RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 KIF13AQ9H1H9 1805 aa26.98■■□□□ 1.91
RARA-201ENST00000254066 UHRF1BP1LA0JNW5 1464 aa26.98■■□□□ 1.91
RARA-201ENST00000254066 FRAT1Q92837 279 aaPredicted RBP26.96■■□□□ 1.91
RARA-201ENST00000254066 ROCK1Q13464 1354 aa26.96■■□□□ 1.91
RARA-201ENST00000254066 KIAA0556O60303 1618 aa26.95■■□□□ 1.91
RARA-201ENST00000254066 BCORL1Q5H9F3 1711 aa26.95■■□□□ 1.9
RARA-201ENST00000254066 ABCC2Q92887 1545 aa26.94■■□□□ 1.9
RARA-201ENST00000254066 MBD5Q9P267 1494 aa26.94■■□□□ 1.9
RARA-201ENST00000254066 KIF15Q9NS87 1388 aa26.94■■□□□ 1.9
RARA-201ENST00000254066 CHIC2Q9UKJ5 165 aa26.91■■□□□ 1.9
RARA-201ENST00000254066 DIP2BQ9P265 1576 aa26.9■■□□□ 1.9
RARA-201ENST00000254066 USP47Q96K76 1375 aa26.9■■□□□ 1.9
RARA-201ENST00000254066 RALBP1Q15311 655 aa26.89■■□□□ 1.9
RARA-201ENST00000254066 KDM5CP41229 1560 aa26.89■■□□□ 1.9
RARA-201ENST00000254066 FAM69CQ0P6D2 419 aa26.89■■□□□ 1.89
RARA-201ENST00000254066 MYBBP1AQ9BQG0 1328 aaKnown RBP26.89■■□□□ 1.89
RARA-201ENST00000254066 KIF14Q15058 1648 aa26.88■■□□□ 1.89
RARA-201ENST00000254066 MAGI3Q5TCQ9 1506 aa26.88■■□□□ 1.89
RARA-201ENST00000254066 INSRP06213 1382 aa26.86■■□□□ 1.89
RARA-201ENST00000254066 PLB1Q6P1J6 1458 aa26.84■■□□□ 1.89
RARA-201ENST00000254066 FOXD1Q16676 465 aa26.83■■□□□ 1.89
RARA-201ENST00000254066 ZMYM4Q5VZL5 1548 aa26.83■■□□□ 1.89
RARA-201ENST00000254066 ASXL2Q76L83 1435 aa26.78■■□□□ 1.88
RARA-201ENST00000254066 UHRF1BP1Q6BDS2 1440 aa26.75■■□□□ 1.87
RARA-201ENST00000254066 E9PCH4 1651 aa26.75■■□□□ 1.87
RARA-201ENST00000254066 GLI2P10070 1586 aa26.75■■□□□ 1.87
RARA-201ENST00000254066 SLC4A1APQ9BWU0 796 aaKnown RBP26.75■■□□□ 1.87
RARA-201ENST00000254066 DAPK1P53355 1430 aa26.74■■□□□ 1.87
RARA-201ENST00000254066 DNMT1P26358 1616 aaKnown RBP26.74■■□□□ 1.87
RARA-201ENST00000254066 GLIPR1L2Q4G1C9 344 aa26.74■■□□□ 1.87
RARA-201ENST00000254066 RALGAPBQ86X10 1494 aa26.73■■□□□ 1.87
RARA-201ENST00000254066 FAM161AQ3B820 660 aa26.73■■□□□ 1.87
RARA-201ENST00000254066 KDM2BQ8NHM5 1336 aa26.72■■□□□ 1.87
RARA-201ENST00000254066 PLEKHH2Q8IVE3 1493 aa26.71■■□□□ 1.87
RARA-201ENST00000254066 ZCCHC11Q5TAX3 1644 aaKnown RBP26.71■■□□□ 1.87
RARA-201ENST00000254066 CENPQQ7L2Z9 268 aaPredicted RBP26.7■■□□□ 1.87
RARA-201ENST00000254066 NLRP13Q86W25 1043 aa26.7■■□□□ 1.87
RARA-201ENST00000254066 ABCA8O94911 1581 aa26.7■■□□□ 1.86
RARA-201ENST00000254066 POLR3GLQ9BT43 218 aa26.68■■□□□ 1.86
RARA-201ENST00000254066 PZPP20742 1482 aa26.68■■□□□ 1.86
RARA-201ENST00000254066 CRBNQ96SW2 442 aa26.67■■□□□ 1.86
RARA-201ENST00000254066 FRAT2O75474 233 aaPredicted RBP26.66■■□□□ 1.86
RARA-201ENST00000254066 EPRSP07814 1512 aaKnown RBP26.66■■□□□ 1.86
RARA-201ENST00000254066 KIAA1107Q9UPP5 1409 aa26.65■■□□□ 1.86
RARA-201ENST00000254066 CNGB1Q14028 1251 aaPredicted RBP26.65■■□□□ 1.86
RARA-201ENST00000254066 DCAF11Q8TEB1 546 aa26.65■■□□□ 1.86
RARA-201ENST00000254066 PARD3Q8TEW0 1356 aa26.65■■□□□ 1.86
RARA-201ENST00000254066 ABCC5O15440 1437 aa26.65■■□□□ 1.86
RARA-201ENST00000254066 SLC4A3P48751 1232 aa26.64■■□□□ 1.85
RARA-201ENST00000254066 C8orf34Q49A92 452 aa26.64■■□□□ 1.85
RARA-201ENST00000254066 BLMP54132 1417 aaPredicted RBP26.63■■□□□ 1.85
RARA-201ENST00000254066 ARHGEF12Q9NZN5 1544 aa26.63■■□□□ 1.85
RARA-201ENST00000254066 L1TD1Q5T7N2 865 aaKnown RBP26.62■■□□□ 1.85
RARA-201ENST00000254066 SENP3-EIF4A1A0A087X0R7 540 aa26.61■■□□□ 1.85
RARA-201ENST00000254066 WDR7Q9Y4E6 1490 aa26.61■■□□□ 1.85
RARA-201ENST00000254066 TSPOAP1O95153 1857 aa26.6■■□□□ 1.85
RARA-201ENST00000254066 MAP3K4Q9Y6R4 1608 aa26.55■■□□□ 1.84
RARA-201ENST00000254066 CDCA7LQ96GN5 454 aa26.55■■□□□ 1.84
RARA-201ENST00000254066 PLIN1O60240 522 aa26.55■■□□□ 1.84
RARA-201ENST00000254066 CARD11Q9BXL7 1154 aa26.53■■□□□ 1.84
RARA-201ENST00000254066 PPRC1Q5VV67 1664 aaKnown RBP26.52■■□□□ 1.84
RARA-201ENST00000254066 SKAP1Q86WV1 359 aa26.5■■□□□ 1.83
RARA-201ENST00000254066 ADGBQ8N7X0 1667 aa26.5■■□□□ 1.83
RARA-201ENST00000254066 VIRMAQ69YN4 1812 aaKnown RBP26.49■■□□□ 1.83
RARA-201ENST00000254066 PDE4CQ08493 712 aa26.48■■□□□ 1.83
RARA-201ENST00000254066 ZMYND15Q9H091 742 aa26.48■■□□□ 1.83
RARA-201ENST00000254066 RRAGDQ9NQL2 400 aaPredicted RBP26.48■■□□□ 1.83
RARA-201ENST00000254066 RAPGEF6Q8TEU7 1601 aa26.47■■□□□ 1.83
RARA-201ENST00000254066 ZNF326Q5BKZ1 582 aaKnown RBP26.47■■□□□ 1.83
RARA-201ENST00000254066 CDK13Q14004 1512 aaKnown RBP26.46■■□□□ 1.83
RARA-201ENST00000254066 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.46■■□□□ 1.83
RARA-201ENST00000254066 ADGRL2O95490 1459 aa26.46■■□□□ 1.83
RARA-201ENST00000254066 ATP10BO94823 1461 aa26.45■■□□□ 1.82
RARA-201ENST00000254066 ST20-MTHFSA0A0A6YYL1 179 aa26.45■■□□□ 1.82
RARA-201ENST00000254066 AEBP2Q6ZN18 517 aaPredicted RBP26.44■■□□□ 1.82
RARA-201ENST00000254066 RRP9O43818 475 aaKnown RBP26.43■■□□□ 1.82
RARA-201ENST00000254066 BECN1Q14457 450 aa26.43■■□□□ 1.82
RARA-201ENST00000254066 PER1O15534 1290 aaPredicted RBP26.41■■□□□ 1.82
RARA-201ENST00000254066 PDIA4P13667 645 aaKnown RBP26.41■■□□□ 1.82
RARA-201ENST00000254066 C20orf194Q5TEA3 1177 aa26.4■■□□□ 1.82
RARA-201ENST00000254066 POGKQ9P215 609 aa26.4■■□□□ 1.82
RARA-201ENST00000254066 EIF3AQ14152 1382 aaKnown RBP26.4■■□□□ 1.82
RARA-201ENST00000254066 CLCN1P35523 988 aa26.39■■□□□ 1.82
RARA-201ENST00000254066 CD109Q6YHK3 1445 aa26.39■■□□□ 1.82
RARA-201ENST00000254066 PKD2Q13563 968 aa26.39■■□□□ 1.81
RARA-201ENST00000254066 FGD1P98174 961 aa26.38■■□□□ 1.81
RARA-201ENST00000254066 NUP153P49790 1475 aaKnown RBP26.35■■□□□ 1.81
RARA-201ENST00000254066 PNNQ9H307 717 aaKnown RBP26.34■■□□□ 1.81
RARA-201ENST00000254066 USP19O94966 1318 aa26.33■■□□□ 1.81
RARA-201ENST00000254066 CROCC2H7BZ55 1655 aa26.33■■□□□ 1.81
RARA-201ENST00000254066 HSP90AA2PQ14568 343 aaPredicted RBP26.33■■□□□ 1.8
RARA-201ENST00000254066 HSP90AA1P07900 732 aaKnown RBP26.31■■□□□ 1.8
RARA-201ENST00000254066 DUSP27Q5VZP5 1158 aa26.31■■□□□ 1.8
RARA-201ENST00000254066 KDM5DQ9BY66 1539 aa26.31■■□□□ 1.8
RARA-201ENST00000254066 FSD2A1L4K1 749 aa26.3■■□□□ 1.8
RARA-201ENST00000254066 ITSN2Q9NZM3 1697 aa26.29■■□□□ 1.8
RARA-201ENST00000254066 ABCA9Q8IUA7 1624 aa26.29■■□□□ 1.8
RARA-201ENST00000254066 ARID3CA6NKF2 412 aa26.29■■□□□ 1.8
RARA-201ENST00000254066 CAMSAP2Q08AD1 1489 aa26.29■■□□□ 1.8
RARA-201ENST00000254066 ZNF644Q9H582 1327 aaPredicted RBP26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms