RNA–Protein interactions for RNA: ENST00000252486.8

APOE-201, Transcript of apolipoprotein E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOE, Length 1,208 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-201ENST00000252486 FAM135AQ9P2D6 1515 aa34.22■■■■□ 3.07
APOE-201ENST00000252486 DEPDC5O75140 1603 aa34.2■■■■□ 3.07
APOE-201ENST00000252486 ESF1Q9H501 851 aaKnown RBP34.19■■■■□ 3.06
APOE-201ENST00000252486 FER1L4A9Z1Z3 1794 aa34.17■■■■□ 3.06
APOE-201ENST00000252486 CNTLNQ9NXG0 1405 aa34.17■■■■□ 3.06
APOE-201ENST00000252486 PRDM15P57071 1507 aaPredicted RBP34.16■■■■□ 3.06
APOE-201ENST00000252486 MADDQ8WXG6 1647 aa34.15■■■■□ 3.06
APOE-201ENST00000252486 KANK1Q14678 1352 aa34.15■■■■□ 3.06
APOE-201ENST00000252486 MROH1Q8NDA8 1641 aa34.15■■■■□ 3.06
APOE-201ENST00000252486 SETD5Q9C0A6 1442 aa34.14■■■■□ 3.06
APOE-201ENST00000252486 ACIN1Q9UKV3 1341 aaKnown RBP34.14■■■■□ 3.06
APOE-201ENST00000252486 KDM4FA0A1W2PPD8 638 aa34.13■■■■□ 3.05
APOE-201ENST00000252486 UNC13BO14795 1591 aa34.13■■■■□ 3.05
APOE-201ENST00000252486 KDM5DQ9BY66 1539 aa34.12■■■■□ 3.05
APOE-201ENST00000252486 WASHC2CQ9Y4E1 1318 aa34.1■■■■□ 3.05
APOE-201ENST00000252486 ZC3H13Q5T200 1668 aaKnown RBP34.1■■■■□ 3.05
APOE-201ENST00000252486 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.09■■■■□ 3.054e-44■□□□□ 8.7
APOE-201ENST00000252486 RIMS1Q86UR5 1692 aaKnown RBP34.08■■■■□ 3.05
APOE-201ENST00000252486 VWDEQ8N2E2 1590 aa34.06■■■■□ 3.04
APOE-201ENST00000252486 MROH2AA6NES4 1674 aa34.06■■■■□ 3.04
APOE-201ENST00000252486 CLTCQ00610 1675 aaKnown RBP34.06■■■■□ 3.04
APOE-201ENST00000252486 ABCC3O15438 1527 aa34.04■■■■□ 3.04
APOE-201ENST00000252486 LMTK2Q8IWU2 1503 aa34.01■■■■□ 3.04
APOE-201ENST00000252486 HRCP23327 699 aa34.01■■■■□ 3.03
APOE-201ENST00000252486 NUP155O75694 1391 aa34■■■■□ 3.03
APOE-201ENST00000252486 RAB3GAP2Q9H2M9 1393 aa34■■■■□ 3.03
APOE-201ENST00000252486 PTPRMP28827 1452 aa34■■■■□ 3.03
APOE-201ENST00000252486 IQGAP3Q86VI3 1631 aa33.99■■■■□ 3.03
APOE-201ENST00000252486 CEP152O94986 1710 aa33.99■■■■□ 3.03
APOE-201ENST00000252486 ZMYM3Q14202 1370 aa33.98■■■■□ 3.03
APOE-201ENST00000252486 TRIM52Q96A61 297 aa33.96■■■■□ 3.03
APOE-201ENST00000252486 CAMSAP1Q5T5Y3 1602 aa33.93■■■■□ 3.02
APOE-201ENST00000252486 C3P01024 1663 aa33.93■■■■□ 3.02
APOE-201ENST00000252486 TET3O43151 1660 aa33.92■■■■□ 3.02
APOE-201ENST00000252486 ARHGAP31Q2M1Z3 1444 aa33.91■■■■□ 3.02
APOE-201ENST00000252486 PZPP20742 1482 aa33.89■■■■□ 3.02
APOE-201ENST00000252486 EFCAB6Q5THR3 1501 aa33.89■■■■□ 3.02
APOE-201ENST00000252486 RPRD2Q5VT52 1461 aaKnown RBP33.84■■■■□ 3.01
APOE-201ENST00000252486 CEBPAP49715 358 aaPredicted RBP33.84■■■■□ 3.01
APOE-201ENST00000252486 NPATQ14207 1427 aa33.84■■■■□ 3.01
APOE-201ENST00000252486 PCGF6Q9BYE7 350 aa33.83■■■■□ 3.01
APOE-201ENST00000252486 PLPPR3Q6T4P5 718 aa33.8■■■■□ 3
APOE-201ENST00000252486 SLC4A1APQ9BWU0 796 aaKnown RBP33.8■■■■□ 3
APOE-201ENST00000252486 E9PCH4 1651 aa33.76■■■□□ 2.99
APOE-201ENST00000252486 MPHOSPH9Q99550 1183 aa33.75■■■□□ 2.99
APOE-201ENST00000252486 SPATA31D1Q6ZQQ2 1576 aa33.75■■■□□ 2.99
APOE-201ENST00000252486 ERVK-7P63135 1459 aa33.75■■■□□ 2.99
APOE-201ENST00000252486 PREX1Q8TCU6 1659 aa33.74■■■□□ 2.99
APOE-201ENST00000252486 SETD1BQ9UPS6 1966 aaKnown RBP33.72■■■□□ 2.99
APOE-201ENST00000252486 FBXO31Q5XUX0 539 aaPredicted RBP33.72■■■□□ 2.99
APOE-201ENST00000252486 PKD2Q13563 968 aa33.71■■■□□ 2.99
APOE-201ENST00000252486 AEBP2Q6ZN18 517 aaPredicted RBP33.71■■■□□ 2.99
APOE-201ENST00000252486 TNRQ92752 1358 aa33.71■■■□□ 2.99
APOE-201ENST00000252486 NOS1P29475 1434 aa33.69■■■□□ 2.98
APOE-201ENST00000252486 CFAP65Q6ZU64 1925 aaKnown RBP33.67■■■□□ 2.98
APOE-201ENST00000252486 NLRP1Q9C000 1473 aa33.62■■■□□ 2.97
APOE-201ENST00000252486 PTPRTO14522 1441 aa33.62■■■□□ 2.97
APOE-201ENST00000252486 UHRF1BP1Q6BDS2 1440 aa33.62■■■□□ 2.97
APOE-201ENST00000252486 SPHKAPQ2M3C7 1700 aa33.61■■■□□ 2.97
APOE-201ENST00000252486 SLC52A1Q9NWF4 448 aa33.59■■■□□ 2.97
APOE-201ENST00000252486 MYO3AQ8NEV4 1616 aa33.59■■■□□ 2.97
APOE-201ENST00000252486 SYNMO15061 1565 aa33.59■■■□□ 2.97
APOE-201ENST00000252486 TRPM2O94759 1503 aa33.55■■■□□ 2.96
APOE-201ENST00000252486 A2ML1A8K2U0 1454 aa33.53■■■□□ 2.96
APOE-201ENST00000252486 ZNF142P52746 1687 aaPredicted RBP33.52■■■□□ 2.96
APOE-201ENST00000252486 FOXD1Q16676 465 aa33.51■■■□□ 2.95
APOE-201ENST00000252486 CEP170BQ9Y4F5 1589 aaPredicted RBP33.51■■■□□ 2.95
APOE-201ENST00000252486 PIK3C2BO00750 1634 aa33.5■■■□□ 2.95
APOE-201ENST00000252486 PLA2R1Q13018 1463 aa33.5■■■□□ 2.95
APOE-201ENST00000252486 IDI1Q13907 227 aa33.48■■■□□ 2.95
APOE-201ENST00000252486 LMTK3Q96Q04 1460 aa33.47■■■□□ 2.95
APOE-201ENST00000252486 KDM5AP29375 1690 aaKnown RBP33.45■■■□□ 2.95
APOE-201ENST00000252486 DHX57Q6P158 1386 aaKnown RBP33.45■■■□□ 2.94
APOE-201ENST00000252486 UGGT1Q9NYU2 1555 aa33.44■■■□□ 2.94
APOE-201ENST00000252486 ANKRD30BQ9BXX2 1392 aa33.43■■■□□ 2.94
APOE-201ENST00000252486 CCDC144AA2RUR9 1427 aa33.42■■■□□ 2.94
APOE-201ENST00000252486 THEMISQ8N1K5 641 aaPredicted RBP33.41■■■□□ 2.94
APOE-201ENST00000252486 STAG3Q9UJ98 1225 aa33.41■■■□□ 2.94
APOE-201ENST00000252486 CLTCL1P53675 1640 aa33.41■■■□□ 2.94
APOE-201ENST00000252486 ADGRB3O60242 1522 aa33.4■■■□□ 2.94
APOE-201ENST00000252486 UBR1Q8IWV7 1749 aa33.39■■■□□ 2.94
APOE-201ENST00000252486 TMEM131LA2VDJ0 1609 aa33.35■■■□□ 2.93
APOE-201ENST00000252486 KIF1BO60333 1816 aa33.34■■■□□ 2.93
APOE-201ENST00000252486 CHGAP10645 457 aaKnown RBP33.32■■■□□ 2.92
APOE-201ENST00000252486 NEURL4Q96JN8 1562 aa33.27■■■□□ 2.92
APOE-201ENST00000252486 HSPA2P54652 639 aa33.27■■■□□ 2.92
APOE-201ENST00000252486 SLIT1O75093 1534 aa33.26■■■□□ 2.91
APOE-201ENST00000252486 TMEM2Q9UHN6 1383 aa33.25■■■□□ 2.91
APOE-201ENST00000252486 MYO5BQ9ULV0 1848 aa33.25■■■□□ 2.91
APOE-201ENST00000252486 ARHGAP23Q9P227 1491 aa33.25■■■□□ 2.91
APOE-201ENST00000252486 HDGFP51858 240 aaKnown RBP33.23■■■□□ 2.91
APOE-201ENST00000252486 SPATA31E1Q6ZUB1 1445 aa33.2■■■□□ 2.91
APOE-201ENST00000252486 ZNF326Q5BKZ1 582 aaKnown RBP33.2■■■□□ 2.91
APOE-201ENST00000252486 ANKLE2Q86XL3 938 aa33.2■■■□□ 2.91
APOE-201ENST00000252486 EID1Q9Y6B2 187 aa33.2■■■□□ 2.91
APOE-201ENST00000252486 CLSPNQ9HAW4 1339 aa33.2■■■□□ 2.91
APOE-201ENST00000252486 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.18■■■□□ 2.9
APOE-201ENST00000252486 RPGRIP1LQ68CZ1 1315 aa33.18■■■□□ 2.9
APOE-201ENST00000252486 RIMS2Q9UQ26 1411 aa33.17■■■□□ 2.9
APOE-201ENST00000252486 ZFYVE9O95405 1425 aa33.15■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms