RNA–Protein interactions for RNA: ENST00000249289.4

ATP6V1F-201, Transcript of ATPase H+ transporting V1 subunit F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP6V1F, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1F-201ENST00000249289 NAIPQ13075 1403 aa22.88■■□□□ 1.25
ATP6V1F-201ENST00000249289 PRDM15P57071 1507 aaPredicted RBP22.87■■□□□ 1.25
ATP6V1F-201ENST00000249289 MROH1Q8NDA8 1641 aa22.86■■□□□ 1.25
ATP6V1F-201ENST00000249289 GGT6Q6P531 493 aa22.84■■□□□ 1.25
ATP6V1F-201ENST00000249289 PPP6R1Q9UPN7 881 aa22.84■■□□□ 1.25
ATP6V1F-201ENST00000249289 RIMS1Q86UR5 1692 aaKnown RBP22.84■■□□□ 1.25
ATP6V1F-201ENST00000249289 CNTLNQ9NXG0 1405 aa22.83■■□□□ 1.25
ATP6V1F-201ENST00000249289 KDM4FA0A1W2PPD8 638 aa22.83■■□□□ 1.25
ATP6V1F-201ENST00000249289 UNC13BO14795 1591 aa22.83■■□□□ 1.25
ATP6V1F-201ENST00000249289 ZC3H13Q5T200 1668 aaKnown RBP22.83■■□□□ 1.24
ATP6V1F-201ENST00000249289 KDM5DQ9BY66 1539 aa22.82■■□□□ 1.24
ATP6V1F-201ENST00000249289 MROH2AA6NES4 1674 aa22.81■■□□□ 1.24
ATP6V1F-201ENST00000249289 ESF1Q9H501 851 aaKnown RBP22.8■■□□□ 1.24
ATP6V1F-201ENST00000249289 CLTCQ00610 1675 aaKnown RBP22.8■■□□□ 1.24
ATP6V1F-201ENST00000249289 ABCC3O15438 1527 aa22.77■■□□□ 1.24
ATP6V1F-201ENST00000249289 KANK1Q14678 1352 aa22.77■■□□□ 1.24
ATP6V1F-201ENST00000249289 VWDEQ8N2E2 1590 aa22.77■■□□□ 1.24
ATP6V1F-201ENST00000249289 TRIM26Q12899 539 aaPredicted RBP22.77■■□□□ 1.24
ATP6V1F-201ENST00000249289 PTPRMP28827 1452 aa22.77■■□□□ 1.24
ATP6V1F-201ENST00000249289 CEP152O94986 1710 aa22.75■■□□□ 1.23
ATP6V1F-201ENST00000249289 SETD5Q9C0A6 1442 aa22.74■■□□□ 1.23
ATP6V1F-201ENST00000249289 WASHC2CQ9Y4E1 1318 aa22.74■■□□□ 1.23
ATP6V1F-201ENST00000249289 LMTK2Q8IWU2 1503 aa22.72■■□□□ 1.23
ATP6V1F-201ENST00000249289 CAMSAP1Q5T5Y3 1602 aa22.72■■□□□ 1.23
ATP6V1F-201ENST00000249289 IQGAP3Q86VI3 1631 aa22.72■■□□□ 1.23
ATP6V1F-201ENST00000249289 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.72■■□□□ 1.23
ATP6V1F-201ENST00000249289 C3P01024 1663 aa22.71■■□□□ 1.23
ATP6V1F-201ENST00000249289 ZMYM3Q14202 1370 aa22.68■■□□□ 1.22
ATP6V1F-201ENST00000249289 ACIN1Q9UKV3 1341 aaKnown RBP22.68■■□□□ 1.22
ATP6V1F-201ENST00000249289 TET3O43151 1660 aa22.68■■□□□ 1.22
ATP6V1F-201ENST00000249289 NUP155O75694 1391 aa22.67■■□□□ 1.22
ATP6V1F-201ENST00000249289 EFCAB6Q5THR3 1501 aa22.67■■□□□ 1.22
ATP6V1F-201ENST00000249289 PZPP20742 1482 aa22.66■■□□□ 1.22
ATP6V1F-201ENST00000249289 RAB3GAP2Q9H2M9 1393 aa22.66■■□□□ 1.22
ATP6V1F-201ENST00000249289 ARHGAP31Q2M1Z3 1444 aa22.65■■□□□ 1.22
ATP6V1F-201ENST00000249289 NPATQ14207 1427 aa22.63■■□□□ 1.21
ATP6V1F-201ENST00000249289 RPRD2Q5VT52 1461 aaKnown RBP22.6■■□□□ 1.21
ATP6V1F-201ENST00000249289 CEBPAP49715 358 aaPredicted RBP22.6■■□□□ 1.21
ATP6V1F-201ENST00000249289 TRIM52Q96A61 297 aa22.6■■□□□ 1.21
ATP6V1F-201ENST00000249289 HRCP23327 699 aa22.59■■□□□ 1.21
ATP6V1F-201ENST00000249289 PLPPR3Q6T4P5 718 aa22.58■■□□□ 1.21
ATP6V1F-201ENST00000249289 SPATA31D1Q6ZQQ2 1576 aa22.58■■□□□ 1.2
ATP6V1F-201ENST00000249289 PREX1Q8TCU6 1659 aa22.58■■□□□ 1.2
ATP6V1F-201ENST00000249289 ERVK-7P63135 1459 aa22.57■■□□□ 1.2
ATP6V1F-201ENST00000249289 E9PCH4 1651 aa22.57■■□□□ 1.2
ATP6V1F-201ENST00000249289 AEBP2Q6ZN18 517 aaPredicted RBP22.55■■□□□ 1.2
ATP6V1F-201ENST00000249289 SETD1BQ9UPS6 1966 aaKnown RBP22.53■■□□□ 1.2
ATP6V1F-201ENST00000249289 TNRQ92752 1358 aa22.52■■□□□ 1.2
ATP6V1F-201ENST00000249289 MYO3AQ8NEV4 1616 aa22.52■■□□□ 1.2
ATP6V1F-201ENST00000249289 FBXO31Q5XUX0 539 aaPredicted RBP22.51■■□□□ 1.19
ATP6V1F-201ENST00000249289 SLC4A1APQ9BWU0 796 aaKnown RBP22.51■■□□□ 1.19
ATP6V1F-201ENST00000249289 NOS1P29475 1434 aa22.5■■□□□ 1.19
ATP6V1F-201ENST00000249289 CFAP65Q6ZU64 1925 aaKnown RBP22.49■■□□□ 1.19
ATP6V1F-201ENST00000249289 UHRF1BP1Q6BDS2 1440 aa22.48■■□□□ 1.19
ATP6V1F-201ENST00000249289 ZNF142P52746 1687 aaPredicted RBP22.48■■□□□ 1.19
ATP6V1F-201ENST00000249289 NLRP1Q9C000 1473 aa22.47■■□□□ 1.19
ATP6V1F-201ENST00000249289 SYNMO15061 1565 aa22.47■■□□□ 1.19
ATP6V1F-201ENST00000249289 SPHKAPQ2M3C7 1700 aa22.47■■□□□ 1.19
ATP6V1F-201ENST00000249289 PKD2Q13563 968 aa22.46■■□□□ 1.19
ATP6V1F-201ENST00000249289 MPHOSPH9Q99550 1183 aa22.46■■□□□ 1.19
ATP6V1F-201ENST00000249289 PCGF6Q9BYE7 350 aa22.45■■□□□ 1.18
ATP6V1F-201ENST00000249289 CEP170BQ9Y4F5 1589 aaPredicted RBP22.45■■□□□ 1.18
ATP6V1F-201ENST00000249289 TRPM2O94759 1503 aa22.43■■□□□ 1.18
ATP6V1F-201ENST00000249289 LMTK3Q96Q04 1460 aa22.43■■□□□ 1.18
ATP6V1F-201ENST00000249289 PTPRTO14522 1441 aa22.43■■□□□ 1.18
ATP6V1F-201ENST00000249289 A2ML1A8K2U0 1454 aa22.42■■□□□ 1.18
ATP6V1F-201ENST00000249289 PIK3C2BO00750 1634 aa22.42■■□□□ 1.18
ATP6V1F-201ENST00000249289 SLC52A1Q9NWF4 448 aa22.38■■□□□ 1.17
ATP6V1F-201ENST00000249289 KDM5AP29375 1690 aaKnown RBP22.38■■□□□ 1.17
ATP6V1F-201ENST00000249289 UGGT1Q9NYU2 1555 aa22.37■■□□□ 1.17
ATP6V1F-201ENST00000249289 PLA2R1Q13018 1463 aa22.36■■□□□ 1.17
ATP6V1F-201ENST00000249289 UBR1Q8IWV7 1749 aa22.35■■□□□ 1.17
ATP6V1F-201ENST00000249289 ADGRB3O60242 1522 aa22.35■■□□□ 1.17
ATP6V1F-201ENST00000249289 FOXD1Q16676 465 aa22.34■■□□□ 1.17
ATP6V1F-201ENST00000249289 CLTCL1P53675 1640 aa22.34■■□□□ 1.17
ATP6V1F-201ENST00000249289 IDI1Q13907 227 aa22.32■■□□□ 1.16
ATP6V1F-201ENST00000249289 CCDC144AA2RUR9 1427 aa22.31■■□□□ 1.16
ATP6V1F-201ENST00000249289 TMEM131LA2VDJ0 1609 aa22.29■■□□□ 1.16
ATP6V1F-201ENST00000249289 DHX57Q6P158 1386 aaKnown RBP22.28■■□□□ 1.16
ATP6V1F-201ENST00000249289 ANKRD30BQ9BXX2 1392 aa22.27■■□□□ 1.16
ATP6V1F-201ENST00000249289 KIF1BO60333 1816 aa22.27■■□□□ 1.16
ATP6V1F-201ENST00000249289 THEMISQ8N1K5 641 aaPredicted RBP22.27■■□□□ 1.16
ATP6V1F-201ENST00000249289 STAG3Q9UJ98 1225 aa22.27■■□□□ 1.16
ATP6V1F-201ENST00000249289 HSPA2P54652 639 aa22.26■■□□□ 1.15
ATP6V1F-201ENST00000249289 SLIT1O75093 1534 aa22.25■■□□□ 1.15
ATP6V1F-201ENST00000249289 MYO5BQ9ULV0 1848 aa22.24■■□□□ 1.15
ATP6V1F-201ENST00000249289 ARHGAP23Q9P227 1491 aa22.23■■□□□ 1.15
ATP6V1F-201ENST00000249289 NEURL4Q96JN8 1562 aa22.22■■□□□ 1.15
ATP6V1F-201ENST00000249289 POLR1AO95602 1720 aaPredicted RBP22.21■■□□□ 1.15
ATP6V1F-201ENST00000249289 CHGAP10645 457 aaKnown RBP22.21■■□□□ 1.15
ATP6V1F-201ENST00000249289 TMEM2Q9UHN6 1383 aa22.21■■□□□ 1.15
ATP6V1F-201ENST00000249289 STRCQ7RTU9 1775 aa22.17■■□□□ 1.14
ATP6V1F-201ENST00000249289 SPATA31E1Q6ZUB1 1445 aa22.17■■□□□ 1.14
ATP6V1F-201ENST00000249289 SCAF11Q99590 1463 aaKnown RBP22.16■■□□□ 1.14
ATP6V1F-201ENST00000249289 ZFYVE9O95405 1425 aa22.16■■□□□ 1.14
ATP6V1F-201ENST00000249289 RIMS2Q9UQ26 1411 aa22.15■■□□□ 1.14
ATP6V1F-201ENST00000249289 ANKLE2Q86XL3 938 aa22.15■■□□□ 1.14
ATP6V1F-201ENST00000249289 NEXMIFQ5QGS0 1516 aa22.13■■□□□ 1.13
ATP6V1F-201ENST00000249289 EID1Q9Y6B2 187 aa22.13■■□□□ 1.13
ATP6V1F-201ENST00000249289 MED14O60244 1454 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms