RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 RNF17Q9BXT8 1623 aaKnown RBP23.51■■□□□ 1.35
CCDC90B-201ENST00000260054 MROH1Q8NDA8 1641 aa23.51■■□□□ 1.35
CCDC90B-201ENST00000260054 ARID4BQ4LE39 1312 aaPredicted RBP23.51■■□□□ 1.35
CCDC90B-201ENST00000260054 GGT6Q6P531 493 aa23.5■■□□□ 1.35
CCDC90B-201ENST00000260054 TRIM52Q96A61 297 aa23.49■■□□□ 1.35
CCDC90B-201ENST00000260054 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.49■■□□□ 1.35
CCDC90B-201ENST00000260054 PRDM15P57071 1507 aaPredicted RBP23.48■■□□□ 1.35
CCDC90B-201ENST00000260054 NUP155O75694 1391 aa23.47■■□□□ 1.35
CCDC90B-201ENST00000260054 MLECQ14165 292 aa23.46■■□□□ 1.35
CCDC90B-201ENST00000260054 KDM5DQ9BY66 1539 aa23.45■■□□□ 1.34
CCDC90B-201ENST00000260054 ACIN1Q9UKV3 1341 aaKnown RBP23.45■■□□□ 1.34
CCDC90B-201ENST00000260054 VWDEQ8N2E2 1590 aa23.43■■□□□ 1.34
CCDC90B-201ENST00000260054 PZPP20742 1482 aa23.42■■□□□ 1.34
CCDC90B-201ENST00000260054 FAM135AQ9P2D6 1515 aa23.41■■□□□ 1.34
CCDC90B-201ENST00000260054 KANK1Q14678 1352 aa23.41■■□□□ 1.34
CCDC90B-201ENST00000260054 IQGAP3Q86VI3 1631 aa23.41■■□□□ 1.34
CCDC90B-201ENST00000260054 MPHOSPH9Q99550 1183 aa23.38■■□□□ 1.33
CCDC90B-201ENST00000260054 ABCC3O15438 1527 aa23.38■■□□□ 1.33
CCDC90B-201ENST00000260054 WASHC2CQ9Y4E1 1318 aa23.37■■□□□ 1.33
CCDC90B-201ENST00000260054 SLC4A1APQ9BWU0 796 aaKnown RBP23.37■■□□□ 1.33
CCDC90B-201ENST00000260054 PPP6R1Q9UPN7 881 aa23.37■■□□□ 1.33
CCDC90B-201ENST00000260054 DHX57Q6P158 1386 aaKnown RBP23.36■■□□□ 1.33
CCDC90B-201ENST00000260054 LMTK2Q8IWU2 1503 aa23.36■■□□□ 1.33
CCDC90B-201ENST00000260054 CEP152O94986 1710 aa23.36■■□□□ 1.33
CCDC90B-201ENST00000260054 ZC3H13Q5T200 1668 aaKnown RBP23.34■■□□□ 1.33
CCDC90B-201ENST00000260054 TET3O43151 1660 aa23.32■■□□□ 1.32
CCDC90B-201ENST00000260054 CLTCQ00610 1675 aaKnown RBP23.31■■□□□ 1.32
CCDC90B-201ENST00000260054 PKD2Q13563 968 aa23.31■■□□□ 1.32
CCDC90B-201ENST00000260054 EFCAB6Q5THR3 1501 aa23.3■■□□□ 1.32
CCDC90B-201ENST00000260054 ADAMTSL3P82987 1691 aa23.29■■□□□ 1.32
CCDC90B-201ENST00000260054 CAMSAP1Q5T5Y3 1602 aa23.29■■□□□ 1.32
CCDC90B-201ENST00000260054 ESF1Q9H501 851 aaKnown RBP23.29■■□□□ 1.32
CCDC90B-201ENST00000260054 FOXD1Q16676 465 aa23.28■■□□□ 1.32
CCDC90B-201ENST00000260054 FER1L4A9Z1Z3 1794 aa23.28■■□□□ 1.32
CCDC90B-201ENST00000260054 CNTLNQ9NXG0 1405 aa23.27■■□□□ 1.32
CCDC90B-201ENST00000260054 E9PCH4 1651 aa23.27■■□□□ 1.32
CCDC90B-201ENST00000260054 MADDQ8WXG6 1647 aa23.27■■□□□ 1.32
CCDC90B-201ENST00000260054 NPATQ14207 1427 aa23.27■■□□□ 1.31
CCDC90B-201ENST00000260054 ARHGAP31Q2M1Z3 1444 aa23.25■■□□□ 1.31
CCDC90B-201ENST00000260054 ZMYM3Q14202 1370 aa23.24■■□□□ 1.31
CCDC90B-201ENST00000260054 MROH2AA6NES4 1674 aa23.22■■□□□ 1.31
CCDC90B-201ENST00000260054 CCER1Q8TC90 406 aaPredicted RBP23.22■■□□□ 1.31
CCDC90B-201ENST00000260054 RPRD2Q5VT52 1461 aaKnown RBP23.21■■□□□ 1.31
CCDC90B-201ENST00000260054 RIMS1Q86UR5 1692 aaKnown RBP23.21■■□□□ 1.31
CCDC90B-201ENST00000260054 PLA2R1Q13018 1463 aa23.17■■□□□ 1.3
CCDC90B-201ENST00000260054 ANKRD30BQ9BXX2 1392 aa23.17■■□□□ 1.3
CCDC90B-201ENST00000260054 FBXO31Q5XUX0 539 aaPredicted RBP23.17■■□□□ 1.3
CCDC90B-201ENST00000260054 PTPRTO14522 1441 aa23.16■■□□□ 1.3
CCDC90B-201ENST00000260054 CEBPAP49715 358 aaPredicted RBP23.16■■□□□ 1.3
CCDC90B-201ENST00000260054 C3P01024 1663 aa23.16■■□□□ 1.3
CCDC90B-201ENST00000260054 CFAP65Q6ZU64 1925 aaKnown RBP23.16■■□□□ 1.3
CCDC90B-201ENST00000260054 KDM4FA0A1W2PPD8 638 aa23.15■■□□□ 1.3
CCDC90B-201ENST00000260054 NOS1P29475 1434 aa23.14■■□□□ 1.3
CCDC90B-201ENST00000260054 ERVK-7P63135 1459 aa23.14■■□□□ 1.3
CCDC90B-201ENST00000260054 PREX1Q8TCU6 1659 aa23.14■■□□□ 1.29
CCDC90B-201ENST00000260054 SPHKAPQ2M3C7 1700 aa23.14■■□□□ 1.29
CCDC90B-201ENST00000260054 PTPRMP28827 1452 aa23.11■■□□□ 1.29
CCDC90B-201ENST00000260054 TRPM2O94759 1503 aa23.11■■□□□ 1.29
CCDC90B-201ENST00000260054 SPATA31D1Q6ZQQ2 1576 aa23.11■■□□□ 1.29
CCDC90B-201ENST00000260054 PLPPR3Q6T4P5 718 aa23.11■■□□□ 1.29
CCDC90B-201ENST00000260054 CLSPNQ9HAW4 1339 aa23.11■■□□□ 1.29
CCDC90B-201ENST00000260054 SYNMO15061 1565 aa23.1■■□□□ 1.29
CCDC90B-201ENST00000260054 SIN3AQ96ST3 1273 aa23.08■■□□□ 1.29
CCDC90B-201ENST00000260054 UGGT1Q9NYU2 1555 aa23.08■■□□□ 1.28
CCDC90B-201ENST00000260054 CCDC144AA2RUR9 1427 aa23.07■■□□□ 1.28
CCDC90B-201ENST00000260054 CLTCL1P53675 1640 aa23.05■■□□□ 1.28
CCDC90B-201ENST00000260054 TNRQ92752 1358 aa23.05■■□□□ 1.28
CCDC90B-201ENST00000260054 PIK3C2BO00750 1634 aa23.03■■□□□ 1.28
CCDC90B-201ENST00000260054 NEUROD1Q13562 356 aa23.02■■□□□ 1.28
CCDC90B-201ENST00000260054 IDI1Q13907 227 aa23.01■■□□□ 1.27
CCDC90B-201ENST00000260054 SLC52A1Q9NWF4 448 aa23.01■■□□□ 1.27
CCDC90B-201ENST00000260054 NLRP1Q9C000 1473 aa22.95■■□□□ 1.26
CCDC90B-201ENST00000260054 MYO3AQ8NEV4 1616 aa22.95■■□□□ 1.26
CCDC90B-201ENST00000260054 SPATA31E1Q6ZUB1 1445 aa22.94■■□□□ 1.26
CCDC90B-201ENST00000260054 ADGRB3O60242 1522 aa22.92■■□□□ 1.26
CCDC90B-201ENST00000260054 KIF1BO60333 1816 aa22.92■■□□□ 1.26
CCDC90B-201ENST00000260054 CHGAP10645 457 aaKnown RBP22.92■■□□□ 1.26
CCDC90B-201ENST00000260054 SETD1BQ9UPS6 1966 aaKnown RBP22.92■■□□□ 1.26
CCDC90B-201ENST00000260054 TMEM131LA2VDJ0 1609 aa22.91■■□□□ 1.26
CCDC90B-201ENST00000260054 RGL3Q3MIN7 710 aa22.9■■□□□ 1.26
CCDC90B-201ENST00000260054 NEURL4Q96JN8 1562 aa22.89■■□□□ 1.25
CCDC90B-201ENST00000260054 A2ML1A8K2U0 1454 aa22.88■■□□□ 1.25
CCDC90B-201ENST00000260054 STAG3Q9UJ98 1225 aa22.88■■□□□ 1.25
CCDC90B-201ENST00000260054 TONSLQ96HA7 1378 aa22.88■■□□□ 1.25
CCDC90B-201ENST00000260054 CEP170BQ9Y4F5 1589 aaPredicted RBP22.87■■□□□ 1.25
CCDC90B-201ENST00000260054 UHRF1BP1Q6BDS2 1440 aa22.86■■□□□ 1.25
CCDC90B-201ENST00000260054 MYO5BQ9ULV0 1848 aa22.86■■□□□ 1.25
CCDC90B-201ENST00000260054 UBR1Q8IWV7 1749 aa22.86■■□□□ 1.25
CCDC90B-201ENST00000260054 ZNF142P52746 1687 aaPredicted RBP22.85■■□□□ 1.25
CCDC90B-201ENST00000260054 L3MBTL2Q969R5 705 aa22.85■■□□□ 1.25
CCDC90B-201ENST00000260054 KDM5AP29375 1690 aaKnown RBP22.85■■□□□ 1.25
CCDC90B-201ENST00000260054 ZNF326Q5BKZ1 582 aaKnown RBP22.84■■□□□ 1.25
CCDC90B-201ENST00000260054 TIMELESSQ9UNS1 1208 aa22.83■■□□□ 1.24
CCDC90B-201ENST00000260054 DCAF11Q8TEB1 546 aa22.8■■□□□ 1.24
CCDC90B-201ENST00000260054 NEXMIFQ5QGS0 1516 aa22.78■■□□□ 1.24
CCDC90B-201ENST00000260054 RPGRIP1LQ68CZ1 1315 aa22.78■■□□□ 1.24
CCDC90B-201ENST00000260054 TMEM2Q9UHN6 1383 aa22.78■■□□□ 1.24
CCDC90B-201ENST00000260054 THEMISQ8N1K5 641 aaPredicted RBP22.77■■□□□ 1.24
CCDC90B-201ENST00000260054 IFT172Q9UG01 1749 aa22.77■■□□□ 1.24
CCDC90B-201ENST00000260054 ZFYVE9O95405 1425 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms