RNA–Protein interactions for RNA: ENST00000252456.6

CNN1-201, Transcript of calponin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNN1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-201ENST00000252456 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.91■■□□□ 1.1
CNN1-201ENST00000252456 CHIC2Q9UKJ5 165 aa21.91■■□□□ 1.1
CNN1-201ENST00000252456 LMTK3Q96Q04 1460 aa21.9■■□□□ 1.1
CNN1-201ENST00000252456 FAM135AQ9P2D6 1515 aa21.9■■□□□ 1.1
CNN1-201ENST00000252456 ERBINQ96RT1 1412 aa21.9■■□□□ 1.1
CNN1-201ENST00000252456 ANKRD30AQ9BXX3 1397 aa21.89■■□□□ 1.1
CNN1-201ENST00000252456 RRP7BPQ9NSQ0 103 aa21.89■■□□□ 1.09
CNN1-201ENST00000252456 ESF1Q9H501 851 aaKnown RBP21.88■■□□□ 1.09
CNN1-201ENST00000252456 PPP6R1Q9UPN7 881 aa21.88■■□□□ 1.09
CNN1-201ENST00000252456 KDM5DQ9BY66 1539 aa21.88■■□□□ 1.09
CNN1-201ENST00000252456 PREX1Q8TCU6 1659 aa21.87■■□□□ 1.09
CNN1-201ENST00000252456 ZMYM3Q14202 1370 aa21.87■■□□□ 1.09
CNN1-201ENST00000252456 DEPDC5O75140 1603 aa21.87■■□□□ 1.09
CNN1-201ENST00000252456 SETD1BQ9UPS6 1966 aaKnown RBP21.85■■□□□ 1.09
CNN1-201ENST00000252456 PRDM15P57071 1507 aaPredicted RBP21.84■■□□□ 1.09
CNN1-201ENST00000252456 ZC3H13Q5T200 1668 aaKnown RBP21.84■■□□□ 1.09
CNN1-201ENST00000252456 ABCC3O15438 1527 aa21.82■■□□□ 1.08
CNN1-201ENST00000252456 CEP152O94986 1710 aa21.82■■□□□ 1.08
CNN1-201ENST00000252456 NPATQ14207 1427 aa21.81■■□□□ 1.08
CNN1-201ENST00000252456 ROCK1Q13464 1354 aa21.8■■□□□ 1.08
CNN1-201ENST00000252456 WASHC2CQ9Y4E1 1318 aa21.78■■□□□ 1.08
CNN1-201ENST00000252456 ANKRD50Q9ULJ7 1429 aa21.78■■□□□ 1.08
CNN1-201ENST00000252456 PZPP20742 1482 aa21.77■■□□□ 1.08
CNN1-201ENST00000252456 CAMSAP1Q5T5Y3 1602 aa21.77■■□□□ 1.08
CNN1-201ENST00000252456 VWDEQ8N2E2 1590 aa21.77■■□□□ 1.08
CNN1-201ENST00000252456 ITGAEP38570 1179 aa21.76■■□□□ 1.07
CNN1-201ENST00000252456 UHRF1BP1Q6BDS2 1440 aa21.76■■□□□ 1.07
CNN1-201ENST00000252456 MYO3AQ8NEV4 1616 aa21.75■■□□□ 1.07
CNN1-201ENST00000252456 HSPA2P54652 639 aa21.73■■□□□ 1.07
CNN1-201ENST00000252456 ZNF142P52746 1687 aaPredicted RBP21.72■■□□□ 1.07
CNN1-201ENST00000252456 UNC13BO14795 1591 aa21.72■■□□□ 1.07
CNN1-201ENST00000252456 FBXO31Q5XUX0 539 aaPredicted RBP21.7■■□□□ 1.06
CNN1-201ENST00000252456 LMTK2Q8IWU2 1503 aa21.7■■□□□ 1.06
CNN1-201ENST00000252456 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.68■■□□□ 1.06
CNN1-201ENST00000252456 SPATA31D1Q6ZQQ2 1576 aa21.68■■□□□ 1.06
CNN1-201ENST00000252456 CEP170BQ9Y4F5 1589 aaPredicted RBP21.68■■□□□ 1.06
CNN1-201ENST00000252456 GCC2Q8IWJ2 1684 aa21.67■■□□□ 1.06
CNN1-201ENST00000252456 ARHGAP31Q2M1Z3 1444 aa21.66■■□□□ 1.06
CNN1-201ENST00000252456 CFAP65Q6ZU64 1925 aaKnown RBP21.66■■□□□ 1.06
CNN1-201ENST00000252456 ERVK-7P63135 1459 aa21.66■■□□□ 1.06
CNN1-201ENST00000252456 KANK1Q14678 1352 aa21.65■■□□□ 1.06
CNN1-201ENST00000252456 TNRQ92752 1358 aa21.65■■□□□ 1.06
CNN1-201ENST00000252456 STRCQ7RTU9 1775 aa21.65■■□□□ 1.06
CNN1-201ENST00000252456 EFCAB6Q5THR3 1501 aa21.65■■□□□ 1.06
CNN1-201ENST00000252456 NAIPQ13075 1403 aa21.64■■□□□ 1.06
CNN1-201ENST00000252456 IQGAP3Q86VI3 1631 aa21.62■■□□□ 1.05
CNN1-201ENST00000252456 A2ML1A8K2U0 1454 aa21.62■■□□□ 1.05
CNN1-201ENST00000252456 TET3O43151 1660 aa21.61■■□□□ 1.05
CNN1-201ENST00000252456 HFM1A2PYH4 1435 aa21.6■■□□□ 1.05
CNN1-201ENST00000252456 NLRP1Q9C000 1473 aa21.59■■□□□ 1.05
CNN1-201ENST00000252456 E9PCH4 1651 aa21.55■■□□□ 1.04
CNN1-201ENST00000252456 SYNMO15061 1565 aa21.55■■□□□ 1.04
CNN1-201ENST00000252456 PLA2R1Q13018 1463 aa21.54■■□□□ 1.04
CNN1-201ENST00000252456 RPRD2Q5VT52 1461 aaKnown RBP21.54■■□□□ 1.04
CNN1-201ENST00000252456 NOS1P29475 1434 aa21.54■■□□□ 1.04
CNN1-201ENST00000252456 NUP155O75694 1391 aa21.53■■□□□ 1.04
CNN1-201ENST00000252456 UGGT1Q9NYU2 1555 aa21.53■■□□□ 1.04
CNN1-201ENST00000252456 UBR1Q8IWV7 1749 aa21.52■■□□□ 1.04
CNN1-201ENST00000252456 PIK3C2BO00750 1634 aa21.5■■□□□ 1.03
CNN1-201ENST00000252456 POLR1AO95602 1720 aaPredicted RBP21.47■■□□□ 1.03
CNN1-201ENST00000252456 KDM5AP29375 1690 aaKnown RBP21.46■■□□□ 1.03
CNN1-201ENST00000252456 NEURL4Q96JN8 1562 aa21.46■■□□□ 1.03
CNN1-201ENST00000252456 PTPRTO14522 1441 aa21.45■■□□□ 1.02
CNN1-201ENST00000252456 NCKAP5LQ9HCH0 1330 aa21.43■■□□□ 1.02
CNN1-201ENST00000252456 THEMISQ8N1K5 641 aaPredicted RBP21.42■■□□□ 1.02
CNN1-201ENST00000252456 IDI1Q13907 227 aa21.41■■□□□ 1.02
CNN1-201ENST00000252456 SPHKAPQ2M3C7 1700 aa21.41■■□□□ 1.02
CNN1-201ENST00000252456 ADGRB3O60242 1522 aa21.41■■□□□ 1.02
CNN1-201ENST00000252456 PKD2Q13563 968 aa21.4■■□□□ 1.02
CNN1-201ENST00000252456 DMRT2Q9Y5R5 561 aa21.4■■□□□ 1.02
CNN1-201ENST00000252456 SLIT1O75093 1534 aa21.4■■□□□ 1.02
CNN1-201ENST00000252456 ARHGAP23Q9P227 1491 aa21.4■■□□□ 1.02
CNN1-201ENST00000252456 MYO5BQ9ULV0 1848 aa21.39■■□□□ 1.01
CNN1-201ENST00000252456 SLC52A1Q9NWF4 448 aa21.38■■□□□ 1.01
CNN1-201ENST00000252456 SETD5Q9C0A6 1442 aa21.37■■□□□ 1.01
CNN1-201ENST00000252456 MED14O60244 1454 aa21.36■■□□□ 1.01
CNN1-201ENST00000252456 TMEM131LA2VDJ0 1609 aa21.36■■□□□ 1.01
CNN1-201ENST00000252456 TRIM52Q96A61 297 aa21.34■■□□□ 1.01
CNN1-201ENST00000252456 ANKLE2Q86XL3 938 aa21.33■■□□□ 1.01
CNN1-201ENST00000252456 IQGAP1P46940 1657 aa21.33■■□□□ 1.01
CNN1-201ENST00000252456 TMEM2Q9UHN6 1383 aa21.33■■□□□ 1.01
CNN1-201ENST00000252456 SCAF11Q99590 1463 aaKnown RBP21.32■■□□□ 1
CNN1-201ENST00000252456 TRPM2O94759 1503 aa21.32■■□□□ 1
CNN1-201ENST00000252456 RAB3GAP2Q9H2M9 1393 aa21.32■■□□□ 1
CNN1-201ENST00000252456 LTBP4Q8N2S1 1624 aa21.31■■□□□ 1
CNN1-201ENST00000252456 NPHP4O75161 1426 aaPredicted RBP21.31■■□□□ 1
CNN1-201ENST00000252456 LTKP29376 864 aa21.3■■□□□ 1
CNN1-201ENST00000252456 CLTCL1P53675 1640 aa21.3■■□□□ 1
CNN1-201ENST00000252456 SLC4A1APQ9BWU0 796 aaKnown RBP21.29■■□□□ 1
CNN1-201ENST00000252456 STAG3Q9UJ98 1225 aa21.29■■□□□ 1
CNN1-201ENST00000252456 ZFYVE9O95405 1425 aa21.27■■□□□ 1
CNN1-201ENST00000252456 TXNDC2Q86VQ3 553 aa21.26■□□□□ 0.99
CNN1-201ENST00000252456 ZNF335Q9H4Z2 1342 aaPredicted RBP21.25■□□□□ 0.99
CNN1-201ENST00000252456 MPHOSPH9Q99550 1183 aa21.23■□□□□ 0.99
CNN1-201ENST00000252456 FOXD1Q16676 465 aa21.22■□□□□ 0.99
CNN1-201ENST00000252456 EID1Q9Y6B2 187 aa21.22■□□□□ 0.99
CNN1-201ENST00000252456 ACIN1Q9UKV3 1341 aaKnown RBP21.22■□□□□ 0.99
CNN1-201ENST00000252456 RIMS2Q9UQ26 1411 aa21.22■□□□□ 0.99
CNN1-201ENST00000252456 KIF1BO60333 1816 aa21.21■□□□□ 0.99
CNN1-201ENST00000252456 STRCP1A6NGW2 1772 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms