RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.35■■■■□ 3.573e-10■■■□□ 16.3
SDF2L1-201ENST00000248958 RNF17Q9BXT8 1623 aaKnown RBP37.35■■■■□ 3.57
SDF2L1-201ENST00000248958 ERBINQ96RT1 1412 aa37.34■■■■□ 3.57
SDF2L1-201ENST00000248958 ADGRL2O95490 1459 aa37.33■■■■□ 3.57
SDF2L1-201ENST00000248958 RRP7BPQ9NSQ0 103 aa37.33■■■■□ 3.57
SDF2L1-201ENST00000248958 PREX1Q8TCU6 1659 aa37.33■■■■□ 3.57
SDF2L1-201ENST00000248958 LMTK3Q96Q04 1460 aa37.32■■■■□ 3.56
SDF2L1-201ENST00000248958 NCOA1Q15788 1441 aa37.31■■■■□ 3.56
SDF2L1-201ENST00000248958 CHIC2Q9UKJ5 165 aa37.31■■■■□ 3.56
SDF2L1-201ENST00000248958 KDM5DQ9BY66 1539 aa37.31■■■■□ 3.56
SDF2L1-201ENST00000248958 ILDR1Q86SU0 546 aaPredicted RBP37.29■■■■□ 3.56
SDF2L1-201ENST00000248958 NPATQ14207 1427 aa37.27■■■■□ 3.56
SDF2L1-201ENST00000248958 WASHC2CQ9Y4E1 1318 aa37.25■■■■□ 3.55
SDF2L1-201ENST00000248958 ZC3H13Q5T200 1668 aaKnown RBP37.24■■■■□ 3.55
SDF2L1-201ENST00000248958 UHRF1BP1Q6BDS2 1440 aa37.22■■■■□ 3.55
SDF2L1-201ENST00000248958 RRBP1Q9P2E9 1410 aaKnown RBP37.22■■■■□ 3.55
SDF2L1-201ENST00000248958 MROH1Q8NDA8 1641 aa37.19■■■■□ 3.54
SDF2L1-201ENST00000248958 PTPRKQ15262 1439 aa37.17■■■■□ 3.54
SDF2L1-201ENST00000248958 ROCK1Q13464 1354 aa37.17■■■■□ 3.54
SDF2L1-201ENST00000248958 DEPDC5O75140 1603 aa37.15■■■■□ 3.54
SDF2L1-201ENST00000248958 PRDM15P57071 1507 aaPredicted RBP37.15■■■■□ 3.54
SDF2L1-201ENST00000248958 ABCC3O15438 1527 aa37.13■■■■□ 3.53
SDF2L1-201ENST00000248958 PZPP20742 1482 aa37.13■■■■□ 3.53
SDF2L1-201ENST00000248958 ANKRD50Q9ULJ7 1429 aa37.1■■■■□ 3.53
SDF2L1-201ENST00000248958 CEP152O94986 1710 aa37.08■■■■□ 3.53
SDF2L1-201ENST00000248958 KANK1Q14678 1352 aa37.08■■■■□ 3.53
SDF2L1-201ENST00000248958 HSPA2P54652 639 aa37.07■■■■□ 3.52
SDF2L1-201ENST00000248958 ITGAEP38570 1179 aa37.06■■■■□ 3.52
SDF2L1-201ENST00000248958 CAMSAP1Q5T5Y3 1602 aa37.04■■■■□ 3.52
SDF2L1-201ENST00000248958 MYO3AQ8NEV4 1616 aa37.03■■■■□ 3.52
SDF2L1-201ENST00000248958 GRWD1Q9BQ67 446 aaKnown RBP eCLIP37.01■■■■□ 3.52
SDF2L1-201ENST00000248958 ZNF142P52746 1687 aaPredicted RBP37.01■■■■□ 3.52
SDF2L1-201ENST00000248958 VWDEQ8N2E2 1590 aa36.98■■■■□ 3.51
SDF2L1-201ENST00000248958 TNRQ92752 1358 aa36.97■■■■□ 3.51
SDF2L1-201ENST00000248958 FBXO31Q5XUX0 539 aaPredicted RBP36.97■■■■□ 3.51
SDF2L1-201ENST00000248958 LMTK2Q8IWU2 1503 aa36.96■■■■□ 3.51
SDF2L1-201ENST00000248958 ARHGAP31Q2M1Z3 1444 aa36.96■■■■□ 3.51
SDF2L1-201ENST00000248958 CEP170BQ9Y4F5 1589 aaPredicted RBP36.95■■■■□ 3.51
SDF2L1-201ENST00000248958 SPATA31D1Q6ZQQ2 1576 aa36.93■■■■□ 3.5
SDF2L1-201ENST00000248958 UNC13BO14795 1591 aa36.91■■■■□ 3.5
SDF2L1-201ENST00000248958 A2ML1A8K2U0 1454 aa36.9■■■■□ 3.5
SDF2L1-201ENST00000248958 ERVK-7P63135 1459 aa36.88■■■■□ 3.5
SDF2L1-201ENST00000248958 NLRP1Q9C000 1473 aa36.88■■■■□ 3.5
SDF2L1-201ENST00000248958 CFAP65Q6ZU64 1925 aaKnown RBP36.87■■■■□ 3.49
SDF2L1-201ENST00000248958 STRCQ7RTU9 1775 aa36.86■■■■□ 3.49
SDF2L1-201ENST00000248958 DMRT2Q9Y5R5 561 aa36.83■■■■□ 3.49
SDF2L1-201ENST00000248958 EFCAB6Q5THR3 1501 aa36.81■■■■□ 3.48
SDF2L1-201ENST00000248958 GCC2Q8IWJ2 1684 aa36.8■■■■□ 3.48
SDF2L1-201ENST00000248958 PLA2R1Q13018 1463 aa36.8■■■■□ 3.48
SDF2L1-201ENST00000248958 TET3O43151 1660 aa36.79■■■■□ 3.48
SDF2L1-201ENST00000248958 IQGAP3Q86VI3 1631 aa36.76■■■■□ 3.48
SDF2L1-201ENST00000248958 NAIPQ13075 1403 aa36.76■■■■□ 3.47
SDF2L1-201ENST00000248958 RPRD2Q5VT52 1461 aaKnown RBP36.75■■■■□ 3.47
SDF2L1-201ENST00000248958 UGGT1Q9NYU2 1555 aa36.74■■■■□ 3.47
SDF2L1-201ENST00000248958 FBXO41Q8TF61 875 aa36.73■■■■□ 3.47
SDF2L1-201ENST00000248958 HFM1A2PYH4 1435 aa36.73■■■■□ 3.47
SDF2L1-201ENST00000248958 PTPRTO14522 1441 aa36.71■■■■□ 3.47
SDF2L1-201ENST00000248958 PKD2Q13563 968 aa36.71■■■■□ 3.47
SDF2L1-201ENST00000248958 THEMISQ8N1K5 641 aaPredicted RBP36.71■■■■□ 3.47
SDF2L1-201ENST00000248958 NUP155O75694 1391 aa36.7■■■■□ 3.47
SDF2L1-201ENST00000248958 NOS1P29475 1434 aa36.67■■■■□ 3.46
SDF2L1-201ENST00000248958 UBR1Q8IWV7 1749 aa36.62■■■■□ 3.45
SDF2L1-201ENST00000248958 POLR1AO95602 1720 aaPredicted RBP36.62■■■■□ 3.45
SDF2L1-201ENST00000248958 E9PCH4 1651 aa36.61■■■■□ 3.45
SDF2L1-201ENST00000248958 SYNMO15061 1565 aa36.61■■■■□ 3.45
SDF2L1-201ENST00000248958 NCKAP5LQ9HCH0 1330 aa36.6■■■■□ 3.45
SDF2L1-201ENST00000248958 KDM5AP29375 1690 aaKnown RBP36.59■■■■□ 3.45
SDF2L1-201ENST00000248958 SLC52A1Q9NWF4 448 aa36.58■■■■□ 3.45
SDF2L1-201ENST00000248958 PIK3C2BO00750 1634 aa36.57■■■■□ 3.44
SDF2L1-201ENST00000248958 ANKLE2Q86XL3 938 aa36.56■■■■□ 3.44
SDF2L1-201ENST00000248958 IDI1Q13907 227 aa36.53■■■■□ 3.44
SDF2L1-201ENST00000248958 STAG3Q9UJ98 1225 aa36.51■■■■□ 3.44
SDF2L1-201ENST00000248958 NEURL4Q96JN8 1562 aa36.48■■■■□ 3.43
SDF2L1-201ENST00000248958 ACIN1Q9UKV3 1341 aaKnown RBP36.47■■■■□ 3.43
SDF2L1-201ENST00000248958 SLIT1O75093 1534 aa36.47■■■■□ 3.43
SDF2L1-201ENST00000248958 TRIM52Q96A61 297 aa36.46■■■■□ 3.43
SDF2L1-201ENST00000248958 ADGRB3O60242 1522 aa36.45■■■■□ 3.43
SDF2L1-201ENST00000248958 MED14O60244 1454 aa36.45■■■■□ 3.43
SDF2L1-201ENST00000248958 ARHGAP23Q9P227 1491 aa36.45■■■■□ 3.43
SDF2L1-201ENST00000248958 SPHKAPQ2M3C7 1700 aa36.41■■■■□ 3.42
SDF2L1-201ENST00000248958 NPHP4O75161 1426 aaPredicted RBP36.4■■■■□ 3.42
SDF2L1-201ENST00000248958 TMEM2Q9UHN6 1383 aa36.4■■■■□ 3.42
SDF2L1-201ENST00000248958 SCAF11Q99590 1463 aaKnown RBP36.38■■■■□ 3.41
SDF2L1-201ENST00000248958 EID1Q9Y6B2 187 aa36.38■■■■□ 3.41
SDF2L1-201ENST00000248958 SETD5Q9C0A6 1442 aa36.37■■■■□ 3.41
SDF2L1-201ENST00000248958 IQGAP1P46940 1657 aa36.37■■■■□ 3.41
SDF2L1-201ENST00000248958 TXNDC2Q86VQ3 553 aa36.35■■■■□ 3.41
SDF2L1-201ENST00000248958 TMEM131LA2VDJ0 1609 aa36.34■■■■□ 3.41
SDF2L1-201ENST00000248958 CERKQ8TCT0 537 aa36.33■■■■□ 3.41
SDF2L1-201ENST00000248958 SLC4A1APQ9BWU0 796 aaKnown RBP36.33■■■■□ 3.41
SDF2L1-201ENST00000248958 MYO5BQ9ULV0 1848 aa36.31■■■■□ 3.4
SDF2L1-201ENST00000248958 LTBP4Q8N2S1 1624 aa36.31■■■■□ 3.4
SDF2L1-201ENST00000248958 LTKP29376 864 aa36.3■■■■□ 3.4
SDF2L1-201ENST00000248958 HDGFP51858 240 aaKnown RBP36.27■■■■□ 3.4
SDF2L1-201ENST00000248958 TRPM2O94759 1503 aa36.27■■■■□ 3.4
SDF2L1-201ENST00000248958 CHGAP10645 457 aaKnown RBP36.25■■■■□ 3.39
SDF2L1-201ENST00000248958 ZNF335Q9H4Z2 1342 aaPredicted RBP36.25■■■■□ 3.39
SDF2L1-201ENST00000248958 RAB3GAP2Q9H2M9 1393 aa36.21■■■■□ 3.39
SDF2L1-201ENST00000248958 IQSEC2Q5JU85 1478 aa36.19■■■■□ 3.38
SDF2L1-201ENST00000248958 ZFYVE9O95405 1425 aa36.19■■■■□ 3.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms