RNA–Protein interactions for RNA: ENST00000262942.9

ARPC1A-201, Transcript of actin related protein 2/3 complex subunit 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARPC1A, Length 1,565 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1A-201ENST00000262942 SETD5Q9C0A6 1442 aa21.29■■□□□ 1
ARPC1A-201ENST00000262942 IQGAP3Q86VI3 1631 aa21.28■■□□□ 1
ARPC1A-201ENST00000262942 ADAMTSL3P82987 1691 aa21.28■■□□□ 1
ARPC1A-201ENST00000262942 CLTCQ00610 1675 aaKnown RBP21.28■■□□□ 1
ARPC1A-201ENST00000262942 ZC3H13Q5T200 1668 aaKnown RBP21.28■■□□□ 1
ARPC1A-201ENST00000262942 VWDEQ8N2E2 1590 aa21.27■■□□□ 1
ARPC1A-201ENST00000262942 PCGF6Q9BYE7 350 aa21.26■□□□□ 0.99
ARPC1A-201ENST00000262942 RAB3GAP2Q9H2M9 1393 aa21.25■□□□□ 0.99
ARPC1A-201ENST00000262942 MADDQ8WXG6 1647 aa21.25■□□□□ 0.99
ARPC1A-201ENST00000262942 KDM5DQ9BY66 1539 aa21.24■□□□□ 0.99
ARPC1A-201ENST00000262942 CAMSAP1Q5T5Y3 1602 aa21.23■□□□□ 0.99
ARPC1A-201ENST00000262942 RIMS1Q86UR5 1692 aaKnown RBP21.22■□□□□ 0.99
ARPC1A-201ENST00000262942 MROH2AA6NES4 1674 aa21.22■□□□□ 0.99
ARPC1A-201ENST00000262942 KIF3BO15066 747 aa21.21■□□□□ 0.99
ARPC1A-201ENST00000262942 TET3O43151 1660 aa21.2■□□□□ 0.98
ARPC1A-201ENST00000262942 CFAP65Q6ZU64 1925 aaKnown RBP21.2■□□□□ 0.98
ARPC1A-201ENST00000262942 ABCC3O15438 1527 aa21.19■□□□□ 0.98
ARPC1A-201ENST00000262942 FAM135AQ9P2D6 1515 aa21.19■□□□□ 0.98
ARPC1A-201ENST00000262942 E9PCH4 1651 aa21.18■□□□□ 0.98
ARPC1A-201ENST00000262942 C3P01024 1663 aa21.17■□□□□ 0.98
ARPC1A-201ENST00000262942 ARID4BQ4LE39 1312 aaPredicted RBP21.16■□□□□ 0.98
ARPC1A-201ENST00000262942 PZPP20742 1482 aa21.16■□□□□ 0.98
ARPC1A-201ENST00000262942 LMTK2Q8IWU2 1503 aa21.15■□□□□ 0.98
ARPC1A-201ENST00000262942 MLECQ14165 292 aa21.14■□□□□ 0.98
ARPC1A-201ENST00000262942 EFCAB6Q5THR3 1501 aa21.14■□□□□ 0.97
ARPC1A-201ENST00000262942 GGT6Q6P531 493 aa21.14■□□□□ 0.97
ARPC1A-201ENST00000262942 PREX1Q8TCU6 1659 aa21.11■□□□□ 0.97
ARPC1A-201ENST00000262942 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.1■□□□□ 0.971e-6■□□□□ 11.3
ARPC1A-201ENST00000262942 SPHKAPQ2M3C7 1700 aa21.09■□□□□ 0.97
ARPC1A-201ENST00000262942 NUP155O75694 1391 aa21.09■□□□□ 0.97
ARPC1A-201ENST00000262942 HRCP23327 699 aa21.08■□□□□ 0.97
ARPC1A-201ENST00000262942 KANK1Q14678 1352 aa21.07■□□□□ 0.96
ARPC1A-201ENST00000262942 CNTLNQ9NXG0 1405 aa21.04■□□□□ 0.96
ARPC1A-201ENST00000262942 TRIM52Q96A61 297 aa21.04■□□□□ 0.96
ARPC1A-201ENST00000262942 PPP6R1Q9UPN7 881 aa21.02■□□□□ 0.96
ARPC1A-201ENST00000262942 WASHC2CQ9Y4E1 1318 aa21.02■□□□□ 0.95
ARPC1A-201ENST00000262942 NPATQ14207 1427 aa21.01■□□□□ 0.95
ARPC1A-201ENST00000262942 ARHGAP31Q2M1Z3 1444 aa21■□□□□ 0.95
ARPC1A-201ENST00000262942 SYNMO15061 1565 aa21■□□□□ 0.95
ARPC1A-201ENST00000262942 SPATA31D1Q6ZQQ2 1576 aa20.99■□□□□ 0.95
ARPC1A-201ENST00000262942 PTPRMP28827 1452 aa20.99■□□□□ 0.95
ARPC1A-201ENST00000262942 ACIN1Q9UKV3 1341 aaKnown RBP20.99■□□□□ 0.95
ARPC1A-201ENST00000262942 KDM4FA0A1W2PPD8 638 aa20.98■□□□□ 0.95
ARPC1A-201ENST00000262942 RPRD2Q5VT52 1461 aaKnown RBP20.98■□□□□ 0.95
ARPC1A-201ENST00000262942 DHX57Q6P158 1386 aaKnown RBP20.97■□□□□ 0.95
ARPC1A-201ENST00000262942 MYO5BQ9ULV0 1848 aa20.97■□□□□ 0.95
ARPC1A-201ENST00000262942 ZMYM3Q14202 1370 aa20.97■□□□□ 0.95
ARPC1A-201ENST00000262942 PIK3C2BO00750 1634 aa20.96■□□□□ 0.95
ARPC1A-201ENST00000262942 MPHOSPH9Q99550 1183 aa20.96■□□□□ 0.95
ARPC1A-201ENST00000262942 ERVK-7P63135 1459 aa20.96■□□□□ 0.95
ARPC1A-201ENST00000262942 SLC4A1APQ9BWU0 796 aaKnown RBP20.95■□□□□ 0.94
ARPC1A-201ENST00000262942 CLTCL1P53675 1640 aa20.94■□□□□ 0.94
ARPC1A-201ENST00000262942 MYO3AQ8NEV4 1616 aa20.94■□□□□ 0.94
ARPC1A-201ENST00000262942 TRPM2O94759 1503 aa20.94■□□□□ 0.94
ARPC1A-201ENST00000262942 ESF1Q9H501 851 aaKnown RBP20.93■□□□□ 0.94
ARPC1A-201ENST00000262942 SETD1BQ9UPS6 1966 aaKnown RBP20.93■□□□□ 0.94
ARPC1A-201ENST00000262942 KIF1BO60333 1816 aa20.92■□□□□ 0.94
ARPC1A-201ENST00000262942 NOS1P29475 1434 aa20.92■□□□□ 0.94
ARPC1A-201ENST00000262942 PKD2Q13563 968 aa20.92■□□□□ 0.94
ARPC1A-201ENST00000262942 UGGT1Q9NYU2 1555 aa20.92■□□□□ 0.94
ARPC1A-201ENST00000262942 PLA2R1Q13018 1463 aa20.91■□□□□ 0.94
ARPC1A-201ENST00000262942 ZNF142P52746 1687 aaPredicted RBP20.91■□□□□ 0.94
ARPC1A-201ENST00000262942 FOXD1Q16676 465 aa20.9■□□□□ 0.94
ARPC1A-201ENST00000262942 PTPRTO14522 1441 aa20.9■□□□□ 0.94
ARPC1A-201ENST00000262942 CEBPAP49715 358 aaPredicted RBP20.89■□□□□ 0.94
ARPC1A-201ENST00000262942 FBXO31Q5XUX0 539 aaPredicted RBP20.87■□□□□ 0.93
ARPC1A-201ENST00000262942 UBR1Q8IWV7 1749 aa20.86■□□□□ 0.93
ARPC1A-201ENST00000262942 KDM5AP29375 1690 aaKnown RBP20.85■□□□□ 0.93
ARPC1A-201ENST00000262942 ANKRD30BQ9BXX2 1392 aa20.84■□□□□ 0.93
ARPC1A-201ENST00000262942 PLPPR3Q6T4P5 718 aa20.84■□□□□ 0.93
ARPC1A-201ENST00000262942 TMEM131LA2VDJ0 1609 aa20.82■□□□□ 0.92
ARPC1A-201ENST00000262942 TNRQ92752 1358 aa20.81■□□□□ 0.92
ARPC1A-201ENST00000262942 CEP170BQ9Y4F5 1589 aaPredicted RBP20.81■□□□□ 0.92
ARPC1A-201ENST00000262942 IFT172Q9UG01 1749 aa20.8■□□□□ 0.92
ARPC1A-201ENST00000262942 ADGRB3O60242 1522 aa20.79■□□□□ 0.92
ARPC1A-201ENST00000262942 NLRP1Q9C000 1473 aa20.77■□□□□ 0.92
ARPC1A-201ENST00000262942 PPLO60437 1756 aa20.76■□□□□ 0.91
ARPC1A-201ENST00000262942 NEURL4Q96JN8 1562 aa20.75■□□□□ 0.91
ARPC1A-201ENST00000262942 CCDC144AA2RUR9 1427 aa20.74■□□□□ 0.91
ARPC1A-201ENST00000262942 A2ML1A8K2U0 1454 aa20.74■□□□□ 0.91
ARPC1A-201ENST00000262942 POLR1AO95602 1720 aaPredicted RBP20.71■□□□□ 0.91
ARPC1A-201ENST00000262942 UHRF1BP1Q6BDS2 1440 aa20.7■□□□□ 0.9
ARPC1A-201ENST00000262942 IDI1Q13907 227 aa20.7■□□□□ 0.9
ARPC1A-201ENST00000262942 SPATA31E1Q6ZUB1 1445 aa20.69■□□□□ 0.9
ARPC1A-201ENST00000262942 LMTK3Q96Q04 1460 aa20.68■□□□□ 0.9
ARPC1A-201ENST00000262942 CCER1Q8TC90 406 aaPredicted RBP20.68■□□□□ 0.9
ARPC1A-201ENST00000262942 SIN3AQ96ST3 1273 aa20.68■□□□□ 0.9
ARPC1A-201ENST00000262942 SLC52A1Q9NWF4 448 aa20.68■□□□□ 0.9
ARPC1A-201ENST00000262942 NEXMIFQ5QGS0 1516 aa20.67■□□□□ 0.9
ARPC1A-201ENST00000262942 CLSPNQ9HAW4 1339 aa20.66■□□□□ 0.9
ARPC1A-201ENST00000262942 SLIT1O75093 1534 aa20.64■□□□□ 0.89
ARPC1A-201ENST00000262942 STRCQ7RTU9 1775 aa20.63■□□□□ 0.89
ARPC1A-201ENST00000262942 ARHGAP23Q9P227 1491 aa20.62■□□□□ 0.89
ARPC1A-201ENST00000262942 ZFYVE9O95405 1425 aa20.6■□□□□ 0.89
ARPC1A-201ENST00000262942 IQGAP1P46940 1657 aa20.59■□□□□ 0.89
ARPC1A-201ENST00000262942 CHGAP10645 457 aaKnown RBP20.58■□□□□ 0.88
ARPC1A-201ENST00000262942 NEUROD1Q13562 356 aa20.58■□□□□ 0.88
ARPC1A-201ENST00000262942 NRXN3Q9Y4C0 1643 aa20.57■□□□□ 0.88
ARPC1A-201ENST00000262942 SETD1AO15047 1707 aaKnown RBP20.57■□□□□ 0.88
ARPC1A-201ENST00000262942 TMEM2Q9UHN6 1383 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms