 2.026e-9■■□□□ 12.6
SDF4-201ENST00000263741 ZC3H13Q5T200 1668 aaKnown RBP27.63■■■□□ 2.01
SDF4-201ENST00000263741 ABCC3O15438 1527 aa27.62■■■□□ 2.01
SDF4-201ENST00000263741 ESF1Q9H501 851 aaKnown RBP27.61■■■□□ 2.01
SDF4-201ENST00000263741 CAMSAP1Q5T5Y3 1602 aa27.6■■■□□ 2.01
SDF4-201ENST00000263741 CFAP65Q6ZU64 1925 aaKnown RBP27.59■■■□□ 2.01
SDF4-201ENST00000263741 CEBPAP49715 358 aaPredicted RBP27.58■■■□□ 2.01
SDF4-201ENST00000263741 VWDEQ8N2E2 1590 aa27.58■■■□□ 2.01
SDF4-201ENST00000263741 CNTLNQ9NXG0 1405 aa27.57■■■□□ 2
SDF4-201ENST00000263741 WASHC2CQ9Y4E1 1318 aa27.57■■■□□ 2
SDF4-201ENST00000263741 FAM135AQ9P2D6 1515 aa27.56■■■□□ 2
SDF4-201ENST00000263741 IQGAP3Q86VI3 1631 aa27.53■■■□□ 2
SDF4-201ENST00000263741 ZMYM3Q14202 1370 aa27.52■■■□□ 2
SDF4-201ENST00000263741 KANK1Q14678 1352 aa27.51■■■□□ 2
SDF4-201ENST00000263741 PPP6R1Q9UPN7 881 aa27.51■■□□□ 1.99
SDF4-201ENST00000263741 SETD5Q9C0A6 1442 aa27.49■■□□□ 1.99
SDF4-201ENST00000263741 TET3O43151 1660 aa27.49■■□□□ 1.99
SDF4-201ENST00000263741 TRIM26Q12899 539 aaPredicted RBP27.48■■□□□ 1.99
SDF4-201ENST00000263741 NUP155O75694 1391 aa27.47■■□□□ 1.99
SDF4-201ENST00000263741 EFCAB6Q5THR3 1501 aa27.47■■□□□ 1.99
SDF4-201ENST00000263741 LMTK2Q8IWU2 1503 aa27.47■■□□□ 1.99
SDF4-201ENST00000263741 AEBP2Q6ZN18 517 aaPredicted RBP27.47■■□□□ 1.99
SDF4-201ENST00000263741 RAB3GAP2Q9H2M9 1393 aa27.46■■□□□ 1.99
SDF4-201ENST00000263741 E9PCH4 1651 aa27.45■■□□□ 1.98
SDF4-201ENST00000263741 PZPP20742 1482 aa27.44■■□□□ 1.98
SDF4-201ENST00000263741 PREX1Q8TCU6 1659 aa27.44■■□□□ 1.98
SDF4-201ENST00000263741 NPATQ14207 1427 aa27.42■■□□□ 1.98
SDF4-201ENST00000263741 TRIM52Q96A61 297 aa27.42■■□□□ 1.98
SDF4-201ENST00000263741 FBXO31Q5XUX0 539 aaPredicted RBP27.41■■□□□ 1.98
SDF4-201ENST00000263741 MYO3AQ8NEV4 1616 aa27.38■■□□□ 1.97
SDF4-201ENST00000263741 SETD1BQ9UPS6 1966 aaKnown RBP27.37■■□□□ 1.97
SDF4-201ENST00000263741 ERVK-7P63135 1459 aa27.36■■□□□ 1.97
SDF4-201ENST00000263741 SPATA31D1Q6ZQQ2 1576 aa27.35■■□□□ 1.97
SDF4-201ENST00000263741 ARHGAP31Q2M1Z3 1444 aa27.35■■□□□ 1.97
SDF4-201ENST00000263741 SYNMO15061 1565 aa27.31■■□□□ 1.96
SDF4-201ENST00000263741 SPHKAPQ2M3C7 1700 aa27.3■■□□□ 1.96
SDF4-201ENST00000263741 TNRQ92752 1358 aa27.3■■□□□ 1.96
SDF4-201ENST00000263741 RPRD2Q5VT52 1461 aaKnown RBP27.28■■□□□ 1.96
SDF4-201ENST00000263741 LMTK3Q96Q04 1460 aa27.28■■□□□ 1.96
SDF4-201ENST00000263741 ZNF142P52746 1687 aaPredicted RBP27.28■■□□□ 1.96
SDF4-201ENST00000263741 SLC4A1APQ9BWU0 796 aaKnown RBP27.27■■□□□ 1.96
SDF4-201ENST00000263741 UGGT1Q9NYU2 1555 aa27.26■■□□□ 1.95
SDF4-201ENST00000263741 UHRF1BP1Q6BDS2 1440 aa27.26■■□□□ 1.95
SDF4-201ENST00000263741 CEP170BQ9Y4F5 1589 aaPredicted RBP27.25■■□□□ 1.95
SDF4-201ENST00000263741 PCGF6Q9BYE7 350 aa27.25■■□□□ 1.95
SDF4-201ENST00000263741 NOS1P29475 1434 aa27.24■■□□□ 1.95
SDF4-201ENST00000263741 PKD2Q13563 968 aa27.23■■□□□ 1.95
SDF4-201ENST00000263741 FOXD1Q16676 465 aa27.23■■□□□ 1.95
SDF4-201ENST00000263741 PIK3C2BO00750 1634 aa27.22■■□□□ 1.95
SDF4-201ENST00000263741 MPHOSPH9Q99550 1183 aa27.21■■□□□ 1.95
SDF4-201ENST00000263741 MYO5BQ9ULV0 1848 aa27.19■■□□□ 1.94
SDF4-201ENST00000263741 HSPA2P54652 639 aa27.18■■□□□ 1.94
SDF4-201ENST00000263741 UBR1Q8IWV7 1749 aa27.18■■□□□ 1.94
SDF4-201ENST00000263741 A2ML1A8K2U0 1454 aa27.17■■□□□ 1.94
SDF4-201ENST00000263741 NLRP1Q9C000 1473 aa27.17■■□□□ 1.94
SDF4-201ENST00000263741 CLTCL1P53675 1640 aa27.15■■□□□ 1.94
SDF4-201ENST00000263741 HRCP23327 699 aa27.15■■□□□ 1.94
SDF4-201ENST00000263741 TRPM2O94759 1503 aa27.15■■□□□ 1.94
SDF4-201ENST00000263741 PLA2R1Q13018 1463 aa27.14■■□□□ 1.93
SDF4-201ENST00000263741 PTPRTO14522 1441 aa27.13■■□□□ 1.93
SDF4-201ENST00000263741 ACIN1Q9UKV3 1341 aaKnown RBP27.1■■□□□ 1.93
SDF4-201ENST00000263741 IDI1Q13907 227 aa27.1■■□□□ 1.93
SDF4-201ENST00000263741 ADGRB3O60242 1522 aa27.09■■□□□ 1.93
SDF4-201ENST00000263741 TMEM131LA2VDJ0 1609 aa27.07■■□□□ 1.92
SDF4-201ENST00000263741 KIF1BO60333 1816 aa27.07■■□□□ 1.92
SDF4-201ENST00000263741 KDM5AP29375 1690 aaKnown RBP27.06■■□□□ 1.92
SDF4-201ENST00000263741 STRCQ7RTU9 1775 aa27.06■■□□□ 1.92
SDF4-201ENST00000263741 POLR1AO95602 1720 aaPredicted RBP27.03■■□□□ 1.92
SDF4-201ENST00000263741 SLC52A1Q9NWF4 448 aa27.03■■□□□ 1.92
SDF4-201ENST00000263741 CHGAP10645 457 aaKnown RBP27.01■■□□□ 1.91
SDF4-201ENST00000263741 STAG3Q9UJ98 1225 aa27.01■■□□□ 1.91
SDF4-201ENST00000263741 DHX57Q6P158 1386 aaKnown RBP26.98■■□□□ 1.91
SDF4-201ENST00000263741 CCDC144AA2RUR9 1427 aa26.98■■□□□ 1.91
SDF4-201ENST00000263741 THEMISQ8N1K5 641 aaPredicted RBP26.95■■□□□ 1.9
SDF4-201ENST00000263741 ANKRD30BQ9BXX2 1392 aa26.95■■□□□ 1.9
SDF4-201ENST00000263741 NEURL4Q96JN8 1562 aa26.94■■□□□ 1.9
SDF4-201ENST00000263741 SLIT1O75093 1534 aa26.93■■□□□ 1.9
SDF4-201ENST00000263741 NCKAP5LQ9HCH0 1330 aa26.92■■□□□ 1.9
SDF4-201ENST00000263741 ARHGAP23Q9P227 1491 aa26.92■■□□□ 1.9
SDF4-201ENST00000263741 TMEM2Q9UHN6 1383 aa26.9■■□□□ 1.9
SDF4-201ENST00000263741 SENP3Q9H4L4 574 aaPredicted RBP26.87■■□□□ 1.89
SDF4-201ENST00000263741 SCAF11Q99590 1463 aaKnown RBP26.87■■□□□ 1.89
SDF4-201ENST00000263741 NUTM2DQ5VT03 806 aaPredicted RBP26.86■■□□□ 1.89
SDF4-201ENST00000263741 ZFYVE9O95405 1425 aa26.86■■□□□ 1.89
SDF4-201ENST00000263741 RIMS2Q9UQ26 1411 aa26.86■■□□□ 1.89
SDF4-201ENST00000263741 LTKP29376 864 aa26.86■■□□□ 1.89
SDF4-201ENST00000263741 PPLO60437 1756 aa26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms