RNA–Protein interactions for RNA: ENST00000262613.9

SLC9A3R1-201, Transcript of SLC9A3 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC9A3R1, Length 1,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R1-201ENST00000262613 MAGI2Q86UL8 1455 aa30.13■■■□□ 2.41
SLC9A3R1-201ENST00000262613 FRMPD1Q5SYB0 1578 aa30.12■■■□□ 2.41
SLC9A3R1-201ENST00000262613 RAPGEF3O95398 923 aa30.12■■■□□ 2.41
SLC9A3R1-201ENST00000262613 MYT1LQ9UL68 1186 aa30.12■■■□□ 2.41
SLC9A3R1-201ENST00000262613 FAM135AQ9P2D6 1515 aa30.1■■■□□ 2.41
SLC9A3R1-201ENST00000262613 DHX29Q7Z478 1369 aaKnown RBP30.09■■■□□ 2.41
SLC9A3R1-201ENST00000262613 EIF2AK4Q9P2K8 1649 aaKnown RBP30.09■■■□□ 2.41
SLC9A3R1-201ENST00000262613 FOXD1Q16676 465 aa30.08■■■□□ 2.41
SLC9A3R1-201ENST00000262613 IQGAP3Q86VI3 1631 aa30.08■■■□□ 2.41
SLC9A3R1-201ENST00000262613 ABCA6Q8N139 1617 aa30.08■■■□□ 2.41
SLC9A3R1-201ENST00000262613 ANKRD30BQ9BXX2 1392 aa30.07■■■□□ 2.4
SLC9A3R1-201ENST00000262613 DEPDC5O75140 1603 aa30.06■■■□□ 2.4
SLC9A3R1-201ENST00000262613 ZMYM4Q5VZL5 1548 aa30.04■■■□□ 2.4
SLC9A3R1-201ENST00000262613 A2MP01023 1474 aa30.04■■■□□ 2.4
SLC9A3R1-201ENST00000262613 PKD2Q13563 968 aa30.04■■■□□ 2.4
SLC9A3R1-201ENST00000262613 TIMELESSQ9UNS1 1208 aa30.03■■■□□ 2.4
SLC9A3R1-201ENST00000262613 DIP2CQ9Y2E4 1556 aa30.01■■■□□ 2.4
SLC9A3R1-201ENST00000262613 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.99■■■□□ 2.39
SLC9A3R1-201ENST00000262613 MROH1Q8NDA8 1641 aa29.96■■■□□ 2.39
SLC9A3R1-201ENST00000262613 BCORL1Q5H9F3 1711 aa29.95■■■□□ 2.39
SLC9A3R1-201ENST00000262613 PRDM15P57071 1507 aaPredicted RBP29.95■■■□□ 2.39
SLC9A3R1-201ENST00000262613 VWDEQ8N2E2 1590 aa29.95■■■□□ 2.38
SLC9A3R1-201ENST00000262613 KIF3BO15066 747 aa29.94■■■□□ 2.38
SLC9A3R1-201ENST00000262613 YEATS2Q9ULM3 1422 aa29.94■■■□□ 2.38
SLC9A3R1-201ENST00000262613 RNF17Q9BXT8 1623 aaKnown RBP29.94■■■□□ 2.38
SLC9A3R1-201ENST00000262613 RPRD2Q5VT52 1461 aaKnown RBP29.93■■■□□ 2.38
SLC9A3R1-201ENST00000262613 TONSLQ96HA7 1378 aa29.93■■■□□ 2.38
SLC9A3R1-201ENST00000262613 COL17A1Q9UMD9 1497 aaPredicted RBP29.92■■■□□ 2.38
SLC9A3R1-201ENST00000262613 MYT1Q01538 1121 aa29.9■■■□□ 2.38
SLC9A3R1-201ENST00000262613 KANK1Q14678 1352 aa29.86■■■□□ 2.37
SLC9A3R1-201ENST00000262613 TET3O43151 1660 aa29.86■■■□□ 2.37
SLC9A3R1-201ENST00000262613 E9PCH4 1651 aa29.83■■■□□ 2.37
SLC9A3R1-201ENST00000262613 PPP1R15AO75807 674 aaPredicted RBP29.83■■■□□ 2.37
SLC9A3R1-201ENST00000262613 ATP10AO60312 1499 aa29.8■■■□□ 2.36
SLC9A3R1-201ENST00000262613 PLA2R1Q13018 1463 aa29.8■■■□□ 2.36
SLC9A3R1-201ENST00000262613 REREQ9P2R6 1566 aa29.8■■■□□ 2.36
SLC9A3R1-201ENST00000262613 LMTK2Q8IWU2 1503 aa29.79■■■□□ 2.36
SLC9A3R1-201ENST00000262613 TRHP20396 242 aaPredicted RBP29.77■■■□□ 2.36
SLC9A3R1-201ENST00000262613 ARHGEF40Q8TER5 1519 aa29.77■■■□□ 2.36
SLC9A3R1-201ENST00000262613 CEP152O94986 1710 aa29.77■■■□□ 2.36
SLC9A3R1-201ENST00000262613 EFCAB6Q5THR3 1501 aa29.74■■■□□ 2.35
SLC9A3R1-201ENST00000262613 L3MBTL2Q969R5 705 aa29.73■■■□□ 2.35
SLC9A3R1-201ENST00000262613 GGT6Q6P531 493 aa29.72■■■□□ 2.35
SLC9A3R1-201ENST00000262613 CCDC144AA2RUR9 1427 aa29.71■■■□□ 2.35
SLC9A3R1-201ENST00000262613 SPHKAPQ2M3C7 1700 aa29.7■■■□□ 2.35
SLC9A3R1-201ENST00000262613 AGLP35573 1532 aa29.7■■■□□ 2.35
SLC9A3R1-201ENST00000262613 ABCC3O15438 1527 aa29.7■■■□□ 2.34
SLC9A3R1-201ENST00000262613 PTPRTO14522 1441 aa29.69■■■□□ 2.34
SLC9A3R1-201ENST00000262613 TRPM2O94759 1503 aa29.68■■■□□ 2.34
SLC9A3R1-201ENST00000262613 SIGLEC1Q9BZZ2 1709 aa29.67■■■□□ 2.34
SLC9A3R1-201ENST00000262613 ZC3H13Q5T200 1668 aaKnown RBP29.65■■■□□ 2.34
SLC9A3R1-201ENST00000262613 CAMSAP1Q5T5Y3 1602 aa29.63■■■□□ 2.33
SLC9A3R1-201ENST00000262613 WASHC2CQ9Y4E1 1318 aa29.61■■■□□ 2.33
SLC9A3R1-201ENST00000262613 NPATQ14207 1427 aa29.59■■■□□ 2.33
SLC9A3R1-201ENST00000262613 CLTCL1P53675 1640 aa29.58■■■□□ 2.33
SLC9A3R1-201ENST00000262613 ARHGAP31Q2M1Z3 1444 aa29.53■■■□□ 2.32
SLC9A3R1-201ENST00000262613 NBPF8Q3BBV2 869 aa29.52■■■□□ 2.32
SLC9A3R1-201ENST00000262613 SPATA31E1Q6ZUB1 1445 aa29.51■■■□□ 2.31
SLC9A3R1-201ENST00000262613 SUPT16HQ9Y5B9 1047 aaKnown RBP29.5■■■□□ 2.31
SLC9A3R1-201ENST00000262613 UHRF1BP1Q6BDS2 1440 aa29.5■■■□□ 2.31
SLC9A3R1-201ENST00000262613 PPP6R1Q9UPN7 881 aa29.49■■■□□ 2.31
SLC9A3R1-201ENST00000262613 UGGT1Q9NYU2 1555 aa29.48■■■□□ 2.31
SLC9A3R1-201ENST00000262613 CNTLNQ9NXG0 1405 aa29.48■■■□□ 2.31
SLC9A3R1-201ENST00000262613 CFAP65Q6ZU64 1925 aaKnown RBP29.47■■■□□ 2.31
SLC9A3R1-201ENST00000262613 NEURL4Q96JN8 1562 aa29.46■■■□□ 2.31
SLC9A3R1-201ENST00000262613 NOS1P29475 1434 aa29.46■■■□□ 2.31
SLC9A3R1-201ENST00000262613 RGL3Q3MIN7 710 aa29.44■■■□□ 2.3
SLC9A3R1-201ENST00000262613 DCAF11Q8TEB1 546 aa29.44■■■□□ 2.3
SLC9A3R1-201ENST00000262613 CLTCQ00610 1675 aaKnown RBP29.44■■■□□ 2.3
SLC9A3R1-201ENST00000262613 KIF1BO60333 1816 aa29.42■■■□□ 2.3
SLC9A3R1-201ENST00000262613 SYNMO15061 1565 aa29.41■■■□□ 2.3
SLC9A3R1-201ENST00000262613 PREX1Q8TCU6 1659 aa29.4■■■□□ 2.3
SLC9A3R1-201ENST00000262613 MLECQ14165 292 aa29.39■■■□□ 2.29
SLC9A3R1-201ENST00000262613 KDM2AQ9Y2K7 1162 aa29.39■■■□□ 2.29
SLC9A3R1-201ENST00000262613 PIK3C2BO00750 1634 aa29.38■■■□□ 2.29
SLC9A3R1-201ENST00000262613 RALGAPBQ86X10 1494 aa29.37■■■□□ 2.29
SLC9A3R1-201ENST00000262613 ZNF326Q5BKZ1 582 aaKnown RBP29.37■■■□□ 2.29
SLC9A3R1-201ENST00000262613 PRAG1Q86YV5 1406 aa29.37■■■□□ 2.29
SLC9A3R1-201ENST00000262613 MROH2AA6NES4 1674 aa29.36■■■□□ 2.29
SLC9A3R1-201ENST00000262613 ADGRB3O60242 1522 aa29.35■■■□□ 2.29
SLC9A3R1-201ENST00000262613 ARID4BQ4LE39 1312 aaPredicted RBP29.34■■■□□ 2.29
SLC9A3R1-201ENST00000262613 ERVK-7P63135 1459 aa29.31■■■□□ 2.28
SLC9A3R1-201ENST00000262613 TRPM1Q7Z4N2 1603 aa29.31■■■□□ 2.28
SLC9A3R1-201ENST00000262613 IFT172Q9UG01 1749 aa29.29■■■□□ 2.28
SLC9A3R1-201ENST00000262613 MADDQ8WXG6 1647 aa29.27■■■□□ 2.28
SLC9A3R1-201ENST00000262613 HIRIP3Q9BW71 556 aaPredicted RBP29.27■■■□□ 2.28
SLC9A3R1-201ENST00000262613 SPATA31D1Q6ZQQ2 1576 aa29.27■■■□□ 2.28
SLC9A3R1-201ENST00000262613 EIF4G2P78344 907 aaKnown RBP eCLIP29.26■■■□□ 2.28
SLC9A3R1-201ENST00000262613 HSPA5P11021 654 aaKnown RBP29.26■■■□□ 2.27
SLC9A3R1-201ENST00000262613 STAC3Q96MF2 364 aa29.26■■■□□ 2.27
SLC9A3R1-201ENST00000262613 FBXO31Q5XUX0 539 aaPredicted RBP29.25■■■□□ 2.27
SLC9A3R1-201ENST00000262613 SLC52A1Q9NWF4 448 aa29.24■■■□□ 2.27
SLC9A3R1-201ENST00000262613 ESF1Q9H501 851 aaKnown RBP29.23■■■□□ 2.27
SLC9A3R1-201ENST00000262613 MYOM2P54296 1465 aa29.23■■■□□ 2.27
SLC9A3R1-201ENST00000262613 ZMYM3Q14202 1370 aa29.22■■■□□ 2.27
SLC9A3R1-201ENST00000262613 IDI1Q13907 227 aa29.21■■■□□ 2.27
SLC9A3R1-201ENST00000262613 PPLO60437 1756 aa29.2■■■□□ 2.26
SLC9A3R1-201ENST00000262613 CHGAP10645 457 aaKnown RBP29.19■■■□□ 2.26
SLC9A3R1-201ENST00000262613 ROCK2O75116 1388 aaKnown RBP29.18■■■□□ 2.26
SLC9A3R1-201ENST00000262613 GPRASP1Q5JY77 1395 aa29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms