RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 ZNF142P52746 1687 aaPredicted RBP19.78■□□□□ 0.76
VPREB3-201ENST00000248948 NPATQ14207 1427 aa19.77■□□□□ 0.76
VPREB3-201ENST00000248948 PPP6R1Q9UPN7 881 aa19.77■□□□□ 0.76
VPREB3-201ENST00000248948 KIF15Q9NS87 1388 aa19.77■□□□□ 0.76
VPREB3-201ENST00000248948 MYO3AQ8NEV4 1616 aa19.76■□□□□ 0.75
VPREB3-201ENST00000248948 CEP152O94986 1710 aa19.74■□□□□ 0.75
VPREB3-201ENST00000248948 ANKRD30AQ9BXX3 1397 aa19.73■□□□□ 0.75
VPREB3-201ENST00000248948 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.73■□□□□ 0.75
VPREB3-201ENST00000248948 UHRF1BP1Q6BDS2 1440 aa19.73■□□□□ 0.75
VPREB3-201ENST00000248948 CAMSAP1Q5T5Y3 1602 aa19.73■□□□□ 0.75
VPREB3-201ENST00000248948 ABCC3O15438 1527 aa19.72■□□□□ 0.75
VPREB3-201ENST00000248948 KIF3BO15066 747 aa19.71■□□□□ 0.75
VPREB3-201ENST00000248948 GGT6Q6P531 493 aa19.71■□□□□ 0.75
VPREB3-201ENST00000248948 ZMYM3Q14202 1370 aa19.7■□□□□ 0.74
VPREB3-201ENST00000248948 NCOA1Q15788 1441 aa19.7■□□□□ 0.74
VPREB3-201ENST00000248948 PZPP20742 1482 aa19.7■□□□□ 0.74
VPREB3-201ENST00000248948 PTPRKQ15262 1439 aa19.69■□□□□ 0.74
VPREB3-201ENST00000248948 CEBPAP49715 358 aaPredicted RBP19.69■□□□□ 0.74
VPREB3-201ENST00000248948 PLPPR3Q6T4P5 718 aa19.69■□□□□ 0.74
VPREB3-201ENST00000248948 FAM50AQ14320 339 aaKnown RBP19.68■□□□□ 0.74
VPREB3-201ENST00000248948 RRBP1Q9P2E9 1410 aaKnown RBP19.68■□□□□ 0.74
VPREB3-201ENST00000248948 CEP170BQ9Y4F5 1589 aaPredicted RBP19.66■□□□□ 0.74
VPREB3-201ENST00000248948 VWDEQ8N2E2 1590 aa19.66■□□□□ 0.74
VPREB3-201ENST00000248948 UNC13BO14795 1591 aa19.65■□□□□ 0.74
VPREB3-201ENST00000248948 ROCK1Q13464 1354 aa19.64■□□□□ 0.73
VPREB3-201ENST00000248948 SPATA31D1Q6ZQQ2 1576 aa19.63■□□□□ 0.73
VPREB3-201ENST00000248948 STRCQ7RTU9 1775 aa19.62■□□□□ 0.73
VPREB3-201ENST00000248948 LMTK2Q8IWU2 1503 aa19.62■□□□□ 0.73
VPREB3-201ENST00000248948 WASHC2CQ9Y4E1 1318 aa19.61■□□□□ 0.73
VPREB3-201ENST00000248948 RRP7BPQ9NSQ0 103 aa19.61■□□□□ 0.73
VPREB3-201ENST00000248948 GCC2Q8IWJ2 1684 aa19.61■□□□□ 0.73
VPREB3-201ENST00000248948 ANKRD50Q9ULJ7 1429 aa19.59■□□□□ 0.73
VPREB3-201ENST00000248948 EFCAB6Q5THR3 1501 aa19.59■□□□□ 0.73
VPREB3-201ENST00000248948 PPARGC1BQ86YN6 1023 aaKnown RBP19.58■□□□□ 0.72
VPREB3-201ENST00000248948 CHIC2Q9UKJ5 165 aa19.58■□□□□ 0.72
VPREB3-201ENST00000248948 ARHGAP31Q2M1Z3 1444 aa19.58■□□□□ 0.72
VPREB3-201ENST00000248948 TET3O43151 1660 aa19.57■□□□□ 0.72
VPREB3-201ENST00000248948 A2ML1A8K2U0 1454 aa19.57■□□□□ 0.72
VPREB3-201ENST00000248948 ERVK-7P63135 1459 aa19.57■□□□□ 0.72
VPREB3-201ENST00000248948 NLRP1Q9C000 1473 aa19.57■□□□□ 0.72
VPREB3-201ENST00000248948 KANK1Q14678 1352 aa19.57■□□□□ 0.72
VPREB3-201ENST00000248948 POLR1AO95602 1720 aaPredicted RBP19.56■□□□□ 0.72
VPREB3-201ENST00000248948 PLA2R1Q13018 1463 aa19.55■□□□□ 0.72
VPREB3-201ENST00000248948 IQGAP3Q86VI3 1631 aa19.55■□□□□ 0.72
VPREB3-201ENST00000248948 HSPA2P54652 639 aa19.55■□□□□ 0.72
VPREB3-201ENST00000248948 TNRQ92752 1358 aa19.55■□□□□ 0.72
VPREB3-201ENST00000248948 CFAP65Q6ZU64 1925 aaKnown RBP19.52■□□□□ 0.72
VPREB3-201ENST00000248948 KDM5AP29375 1690 aaKnown RBP19.52■□□□□ 0.71
VPREB3-201ENST00000248948 RPRD2Q5VT52 1461 aaKnown RBP19.5■□□□□ 0.71
VPREB3-201ENST00000248948 UBR1Q8IWV7 1749 aa19.5■□□□□ 0.71
VPREB3-201ENST00000248948 UGGT1Q9NYU2 1555 aa19.49■□□□□ 0.71
VPREB3-201ENST00000248948 SYNMO15061 1565 aa19.46■□□□□ 0.71
VPREB3-201ENST00000248948 PTPRTO14522 1441 aa19.46■□□□□ 0.71
VPREB3-201ENST00000248948 FBXO31Q5XUX0 539 aaPredicted RBP19.46■□□□□ 0.71
VPREB3-201ENST00000248948 E9PCH4 1651 aa19.46■□□□□ 0.71
VPREB3-201ENST00000248948 PIK3C2BO00750 1634 aa19.44■□□□□ 0.7
VPREB3-201ENST00000248948 HFM1A2PYH4 1435 aa19.43■□□□□ 0.7
VPREB3-201ENST00000248948 ITGAEP38570 1179 aa19.43■□□□□ 0.7
VPREB3-201ENST00000248948 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.43■□□□□ 0.7
VPREB3-201ENST00000248948 NEURL4Q96JN8 1562 aa19.43■□□□□ 0.7
VPREB3-201ENST00000248948 NAIPQ13075 1403 aa19.42■□□□□ 0.7
VPREB3-201ENST00000248948 NOS1P29475 1434 aa19.42■□□□□ 0.7
VPREB3-201ENST00000248948 DMRT2Q9Y5R5 561 aa19.41■□□□□ 0.7
VPREB3-201ENST00000248948 ADGRB3O60242 1522 aa19.39■□□□□ 0.69
VPREB3-201ENST00000248948 SPHKAPQ2M3C7 1700 aa19.39■□□□□ 0.69
VPREB3-201ENST00000248948 IQGAP1P46940 1657 aa19.37■□□□□ 0.69
VPREB3-201ENST00000248948 SLIT1O75093 1534 aa19.37■□□□□ 0.69
VPREB3-201ENST00000248948 PKD2Q13563 968 aa19.37■□□□□ 0.69
VPREB3-201ENST00000248948 MED14O60244 1454 aa19.35■□□□□ 0.69
VPREB3-201ENST00000248948 ARHGAP23Q9P227 1491 aa19.35■□□□□ 0.69
VPREB3-201ENST00000248948 MYO5BQ9ULV0 1848 aa19.34■□□□□ 0.69
VPREB3-201ENST00000248948 NUP155O75694 1391 aa19.33■□□□□ 0.69
VPREB3-201ENST00000248948 THEMISQ8N1K5 641 aaPredicted RBP19.33■□□□□ 0.68
VPREB3-201ENST00000248948 LTBP4Q8N2S1 1624 aa19.31■□□□□ 0.68
VPREB3-201ENST00000248948 TMEM131LA2VDJ0 1609 aa19.3■□□□□ 0.68
VPREB3-201ENST00000248948 SCAF11Q99590 1463 aaKnown RBP19.29■□□□□ 0.68
VPREB3-201ENST00000248948 NCKAP5LQ9HCH0 1330 aa19.29■□□□□ 0.68
VPREB3-201ENST00000248948 TRPM2O94759 1503 aa19.27■□□□□ 0.68
VPREB3-201ENST00000248948 IQSEC2Q5JU85 1478 aa19.27■□□□□ 0.67
VPREB3-201ENST00000248948 NPHP4O75161 1426 aaPredicted RBP19.26■□□□□ 0.67
VPREB3-201ENST00000248948 SLC52A1Q9NWF4 448 aa19.26■□□□□ 0.67
VPREB3-201ENST00000248948 ANKLE2Q86XL3 938 aa19.25■□□□□ 0.67
VPREB3-201ENST00000248948 TMEM2Q9UHN6 1383 aa19.24■□□□□ 0.67
VPREB3-201ENST00000248948 CLTCL1P53675 1640 aa19.22■□□□□ 0.67
VPREB3-201ENST00000248948 CPS1P31327 1500 aa19.22■□□□□ 0.67
VPREB3-201ENST00000248948 IDI1Q13907 227 aa19.22■□□□□ 0.67
VPREB3-201ENST00000248948 KIF1BO60333 1816 aa19.22■□□□□ 0.67
VPREB3-201ENST00000248948 ZFYVE9O95405 1425 aa19.19■□□□□ 0.66
VPREB3-201ENST00000248948 STAG3Q9UJ98 1225 aa19.19■□□□□ 0.66
VPREB3-201ENST00000248948 ACIN1Q9UKV3 1341 aaKnown RBP19.18■□□□□ 0.66
VPREB3-201ENST00000248948 STRCP1A6NGW2 1772 aa19.17■□□□□ 0.66
VPREB3-201ENST00000248948 CERKQ8TCT0 537 aa19.17■□□□□ 0.66
VPREB3-201ENST00000248948 EID1Q9Y6B2 187 aa19.16■□□□□ 0.66
VPREB3-201ENST00000248948 ZNF335Q9H4Z2 1342 aaPredicted RBP19.16■□□□□ 0.66
VPREB3-201ENST00000248948 SETD5Q9C0A6 1442 aa19.15■□□□□ 0.66
VPREB3-201ENST00000248948 FBXO41Q8TF61 875 aa19.14■□□□□ 0.65
VPREB3-201ENST00000248948 DIP2AQ14689 1571 aa19.14■□□□□ 0.65
VPREB3-201ENST00000248948 RIMS2Q9UQ26 1411 aa19.13■□□□□ 0.65
VPREB3-201ENST00000248948 NWD1Q149M9 1564 aa19.13■□□□□ 0.65
VPREB3-201ENST00000248948 LTKP29376 864 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms