RNA–Protein interactions for RNA: ENST00000262643.7

CCNE1-201, Transcript of cyclin E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNE1, Length 2,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-201ENST00000262643 PREX1Q8TCU6 1659 aa32.58■■■□□ 2.81
CCNE1-201ENST00000262643 SETD1BQ9UPS6 1966 aaKnown RBP32.58■■■□□ 2.81
CCNE1-201ENST00000262643 ANKRD30AQ9BXX3 1397 aa32.57■■■□□ 2.8
CCNE1-201ENST00000262643 EIF2AK4Q9P2K8 1649 aaKnown RBP32.56■■■□□ 2.8
CCNE1-201ENST00000262643 WASHC2CQ9Y4E1 1318 aa32.56■■■□□ 2.8
CCNE1-201ENST00000262643 KDM5DQ9BY66 1539 aa32.54■■■□□ 2.8
CCNE1-201ENST00000262643 NCOA1Q15788 1441 aa32.53■■■□□ 2.8
CCNE1-201ENST00000262643 UHRF1BP1Q6BDS2 1440 aa32.53■■■□□ 2.8
CCNE1-201ENST00000262643 RNF17Q9BXT8 1623 aaKnown RBP32.53■■■□□ 2.8
CCNE1-201ENST00000262643 ERBINQ96RT1 1412 aa32.51■■■□□ 2.79
CCNE1-201ENST00000262643 NPATQ14207 1427 aa32.49■■■□□ 2.79
CCNE1-201ENST00000262643 ITGAEP38570 1179 aa32.48■■■□□ 2.79
CCNE1-201ENST00000262643 ADGRL2O95490 1459 aa32.48■■■□□ 2.79
CCNE1-201ENST00000262643 FAM135AQ9P2D6 1515 aa32.47■■■□□ 2.79
CCNE1-201ENST00000262643 PTPRKQ15262 1439 aa32.47■■■□□ 2.79
CCNE1-201ENST00000262643 MROH1Q8NDA8 1641 aa32.46■■■□□ 2.79
CCNE1-201ENST00000262643 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.42■■■□□ 2.783e-7■■■■■ 28.6
CCNE1-201ENST00000262643 ABCC3O15438 1527 aa32.42■■■□□ 2.78
CCNE1-201ENST00000262643 PCGF6Q9BYE7 350 aa32.41■■■□□ 2.78
CCNE1-201ENST00000262643 FBXO31Q5XUX0 539 aaPredicted RBP32.41■■■□□ 2.78
CCNE1-201ENST00000262643 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.4■■■□□ 2.78
CCNE1-201ENST00000262643 ZC3H13Q5T200 1668 aaKnown RBP32.39■■■□□ 2.78
CCNE1-201ENST00000262643 PZPP20742 1482 aa32.38■■■□□ 2.77
CCNE1-201ENST00000262643 CEP152O94986 1710 aa32.38■■■□□ 2.77
CCNE1-201ENST00000262643 RRBP1Q9P2E9 1410 aaKnown RBP32.37■■■□□ 2.77
CCNE1-201ENST00000262643 PRDM15P57071 1507 aaPredicted RBP32.37■■■□□ 2.77
CCNE1-201ENST00000262643 ANKRD50Q9ULJ7 1429 aa32.35■■■□□ 2.77
CCNE1-201ENST00000262643 MYO3AQ8NEV4 1616 aa32.35■■■□□ 2.77
CCNE1-201ENST00000262643 DEPDC5O75140 1603 aa32.34■■■□□ 2.77
CCNE1-201ENST00000262643 TRIM26Q12899 539 aaPredicted RBP32.33■■■□□ 2.77
CCNE1-201ENST00000262643 ROCK1Q13464 1354 aa32.32■■■□□ 2.76
CCNE1-201ENST00000262643 KANK1Q14678 1352 aa32.31■■■□□ 2.76
CCNE1-201ENST00000262643 TNRQ92752 1358 aa32.31■■■□□ 2.76
CCNE1-201ENST00000262643 CAMSAP1Q5T5Y3 1602 aa32.3■■■□□ 2.76
CCNE1-201ENST00000262643 CEP170BQ9Y4F5 1589 aaPredicted RBP32.27■■■□□ 2.76
CCNE1-201ENST00000262643 CFAP65Q6ZU64 1925 aaKnown RBP32.27■■■□□ 2.76
CCNE1-201ENST00000262643 ZNF142P52746 1687 aaPredicted RBP32.26■■■□□ 2.75
CCNE1-201ENST00000262643 STRCQ7RTU9 1775 aa32.24■■■□□ 2.75
CCNE1-201ENST00000262643 A2ML1A8K2U0 1454 aa32.21■■■□□ 2.75
CCNE1-201ENST00000262643 VWDEQ8N2E2 1590 aa32.21■■■□□ 2.75
CCNE1-201ENST00000262643 ERVK-7P63135 1459 aa32.2■■■□□ 2.75
CCNE1-201ENST00000262643 SPATA31D1Q6ZQQ2 1576 aa32.19■■■□□ 2.74
CCNE1-201ENST00000262643 ARHGAP31Q2M1Z3 1444 aa32.18■■■□□ 2.74
CCNE1-201ENST00000262643 LMTK2Q8IWU2 1503 aa32.17■■■□□ 2.74
CCNE1-201ENST00000262643 NLRP1Q9C000 1473 aa32.14■■■□□ 2.74
CCNE1-201ENST00000262643 DMRT2Q9Y5R5 561 aa32.14■■■□□ 2.74
CCNE1-201ENST00000262643 UNC13BO14795 1591 aa32.12■■■□□ 2.73
CCNE1-201ENST00000262643 NCKAP5LQ9HCH0 1330 aa32.11■■■□□ 2.73
CCNE1-201ENST00000262643 EFCAB6Q5THR3 1501 aa32.1■■■□□ 2.73
CCNE1-201ENST00000262643 PLA2R1Q13018 1463 aa32.08■■■□□ 2.73
CCNE1-201ENST00000262643 UGGT1Q9NYU2 1555 aa32.08■■■□□ 2.73
CCNE1-201ENST00000262643 THEMISQ8N1K5 641 aaPredicted RBP32.05■■■□□ 2.72
CCNE1-201ENST00000262643 NUP155O75694 1391 aa32.04■■■□□ 2.72
CCNE1-201ENST00000262643 PKD2Q13563 968 aa32.04■■■□□ 2.72
CCNE1-201ENST00000262643 TET3O43151 1660 aa32.03■■■□□ 2.72
CCNE1-201ENST00000262643 PTPRTO14522 1441 aa32.03■■■□□ 2.72
CCNE1-201ENST00000262643 NAIPQ13075 1403 aa32.03■■■□□ 2.72
CCNE1-201ENST00000262643 IQGAP3Q86VI3 1631 aa32■■■□□ 2.71
CCNE1-201ENST00000262643 GCC2Q8IWJ2 1684 aa32■■■□□ 2.71
CCNE1-201ENST00000262643 RPRD2Q5VT52 1461 aaKnown RBP31.98■■■□□ 2.71
CCNE1-201ENST00000262643 HFM1A2PYH4 1435 aa31.97■■■□□ 2.71
CCNE1-201ENST00000262643 SYNMO15061 1565 aa31.97■■■□□ 2.71
CCNE1-201ENST00000262643 NOS1P29475 1434 aa31.96■■■□□ 2.71
CCNE1-201ENST00000262643 UBR1Q8IWV7 1749 aa31.96■■■□□ 2.71
CCNE1-201ENST00000262643 IDI1Q13907 227 aa31.94■■■□□ 2.7
CCNE1-201ENST00000262643 ANKLE2Q86XL3 938 aa31.94■■■□□ 2.7
CCNE1-201ENST00000262643 POLR1AO95602 1720 aaPredicted RBP31.94■■■□□ 2.7
CCNE1-201ENST00000262643 PIK3C2BO00750 1634 aa31.93■■■□□ 2.7
CCNE1-201ENST00000262643 E9PCH4 1651 aa31.93■■■□□ 2.7
CCNE1-201ENST00000262643 STAG3Q9UJ98 1225 aa31.93■■■□□ 2.7
CCNE1-201ENST00000262643 NEURL4Q96JN8 1562 aa31.89■■■□□ 2.7
CCNE1-201ENST00000262643 SLC52A1Q9NWF4 448 aa31.87■■■□□ 2.69
CCNE1-201ENST00000262643 TRIM52Q96A61 297 aa31.86■■■□□ 2.69
CCNE1-201ENST00000262643 ILDR1Q86SU0 546 aaPredicted RBP31.85■■■□□ 2.69
CCNE1-201ENST00000262643 CERKQ8TCT0 537 aa31.83■■■□□ 2.69
CCNE1-201ENST00000262643 ZNF335Q9H4Z2 1342 aaPredicted RBP31.81■■■□□ 2.68
CCNE1-201ENST00000262643 NPHP4O75161 1426 aaPredicted RBP31.81■■■□□ 2.68
CCNE1-201ENST00000262643 TXNDC2Q86VQ3 553 aa31.8■■■□□ 2.68
CCNE1-201ENST00000262643 SLIT1O75093 1534 aa31.8■■■□□ 2.68
CCNE1-201ENST00000262643 ADGRB3O60242 1522 aa31.79■■■□□ 2.68
CCNE1-201ENST00000262643 KDM5AP29375 1690 aaKnown RBP31.79■■■□□ 2.68
CCNE1-201ENST00000262643 ARHGAP23Q9P227 1491 aa31.79■■■□□ 2.68
CCNE1-201ENST00000262643 MED14O60244 1454 aa31.78■■■□□ 2.68
CCNE1-201ENST00000262643 TMEM2Q9UHN6 1383 aa31.78■■■□□ 2.68
CCNE1-201ENST00000262643 LTKP29376 864 aa31.78■■■□□ 2.68
CCNE1-201ENST00000262643 SCAF11Q99590 1463 aaKnown RBP31.78■■■□□ 2.68
CCNE1-201ENST00000262643 EID1Q9Y6B2 187 aa31.76■■■□□ 2.68
CCNE1-201ENST00000262643 IQGAP1P46940 1657 aa31.76■■■□□ 2.67
CCNE1-201ENST00000262643 LTBP4Q8N2S1 1624 aa31.76■■■□□ 2.67
CCNE1-201ENST00000262643 CHGAP10645 457 aaKnown RBP31.75■■■□□ 2.67
CCNE1-201ENST00000262643 FBXO41Q8TF61 875 aa31.73■■■□□ 2.67
CCNE1-201ENST00000262643 MYO5BQ9ULV0 1848 aa31.72■■■□□ 2.67
CCNE1-201ENST00000262643 SLC4A1APQ9BWU0 796 aaKnown RBP31.71■■■□□ 2.67
CCNE1-201ENST00000262643 SPHKAPQ2M3C7 1700 aa31.71■■■□□ 2.67
CCNE1-201ENST00000262643 TMEM131LA2VDJ0 1609 aa31.7■■■□□ 2.66
CCNE1-201ENST00000262643 SETD5Q9C0A6 1442 aa31.67■■■□□ 2.66
CCNE1-201ENST00000262643 SENP3Q9H4L4 574 aaPredicted RBP31.62■■■□□ 2.65
CCNE1-201ENST00000262643 RIMS2Q9UQ26 1411 aa31.61■■■□□ 2.65
CCNE1-201ENST00000262643 ZFYVE9O95405 1425 aa31.59■■■□□ 2.65
CCNE1-201ENST00000262643 TRPM2O94759 1503 aa31.59■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms