RNA–Protein interactions for RNA: ENST00000252136.11

TRMT2A-201, Transcript of tRNA methyltransferase 2 homolog A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRMT2A, Length 2,964 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT2A-201ENST00000252136 RGS3P49796 1198 aa25.55■■□□□ 1.68
TRMT2A-201ENST00000252136 FRAT2O75474 233 aaPredicted RBP25.55■■□□□ 1.68
TRMT2A-201ENST00000252136 CAMSAP2Q08AD1 1489 aa25.55■■□□□ 1.68
TRMT2A-201ENST00000252136 UHRF1BP1Q6BDS2 1440 aa25.55■■□□□ 1.68
TRMT2A-201ENST00000252136 PRG4Q92954 1404 aaPredicted RBP25.54■■□□□ 1.68
TRMT2A-201ENST00000252136 PARD3Q8TEW0 1356 aa25.54■■□□□ 1.68
TRMT2A-201ENST00000252136 ANKRD30AQ9BXX3 1397 aa25.54■■□□□ 1.68
TRMT2A-201ENST00000252136 ANKRD50Q9ULJ7 1429 aa25.53■■□□□ 1.68
TRMT2A-201ENST00000252136 RGL3Q3MIN7 710 aa25.53■■□□□ 1.68
TRMT2A-201ENST00000252136 FAM161AQ3B820 660 aa25.5■■□□□ 1.67
TRMT2A-201ENST00000252136 PER1O15534 1290 aaPredicted RBP25.5■■□□□ 1.67
TRMT2A-201ENST00000252136 NUP153P49790 1475 aaKnown RBP25.49■■□□□ 1.67
TRMT2A-201ENST00000252136 NBPF1Q3BBV0 1214 aa25.48■■□□□ 1.67
TRMT2A-201ENST00000252136 CENPQQ7L2Z9 268 aaPredicted RBP25.48■■□□□ 1.67
TRMT2A-201ENST00000252136 PDS5BQ9NTI5 1447 aa25.47■■□□□ 1.67
TRMT2A-201ENST00000252136 KIAA0586Q9BVV6 1533 aa25.47■■□□□ 1.67
TRMT2A-201ENST00000252136 C8orf34Q49A92 452 aa25.47■■□□□ 1.67
TRMT2A-201ENST00000252136 PANK3Q9H999 370 aa25.47■■□□□ 1.67
TRMT2A-201ENST00000252136 KDM2BQ8NHM5 1336 aa25.47■■□□□ 1.67
TRMT2A-201ENST00000252136 ADAMTS8Q9UP79 889 aa25.45■■□□□ 1.66
TRMT2A-201ENST00000252136 GPATCH8Q9UKJ3 1502 aaKnown RBP25.4■■□□□ 1.66
TRMT2A-201ENST00000252136 TROQ12816 1431 aaPredicted RBP25.39■■□□□ 1.66
TRMT2A-201ENST00000252136 TSPY4P0CV99 314 aa25.38■■□□□ 1.65
TRMT2A-201ENST00000252136 TSPY10P0CW01 314 aa25.38■■□□□ 1.65
TRMT2A-201ENST00000252136 ARHGEF12Q9NZN5 1544 aa25.38■■□□□ 1.65
TRMT2A-201ENST00000252136 E9PCH4 1651 aa25.37■■□□□ 1.65
TRMT2A-201ENST00000252136 ADGBQ8N7X0 1667 aa25.37■■□□□ 1.65
TRMT2A-201ENST00000252136 BLMP54132 1417 aaPredicted RBP25.37■■□□□ 1.65
TRMT2A-201ENST00000252136 UBE2Q2Q8WVN8 375 aa25.36■■□□□ 1.65
TRMT2A-201ENST00000252136 ADGRL2O95490 1459 aa25.36■■□□□ 1.65
TRMT2A-201ENST00000252136 WDR43Q15061 677 aaKnown RBP eCLIP25.35■■□□□ 1.654e-8■■■■□ 21.4
TRMT2A-201ENST00000252136 DISP3Q9P2K9 1392 aa25.35■■□□□ 1.65
TRMT2A-201ENST00000252136 DUSP27Q5VZP5 1158 aa25.35■■□□□ 1.65
TRMT2A-201ENST00000252136 TARBP1Q13395 1621 aaKnown RBP25.34■■□□□ 1.65
TRMT2A-201ENST00000252136 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.34■■□□□ 1.65
TRMT2A-201ENST00000252136 RAPGEF6Q8TEU7 1601 aa25.33■■□□□ 1.65
TRMT2A-201ENST00000252136 DISP1Q96F81 1524 aa25.33■■□□□ 1.64
TRMT2A-201ENST00000252136 DNAJC5BQ9UF47 199 aa25.32■■□□□ 1.64
TRMT2A-201ENST00000252136 PBRM1Q86U86 1689 aa25.32■■□□□ 1.64
TRMT2A-201ENST00000252136 PLEKHH1Q9ULM0 1364 aa25.31■■□□□ 1.64
TRMT2A-201ENST00000252136 ADAMTS12P58397 1594 aa25.31■■□□□ 1.64
TRMT2A-201ENST00000252136 GOLGA2Q08379 1002 aa25.31■■□□□ 1.64
TRMT2A-201ENST00000252136 C9orf84Q5VXU9 1444 aa25.3■■□□□ 1.64
TRMT2A-201ENST00000252136 HNRNPMP52272 730 aaKnown RBP eCLIP25.3■■□□□ 1.64
TRMT2A-201ENST00000252136 ZMYM4Q5VZL5 1548 aa25.29■■□□□ 1.64
TRMT2A-201ENST00000252136 KIAA0556O60303 1618 aa25.29■■□□□ 1.64
TRMT2A-201ENST00000252136 ARXQ96QS3 562 aa25.29■■□□□ 1.64
TRMT2A-201ENST00000252136 TESK2Q96S53 571 aa25.29■■□□□ 1.64
TRMT2A-201ENST00000252136 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.29■■□□□ 1.64
TRMT2A-201ENST00000252136 POGKQ9P215 609 aa25.29■■□□□ 1.64
TRMT2A-201ENST00000252136 SLKQ9H2G2 1235 aaPredicted RBP25.28■■□□□ 1.64
TRMT2A-201ENST00000252136 TMF1P82094 1093 aa25.27■■□□□ 1.64
TRMT2A-201ENST00000252136 PLB1Q6P1J6 1458 aa25.27■■□□□ 1.64
TRMT2A-201ENST00000252136 CCDC146Q8IYE0 955 aa25.27■■□□□ 1.64
TRMT2A-201ENST00000252136 FAM43AQ8N2R8 423 aa25.27■■□□□ 1.64
TRMT2A-201ENST00000252136 PRAG1Q86YV5 1406 aa25.27■■□□□ 1.64
TRMT2A-201ENST00000252136 ITSN2Q9NZM3 1697 aa25.26■■□□□ 1.63
TRMT2A-201ENST00000252136 CCDC144AA2RUR9 1427 aa25.25■■□□□ 1.63
TRMT2A-201ENST00000252136 PLEKHH2Q8IVE3 1493 aa25.24■■□□□ 1.63
TRMT2A-201ENST00000252136 RSPH6AQ9H0K4 717 aa25.24■■□□□ 1.63
TRMT2A-201ENST00000252136 KNSTRNQ9Y448 316 aa25.23■■□□□ 1.63
TRMT2A-201ENST00000252136 PLEKHD1A6NEE1 506 aa25.23■■□□□ 1.63
TRMT2A-201ENST00000252136 BCAR3O75815 825 aa25.23■■□□□ 1.63
TRMT2A-201ENST00000252136 PPP2R1AP30153 589 aa25.22■■□□□ 1.63
TRMT2A-201ENST00000252136 CROCC2H7BZ55 1655 aa25.22■■□□□ 1.63
TRMT2A-201ENST00000252136 CEP170Q5SW79 1584 aa25.22■■□□□ 1.63
TRMT2A-201ENST00000252136 ZNF608Q9ULD9 1512 aaPredicted RBP25.22■■□□□ 1.63
TRMT2A-201ENST00000252136 COL17A1Q9UMD9 1497 aaPredicted RBP25.21■■□□□ 1.63
TRMT2A-201ENST00000252136 ERBINQ96RT1 1412 aa25.21■■□□□ 1.63
TRMT2A-201ENST00000252136 SEC24BO95487 1268 aa25.2■■□□□ 1.62
TRMT2A-201ENST00000252136 IGHDP01880 384 aa25.19■■□□□ 1.62
TRMT2A-201ENST00000252136 INSRP06213 1382 aa25.19■■□□□ 1.62
TRMT2A-201ENST00000252136 KDM5DQ9BY66 1539 aa25.19■■□□□ 1.62
TRMT2A-201ENST00000252136 SPINK5Q9NQ38 1064 aaPredicted RBP25.18■■□□□ 1.62
TRMT2A-201ENST00000252136 SLFN5Q08AF3 891 aa25.17■■□□□ 1.62
TRMT2A-201ENST00000252136 FBLN2P98095 1184 aa25.17■■□□□ 1.62
TRMT2A-201ENST00000252136 TRPM1Q7Z4N2 1603 aa25.15■■□□□ 1.62
TRMT2A-201ENST00000252136 APAF1O14727 1248 aa25.15■■□□□ 1.62
TRMT2A-201ENST00000252136 BECN1Q14457 450 aa25.14■■□□□ 1.62
TRMT2A-201ENST00000252136 CANXP27824 592 aaKnown RBP25.14■■□□□ 1.62
TRMT2A-201ENST00000252136 USP19O94966 1318 aa25.14■■□□□ 1.62
TRMT2A-201ENST00000252136 ZNF521Q96K83 1311 aa25.14■■□□□ 1.62
TRMT2A-201ENST00000252136 RRAGDQ9NQL2 400 aaPredicted RBP25.11■■□□□ 1.61
TRMT2A-201ENST00000252136 GPRASP1Q5JY77 1395 aa25.1■■□□□ 1.61
TRMT2A-201ENST00000252136 PTPRGP23470 1445 aa25.1■■□□□ 1.61
TRMT2A-201ENST00000252136 SPRYD3Q8NCJ5 442 aa25.1■■□□□ 1.61
TRMT2A-201ENST00000252136 FAM135AQ9P2D6 1515 aa25.1■■□□□ 1.61
TRMT2A-201ENST00000252136 A2MP01023 1474 aa25.1■■□□□ 1.61
TRMT2A-201ENST00000252136 COG6Q9Y2V7 657 aa25.09■■□□□ 1.61
TRMT2A-201ENST00000252136 PANK1Q8TE04 598 aa25.08■■□□□ 1.61
TRMT2A-201ENST00000252136 SHANK2Q9UPX8 1470 aa25.07■■□□□ 1.6
TRMT2A-201ENST00000252136 AMER1Q5JTC6 1135 aaPredicted RBP25.07■■□□□ 1.6
TRMT2A-201ENST00000252136 CDC42BPAQ5VT25 1732 aa25.07■■□□□ 1.6
TRMT2A-201ENST00000252136 CHMP7Q8WUX9 453 aaPredicted RBP25.06■■□□□ 1.6
TRMT2A-201ENST00000252136 EIF3AQ14152 1382 aaKnown RBP25.06■■□□□ 1.6
TRMT2A-201ENST00000252136 MAGI2Q86UL8 1455 aa25.05■■□□□ 1.6
TRMT2A-201ENST00000252136 GZF1Q9H116 711 aaPredicted RBP25.05■■□□□ 1.6
TRMT2A-201ENST00000252136 DMRT2Q9Y5R5 561 aa25.05■■□□□ 1.6
TRMT2A-201ENST00000252136 L1TD1Q5T7N2 865 aaKnown RBP25.05■■□□□ 1.6
TRMT2A-201ENST00000252136 CLUAP1Q96AJ1 413 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms