RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 DIP2CQ9Y2E4 1556 aa27.3■■□□□ 1.96
COL4A3BP-201ENST00000261415 KDM5DQ9BY66 1539 aa27.28■■□□□ 1.96
COL4A3BP-201ENST00000261415 COL17A1Q9UMD9 1497 aaPredicted RBP27.28■■□□□ 1.96
COL4A3BP-201ENST00000261415 CLSPNQ9HAW4 1339 aa27.28■■□□□ 1.96
COL4A3BP-201ENST00000261415 DEPDC5O75140 1603 aa27.26■■□□□ 1.95
COL4A3BP-201ENST00000261415 PZPP20742 1482 aa27.26■■□□□ 1.95
COL4A3BP-201ENST00000261415 A2MP01023 1474 aa27.25■■□□□ 1.95
COL4A3BP-201ENST00000261415 DHX29Q7Z478 1369 aaKnown RBP27.24■■□□□ 1.95
COL4A3BP-201ENST00000261415 MAGI2Q86UL8 1455 aa27.24■■□□□ 1.95
COL4A3BP-201ENST00000261415 BCORL1Q5H9F3 1711 aa27.22■■□□□ 1.95
COL4A3BP-201ENST00000261415 YEATS2Q9ULM3 1422 aa27.22■■□□□ 1.95
COL4A3BP-201ENST00000261415 IQGAP3Q86VI3 1631 aa27.22■■□□□ 1.95
COL4A3BP-201ENST00000261415 MPHOSPH9Q99550 1183 aa27.21■■□□□ 1.95
COL4A3BP-201ENST00000261415 NUP155O75694 1391 aa27.2■■□□□ 1.94
COL4A3BP-201ENST00000261415 FAM135AQ9P2D6 1515 aa27.18■■□□□ 1.94
COL4A3BP-201ENST00000261415 RNF17Q9BXT8 1623 aaKnown RBP27.18■■□□□ 1.94
COL4A3BP-201ENST00000261415 MROH1Q8NDA8 1641 aa27.16■■□□□ 1.94
COL4A3BP-201ENST00000261415 SLC4A1APQ9BWU0 796 aaKnown RBP27.16■■□□□ 1.94
COL4A3BP-201ENST00000261415 ARHGEF40Q8TER5 1519 aa27.16■■□□□ 1.94
COL4A3BP-201ENST00000261415 PRKCSHP14314 528 aaPredicted RBP27.15■■□□□ 1.94
COL4A3BP-201ENST00000261415 PRDM15P57071 1507 aaPredicted RBP27.14■■□□□ 1.94
COL4A3BP-201ENST00000261415 REREQ9P2R6 1566 aa27.13■■□□□ 1.93
COL4A3BP-201ENST00000261415 KIF3BO15066 747 aa27.12■■□□□ 1.93
COL4A3BP-201ENST00000261415 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.11■■□□□ 1.932e-6■■■■□ 20.7
COL4A3BP-201ENST00000261415 ATP10AO60312 1499 aa27.1■■□□□ 1.93
COL4A3BP-201ENST00000261415 VWDEQ8N2E2 1590 aa27.1■■□□□ 1.93
COL4A3BP-201ENST00000261415 SIGLEC1Q9BZZ2 1709 aa27.08■■□□□ 1.93
COL4A3BP-201ENST00000261415 CEP152O94986 1710 aa27.07■■□□□ 1.92
COL4A3BP-201ENST00000261415 FOXD1Q16676 465 aa27.06■■□□□ 1.92
COL4A3BP-201ENST00000261415 TET3O43151 1660 aa27.06■■□□□ 1.92
COL4A3BP-201ENST00000261415 PKD2Q13563 968 aa27.05■■□□□ 1.92
COL4A3BP-201ENST00000261415 E9PCH4 1651 aa27.03■■□□□ 1.92
COL4A3BP-201ENST00000261415 ZNF316A6NFI3 1004 aaPredicted RBP27.02■■□□□ 1.92
COL4A3BP-201ENST00000261415 YTHDC1Q96MU7 727 aaKnown RBP27.02■■□□□ 1.92
COL4A3BP-201ENST00000261415 SIN3AQ96ST3 1273 aa27.02■■□□□ 1.92
COL4A3BP-201ENST00000261415 KANK1Q14678 1352 aa27.02■■□□□ 1.92
COL4A3BP-201ENST00000261415 ANKRD30BQ9BXX2 1392 aa27.01■■□□□ 1.91
COL4A3BP-201ENST00000261415 AGLP35573 1532 aa27.01■■□□□ 1.91
COL4A3BP-201ENST00000261415 ERICH6Q7L0X2 663 aa26.99■■□□□ 1.91
COL4A3BP-201ENST00000261415 ZC3H13Q5T200 1668 aaKnown RBP26.98■■□□□ 1.91
COL4A3BP-201ENST00000261415 LMTK2Q8IWU2 1503 aa26.97■■□□□ 1.91
COL4A3BP-201ENST00000261415 GGT6Q6P531 493 aa26.95■■□□□ 1.91
COL4A3BP-201ENST00000261415 EFCAB6Q5THR3 1501 aa26.95■■□□□ 1.9
COL4A3BP-201ENST00000261415 SPHKAPQ2M3C7 1700 aa26.94■■□□□ 1.9
COL4A3BP-201ENST00000261415 CAMSAP1Q5T5Y3 1602 aa26.93■■□□□ 1.9
COL4A3BP-201ENST00000261415 ABCC3O15438 1527 aa26.93■■□□□ 1.9
COL4A3BP-201ENST00000261415 CFAP65Q6ZU64 1925 aaKnown RBP26.9■■□□□ 1.9
COL4A3BP-201ENST00000261415 RPRD2Q5VT52 1461 aaKnown RBP26.9■■□□□ 1.9
COL4A3BP-201ENST00000261415 TSHZ2Q9NRE2 1034 aa26.87■■□□□ 1.89
COL4A3BP-201ENST00000261415 PLA2R1Q13018 1463 aa26.86■■□□□ 1.89
COL4A3BP-201ENST00000261415 WASHC2CQ9Y4E1 1318 aa26.85■■□□□ 1.89
COL4A3BP-201ENST00000261415 CLTCQ00610 1675 aaKnown RBP26.84■■□□□ 1.89
COL4A3BP-201ENST00000261415 TIMELESSQ9UNS1 1208 aa26.84■■□□□ 1.89
COL4A3BP-201ENST00000261415 TONSLQ96HA7 1378 aa26.84■■□□□ 1.89
COL4A3BP-201ENST00000261415 TRPM2O94759 1503 aa26.83■■□□□ 1.89
COL4A3BP-201ENST00000261415 SUPT16HQ9Y5B9 1047 aaKnown RBP26.79■■□□□ 1.88
COL4A3BP-201ENST00000261415 CCDC144AA2RUR9 1427 aa26.79■■□□□ 1.88
COL4A3BP-201ENST00000261415 PTPRTO14522 1441 aa26.79■■□□□ 1.88
COL4A3BP-201ENST00000261415 NPATQ14207 1427 aa26.79■■□□□ 1.88
COL4A3BP-201ENST00000261415 MIER1Q8N108 512 aa26.77■■□□□ 1.88
COL4A3BP-201ENST00000261415 CLTCL1P53675 1640 aa26.77■■□□□ 1.88
COL4A3BP-201ENST00000261415 PPP6R1Q9UPN7 881 aa26.76■■□□□ 1.87
COL4A3BP-201ENST00000261415 ARID4BQ4LE39 1312 aaPredicted RBP26.75■■□□□ 1.87
COL4A3BP-201ENST00000261415 ARHGAP31Q2M1Z3 1444 aa26.75■■□□□ 1.87
COL4A3BP-201ENST00000261415 MLECQ14165 292 aa26.74■■□□□ 1.87
COL4A3BP-201ENST00000261415 PREX1Q8TCU6 1659 aa26.74■■□□□ 1.87
COL4A3BP-201ENST00000261415 KIF1BO60333 1816 aa26.72■■□□□ 1.87
COL4A3BP-201ENST00000261415 FER1L4A9Z1Z3 1794 aa26.69■■□□□ 1.86
COL4A3BP-201ENST00000261415 UGGT1Q9NYU2 1555 aa26.69■■□□□ 1.86
COL4A3BP-201ENST00000261415 MROH2AA6NES4 1674 aa26.68■■□□□ 1.86
COL4A3BP-201ENST00000261415 L3MBTL2Q969R5 705 aa26.68■■□□□ 1.86
COL4A3BP-201ENST00000261415 SYNMO15061 1565 aa26.67■■□□□ 1.86
COL4A3BP-201ENST00000261415 CNTLNQ9NXG0 1405 aa26.67■■□□□ 1.86
COL4A3BP-201ENST00000261415 PPP1R15AO75807 674 aaPredicted RBP26.67■■□□□ 1.86
COL4A3BP-201ENST00000261415 NOS1P29475 1434 aa26.66■■□□□ 1.86
COL4A3BP-201ENST00000261415 PIK3C2BO00750 1634 aa26.66■■□□□ 1.86
COL4A3BP-201ENST00000261415 ESF1Q9H501 851 aaKnown RBP26.61■■□□□ 1.85
COL4A3BP-201ENST00000261415 NEURL4Q96JN8 1562 aa26.61■■□□□ 1.85
COL4A3BP-201ENST00000261415 SPATA31E1Q6ZUB1 1445 aa26.61■■□□□ 1.85
COL4A3BP-201ENST00000261415 ERVK-7P63135 1459 aa26.6■■□□□ 1.85
COL4A3BP-201ENST00000261415 SPATA31D1Q6ZQQ2 1576 aa26.59■■□□□ 1.85
COL4A3BP-201ENST00000261415 C3P01024 1663 aa26.56■■□□□ 1.84
COL4A3BP-201ENST00000261415 MYO5BQ9ULV0 1848 aa26.56■■□□□ 1.84
COL4A3BP-201ENST00000261415 ZMYM3Q14202 1370 aa26.56■■□□□ 1.84
COL4A3BP-201ENST00000261415 ADGRB3O60242 1522 aa26.55■■□□□ 1.84
COL4A3BP-201ENST00000261415 IFT172Q9UG01 1749 aa26.55■■□□□ 1.84
COL4A3BP-201ENST00000261415 MADDQ8WXG6 1647 aa26.54■■□□□ 1.84
COL4A3BP-201ENST00000261415 RGL3Q3MIN7 710 aa26.54■■□□□ 1.84
COL4A3BP-201ENST00000261415 FBXO31Q5XUX0 539 aaPredicted RBP26.53■■□□□ 1.84
COL4A3BP-201ENST00000261415 ADAMTSL3P82987 1691 aa26.52■■□□□ 1.84
COL4A3BP-201ENST00000261415 RIMS1Q86UR5 1692 aaKnown RBP26.51■■□□□ 1.83
COL4A3BP-201ENST00000261415 DCAF11Q8TEB1 546 aa26.5■■□□□ 1.83
COL4A3BP-201ENST00000261415 PPLO60437 1756 aa26.49■■□□□ 1.83
COL4A3BP-201ENST00000261415 UHRF1BP1Q6BDS2 1440 aa26.48■■□□□ 1.83
COL4A3BP-201ENST00000261415 TMEM131LA2VDJ0 1609 aa26.47■■□□□ 1.83
COL4A3BP-201ENST00000261415 NBPF8Q3BBV2 869 aa26.47■■□□□ 1.83
COL4A3BP-201ENST00000261415 SLC52A1Q9NWF4 448 aa26.46■■□□□ 1.83
COL4A3BP-201ENST00000261415 KDM2AQ9Y2K7 1162 aa26.45■■□□□ 1.83
COL4A3BP-201ENST00000261415 IDI1Q13907 227 aa26.44■■□□□ 1.82
COL4A3BP-201ENST00000261415 TRPM1Q7Z4N2 1603 aa26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms