RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 ABCA6Q8N139 1617 aa14.46□□□□□ -0.1
SNRNP40-201ENST00000263694 DUOX2Q9NRD8 1548 aa14.44□□□□□ -0.1
SNRNP40-201ENST00000263694 HRCP23327 699 aa14.44□□□□□ -0.1
SNRNP40-201ENST00000263694 CCER1Q8TC90 406 aaPredicted RBP14.43□□□□□ -0.1
SNRNP40-201ENST00000263694 ZMYM4Q5VZL5 1548 aa14.43□□□□□ -0.1
SNRNP40-201ENST00000263694 DIP2CQ9Y2E4 1556 aa14.42□□□□□ -0.1
SNRNP40-201ENST00000263694 DHX57Q6P158 1386 aaKnown RBP14.42□□□□□ -0.1
SNRNP40-201ENST00000263694 DHX29Q7Z478 1369 aaKnown RBP14.42□□□□□ -0.1
SNRNP40-201ENST00000263694 C1QBPQ07021 282 aaKnown RBP14.42□□□□□ -0.1
SNRNP40-201ENST00000263694 CNKSR2Q8WXI2 1034 aa14.41□□□□□ -0.1
SNRNP40-201ENST00000263694 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.41□□□□□ -0.15e-13■■■■□ 23.4
SNRNP40-201ENST00000263694 A2MP01023 1474 aa14.41□□□□□ -0.1
SNRNP40-201ENST00000263694 KIF3BO15066 747 aa14.39□□□□□ -0.11
SNRNP40-201ENST00000263694 RNF216Q9NWF9 866 aaPredicted RBP14.39□□□□□ -0.11
SNRNP40-201ENST00000263694 ERBINQ96RT1 1412 aa14.39□□□□□ -0.11
SNRNP40-201ENST00000263694 MAGI2Q86UL8 1455 aa14.38□□□□□ -0.11
SNRNP40-201ENST00000263694 NUP155O75694 1391 aa14.37□□□□□ -0.11
SNRNP40-201ENST00000263694 ATP10AO60312 1499 aa14.37□□□□□ -0.11
SNRNP40-201ENST00000263694 MPHOSPH9Q99550 1183 aa14.36□□□□□ -0.11
SNRNP40-201ENST00000263694 SIGLEC1Q9BZZ2 1709 aa14.36□□□□□ -0.11
SNRNP40-201ENST00000263694 PZPP20742 1482 aa14.35□□□□□ -0.11
SNRNP40-201ENST00000263694 SLC4A1APQ9BWU0 796 aaKnown RBP14.34□□□□□ -0.11
SNRNP40-201ENST00000263694 ARHGEF40Q8TER5 1519 aa14.34□□□□□ -0.11
SNRNP40-201ENST00000263694 UNC13BO14795 1591 aa14.34□□□□□ -0.11
SNRNP40-201ENST00000263694 GGT6Q6P531 493 aa14.34□□□□□ -0.11
SNRNP40-201ENST00000263694 EIF2AK4Q9P2K8 1649 aaKnown RBP14.33□□□□□ -0.12
SNRNP40-201ENST00000263694 MROH1Q8NDA8 1641 aa14.32□□□□□ -0.12
SNRNP40-201ENST00000263694 DEPDC5O75140 1603 aa14.31□□□□□ -0.12
SNRNP40-201ENST00000263694 PKD2Q13563 968 aa14.3□□□□□ -0.12
SNRNP40-201ENST00000263694 KDM5DQ9BY66 1539 aa14.3□□□□□ -0.12
SNRNP40-201ENST00000263694 FAM135AQ9P2D6 1515 aa14.3□□□□□ -0.12
SNRNP40-201ENST00000263694 MLECQ14165 292 aa14.3□□□□□ -0.12
SNRNP40-201ENST00000263694 RNF17Q9BXT8 1623 aaKnown RBP14.29□□□□□ -0.12
SNRNP40-201ENST00000263694 BCORL1Q5H9F3 1711 aa14.29□□□□□ -0.12
SNRNP40-201ENST00000263694 ACIN1Q9UKV3 1341 aaKnown RBP14.29□□□□□ -0.12
SNRNP40-201ENST00000263694 IQGAP3Q86VI3 1631 aa14.28□□□□□ -0.12
SNRNP40-201ENST00000263694 SIN3AQ96ST3 1273 aa14.28□□□□□ -0.12
SNRNP40-201ENST00000263694 REREQ9P2R6 1566 aa14.28□□□□□ -0.12
SNRNP40-201ENST00000263694 ARID4BQ4LE39 1312 aaPredicted RBP14.28□□□□□ -0.12
SNRNP40-201ENST00000263694 CEP152O94986 1710 aa14.27□□□□□ -0.12
SNRNP40-201ENST00000263694 PRDM15P57071 1507 aaPredicted RBP14.27□□□□□ -0.13
SNRNP40-201ENST00000263694 KANK1Q14678 1352 aa14.26□□□□□ -0.13
SNRNP40-201ENST00000263694 VWDEQ8N2E2 1590 aa14.26□□□□□ -0.13
SNRNP40-201ENST00000263694 AGLP35573 1532 aa14.25□□□□□ -0.13
SNRNP40-201ENST00000263694 NEUROD1Q13562 356 aa14.25□□□□□ -0.13
SNRNP40-201ENST00000263694 CFAP65Q6ZU64 1925 aaKnown RBP14.24□□□□□ -0.13
SNRNP40-201ENST00000263694 WASHC2CQ9Y4E1 1318 aa14.24□□□□□ -0.13
SNRNP40-201ENST00000263694 ANKRD30BQ9BXX2 1392 aa14.22□□□□□ -0.13
SNRNP40-201ENST00000263694 E9PCH4 1651 aa14.22□□□□□ -0.13
SNRNP40-201ENST00000263694 ABCC3O15438 1527 aa14.22□□□□□ -0.13
SNRNP40-201ENST00000263694 CLSPNQ9HAW4 1339 aa14.22□□□□□ -0.13
SNRNP40-201ENST00000263694 TET3O43151 1660 aa14.22□□□□□ -0.13
SNRNP40-201ENST00000263694 LMTK2Q8IWU2 1503 aa14.19□□□□□ -0.14
SNRNP40-201ENST00000263694 CLTCQ00610 1675 aaKnown RBP14.19□□□□□ -0.14
SNRNP40-201ENST00000263694 CAMSAP1Q5T5Y3 1602 aa14.18□□□□□ -0.14
SNRNP40-201ENST00000263694 EFCAB6Q5THR3 1501 aa14.18□□□□□ -0.14
SNRNP40-201ENST00000263694 PLA2R1Q13018 1463 aa14.18□□□□□ -0.14
SNRNP40-201ENST00000263694 ZC3H13Q5T200 1668 aaKnown RBP14.15□□□□□ -0.14
SNRNP40-201ENST00000263694 NPATQ14207 1427 aa14.15□□□□□ -0.14
SNRNP40-201ENST00000263694 ZEB1P37275 1124 aaPredicted RBP14.14□□□□□ -0.15
SNRNP40-201ENST00000263694 FBXO31Q5XUX0 539 aaPredicted RBP14.14□□□□□ -0.15
SNRNP40-201ENST00000263694 ESF1Q9H501 851 aaKnown RBP14.14□□□□□ -0.15
SNRNP40-201ENST00000263694 SPHKAPQ2M3C7 1700 aa14.14□□□□□ -0.15
SNRNP40-201ENST00000263694 PTPRTO14522 1441 aa14.12□□□□□ -0.15
SNRNP40-201ENST00000263694 UGGT1Q9NYU2 1555 aa14.12□□□□□ -0.15
SNRNP40-201ENST00000263694 CEBPAP49715 358 aaPredicted RBP14.11□□□□□ -0.15
SNRNP40-201ENST00000263694 RPRD2Q5VT52 1461 aaKnown RBP14.11□□□□□ -0.15
SNRNP40-201ENST00000263694 FER1L4A9Z1Z3 1794 aa14.11□□□□□ -0.15
SNRNP40-201ENST00000263694 ZMYM3Q14202 1370 aa14.1□□□□□ -0.15
SNRNP40-201ENST00000263694 CCDC144AA2RUR9 1427 aa14.1□□□□□ -0.15
SNRNP40-201ENST00000263694 ARHGAP31Q2M1Z3 1444 aa14.1□□□□□ -0.15
SNRNP40-201ENST00000263694 CLTCL1P53675 1640 aa14.1□□□□□ -0.15
SNRNP40-201ENST00000263694 PREX1Q8TCU6 1659 aa14.09□□□□□ -0.15
SNRNP40-201ENST00000263694 TRPM2O94759 1503 aa14.09□□□□□ -0.15
SNRNP40-201ENST00000263694 TONSLQ96HA7 1378 aa14.08□□□□□ -0.16
SNRNP40-201ENST00000263694 MADDQ8WXG6 1647 aa14.08□□□□□ -0.16
SNRNP40-201ENST00000263694 RGL3Q3MIN7 710 aa14.08□□□□□ -0.16
SNRNP40-201ENST00000263694 L3MBTL2Q969R5 705 aa14.08□□□□□ -0.16
SNRNP40-201ENST00000263694 SYNMO15061 1565 aa14.08□□□□□ -0.16
SNRNP40-201ENST00000263694 NOS1P29475 1434 aa14.07□□□□□ -0.16
SNRNP40-201ENST00000263694 RIMS1Q86UR5 1692 aaKnown RBP14.07□□□□□ -0.16
SNRNP40-201ENST00000263694 ADAMTSL3P82987 1691 aa14.06□□□□□ -0.16
SNRNP40-201ENST00000263694 CNTLNQ9NXG0 1405 aa14.06□□□□□ -0.16
SNRNP40-201ENST00000263694 ERVK-7P63135 1459 aa14.06□□□□□ -0.16
SNRNP40-201ENST00000263694 MROH2AA6NES4 1674 aa14.05□□□□□ -0.16
SNRNP40-201ENST00000263694 C3P01024 1663 aa14.05□□□□□ -0.16
SNRNP40-201ENST00000263694 CHGAP10645 457 aaKnown RBP14.05□□□□□ -0.16
SNRNP40-201ENST00000263694 IDI1Q13907 227 aa14.04□□□□□ -0.16
SNRNP40-201ENST00000263694 PPP1R15AO75807 674 aaPredicted RBP14.03□□□□□ -0.16
SNRNP40-201ENST00000263694 TIMELESSQ9UNS1 1208 aa14.03□□□□□ -0.16
SNRNP40-201ENST00000263694 KIF1BO60333 1816 aa14.03□□□□□ -0.16
SNRNP40-201ENST00000263694 KDM2AQ9Y2K7 1162 aa14.02□□□□□ -0.16
SNRNP40-201ENST00000263694 PIK3C2BO00750 1634 aa14.02□□□□□ -0.17
SNRNP40-201ENST00000263694 SPATA31D1Q6ZQQ2 1576 aa14.02□□□□□ -0.17
SNRNP40-201ENST00000263694 SPATA31E1Q6ZUB1 1445 aa14.02□□□□□ -0.17
SNRNP40-201ENST00000263694 DCAF11Q8TEB1 546 aa14.01□□□□□ -0.17
SNRNP40-201ENST00000263694 MYO5BQ9ULV0 1848 aa14□□□□□ -0.17
SNRNP40-201ENST00000263694 TNRQ92752 1358 aa13.99□□□□□ -0.17
SNRNP40-201ENST00000263694 ZNF326Q5BKZ1 582 aaKnown RBP13.99□□□□□ -0.17
SNRNP40-201ENST00000263694 SLC52A1Q9NWF4 448 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms