RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 UNC13BO14795 1591 aa26.98■■□□□ 1.91
TNFSF9-201ENST00000245817 FAM135AQ9P2D6 1515 aa26.96■■□□□ 1.91
TNFSF9-201ENST00000245817 FRMPD1Q5SYB0 1578 aa26.96■■□□□ 1.91
TNFSF9-201ENST00000245817 KIDINS220Q9ULH0 1771 aa26.95■■□□□ 1.9
TNFSF9-201ENST00000245817 HECW2Q9P2P5 1572 aa26.95■■□□□ 1.9
TNFSF9-201ENST00000245817 KIF3BO15066 747 aa26.94■■□□□ 1.9
TNFSF9-201ENST00000245817 A2MP01023 1474 aa26.91■■□□□ 1.9
TNFSF9-201ENST00000245817 PPP1R15AO75807 674 aaPredicted RBP26.91■■□□□ 1.9
TNFSF9-201ENST00000245817 KANK1Q14678 1352 aa26.91■■□□□ 1.9
TNFSF9-201ENST00000245817 ZMYM4Q5VZL5 1548 aa26.9■■□□□ 1.9
TNFSF9-201ENST00000245817 MAGI2Q86UL8 1455 aa26.9■■□□□ 1.9
TNFSF9-201ENST00000245817 IQGAP3Q86VI3 1631 aa26.88■■□□□ 1.89
TNFSF9-201ENST00000245817 ZNF316A6NFI3 1004 aaPredicted RBP26.88■■□□□ 1.89
TNFSF9-201ENST00000245817 RPRD2Q5VT52 1461 aaKnown RBP26.87■■□□□ 1.89
TNFSF9-201ENST00000245817 EIF2AK4Q9P2K8 1649 aaKnown RBP26.87■■□□□ 1.89
TNFSF9-201ENST00000245817 YEATS2Q9ULM3 1422 aa26.81■■□□□ 1.88
TNFSF9-201ENST00000245817 DEPDC5O75140 1603 aa26.8■■□□□ 1.88
TNFSF9-201ENST00000245817 ABCA6Q8N139 1617 aa26.79■■□□□ 1.88
TNFSF9-201ENST00000245817 L3MBTL2Q969R5 705 aa26.79■■□□□ 1.88
TNFSF9-201ENST00000245817 ATP10AO60312 1499 aa26.76■■□□□ 1.87
TNFSF9-201ENST00000245817 DIP2CQ9Y2E4 1556 aa26.76■■□□□ 1.87
TNFSF9-201ENST00000245817 GGT6Q6P531 493 aa26.75■■□□□ 1.87
TNFSF9-201ENST00000245817 PRDM15P57071 1507 aaPredicted RBP26.75■■□□□ 1.87
TNFSF9-201ENST00000245817 ARHGEF40Q8TER5 1519 aa26.75■■□□□ 1.87
TNFSF9-201ENST00000245817 CCDC144AA2RUR9 1427 aa26.74■■□□□ 1.87
TNFSF9-201ENST00000245817 VWDEQ8N2E2 1590 aa26.71■■□□□ 1.87
TNFSF9-201ENST00000245817 RNF17Q9BXT8 1623 aaKnown RBP26.7■■□□□ 1.86
TNFSF9-201ENST00000245817 TET3O43151 1660 aa26.68■■□□□ 1.86
TNFSF9-201ENST00000245817 MROH1Q8NDA8 1641 aa26.68■■□□□ 1.86
TNFSF9-201ENST00000245817 BCORL1Q5H9F3 1711 aa26.66■■□□□ 1.86
TNFSF9-201ENST00000245817 ARID4BQ4LE39 1312 aaPredicted RBP26.66■■□□□ 1.86
TNFSF9-201ENST00000245817 WASHC2CQ9Y4E1 1318 aa26.66■■□□□ 1.86
TNFSF9-201ENST00000245817 PLA2R1Q13018 1463 aa26.65■■□□□ 1.86
TNFSF9-201ENST00000245817 REREQ9P2R6 1566 aa26.64■■□□□ 1.85
TNFSF9-201ENST00000245817 E9PCH4 1651 aa26.63■■□□□ 1.85
TNFSF9-201ENST00000245817 LMTK2Q8IWU2 1503 aa26.63■■□□□ 1.85
TNFSF9-201ENST00000245817 PTPRTO14522 1441 aa26.59■■□□□ 1.85
TNFSF9-201ENST00000245817 DIEXFQ68CQ4 756 aaKnown RBP26.58■■□□□ 1.85
TNFSF9-201ENST00000245817 EFCAB6Q5THR3 1501 aa26.58■■□□□ 1.84
TNFSF9-201ENST00000245817 AGLP35573 1532 aa26.57■■□□□ 1.84
TNFSF9-201ENST00000245817 DCAF11Q8TEB1 546 aa26.57■■□□□ 1.84
TNFSF9-201ENST00000245817 RGL3Q3MIN7 710 aa26.56■■□□□ 1.84
TNFSF9-201ENST00000245817 TRPM2O94759 1503 aa26.56■■□□□ 1.84
TNFSF9-201ENST00000245817 SIGLEC1Q9BZZ2 1709 aa26.56■■□□□ 1.84
TNFSF9-201ENST00000245817 MLECQ14165 292 aa26.54■■□□□ 1.84
TNFSF9-201ENST00000245817 ZNF326Q5BKZ1 582 aaKnown RBP26.54■■□□□ 1.84
TNFSF9-201ENST00000245817 CEP152O94986 1710 aa26.54■■□□□ 1.84
TNFSF9-201ENST00000245817 ABCC3O15438 1527 aa26.54■■□□□ 1.84
TNFSF9-201ENST00000245817 NBPF8Q3BBV2 869 aa26.54■■□□□ 1.84
TNFSF9-201ENST00000245817 KDM2AQ9Y2K7 1162 aa26.54■■□□□ 1.84
TNFSF9-201ENST00000245817 SPHKAPQ2M3C7 1700 aa26.53■■□□□ 1.84
TNFSF9-201ENST00000245817 PPP6R1Q9UPN7 881 aa26.53■■□□□ 1.84
TNFSF9-201ENST00000245817 NPATQ14207 1427 aa26.48■■□□□ 1.83
TNFSF9-201ENST00000245817 ZC3H13Q5T200 1668 aaKnown RBP26.47■■□□□ 1.83
TNFSF9-201ENST00000245817 EIF4G2P78344 907 aaKnown RBP eCLIP26.47■■□□□ 1.835e-7■■■■□ 20.8
TNFSF9-201ENST00000245817 UHRF1BP1Q6BDS2 1440 aa26.47■■□□□ 1.83
TNFSF9-201ENST00000245817 CAMSAP1Q5T5Y3 1602 aa26.44■■□□□ 1.82
TNFSF9-201ENST00000245817 ARHGAP31Q2M1Z3 1444 aa26.43■■□□□ 1.82
TNFSF9-201ENST00000245817 ESF1Q9H501 851 aaKnown RBP26.43■■□□□ 1.82
TNFSF9-201ENST00000245817 CLTCL1P53675 1640 aa26.43■■□□□ 1.82
TNFSF9-201ENST00000245817 CNTLNQ9NXG0 1405 aa26.43■■□□□ 1.82
TNFSF9-201ENST00000245817 HIRIP3Q9BW71 556 aaPredicted RBP26.42■■□□□ 1.82
TNFSF9-201ENST00000245817 SPATA31E1Q6ZUB1 1445 aa26.42■■□□□ 1.82
TNFSF9-201ENST00000245817 STAC3Q96MF2 364 aa26.41■■□□□ 1.82
TNFSF9-201ENST00000245817 HSPA5P11021 654 aaKnown RBP26.39■■□□□ 1.82
TNFSF9-201ENST00000245817 CHGAP10645 457 aaKnown RBP26.36■■□□□ 1.81
TNFSF9-201ENST00000245817 RALGAPBQ86X10 1494 aa26.35■■□□□ 1.81
TNFSF9-201ENST00000245817 NOS1P29475 1434 aa26.35■■□□□ 1.81
TNFSF9-201ENST00000245817 PRAG1Q86YV5 1406 aa26.35■■□□□ 1.81
TNFSF9-201ENST00000245817 NEURL4Q96JN8 1562 aa26.34■■□□□ 1.81
TNFSF9-201ENST00000245817 CARD11Q9BXL7 1154 aa26.34■■□□□ 1.81
TNFSF9-201ENST00000245817 UGGT1Q9NYU2 1555 aa26.34■■□□□ 1.81
TNFSF9-201ENST00000245817 ADAMTSL3P82987 1691 aa26.33■■□□□ 1.81
TNFSF9-201ENST00000245817 FER1L4A9Z1Z3 1794 aa26.32■■□□□ 1.8
TNFSF9-201ENST00000245817 SLC52A1Q9NWF4 448 aa26.31■■□□□ 1.8
TNFSF9-201ENST00000245817 ROCK2O75116 1388 aaKnown RBP26.31■■□□□ 1.8
TNFSF9-201ENST00000245817 KIF1BO60333 1816 aa26.31■■□□□ 1.8
TNFSF9-201ENST00000245817 KDM4FA0A1W2PPD8 638 aa26.31■■□□□ 1.8
TNFSF9-201ENST00000245817 CFAP65Q6ZU64 1925 aaKnown RBP26.3■■□□□ 1.8
TNFSF9-201ENST00000245817 MADDQ8WXG6 1647 aa26.29■■□□□ 1.8
TNFSF9-201ENST00000245817 CLTCQ00610 1675 aaKnown RBP26.28■■□□□ 1.8
TNFSF9-201ENST00000245817 USP47Q96K76 1375 aa26.26■■□□□ 1.79
TNFSF9-201ENST00000245817 ZMYM3Q14202 1370 aa26.26■■□□□ 1.79
TNFSF9-201ENST00000245817 FBXO31Q5XUX0 539 aaPredicted RBP26.25■■□□□ 1.79
TNFSF9-201ENST00000245817 RIMS1Q86UR5 1692 aaKnown RBP26.24■■□□□ 1.79
TNFSF9-201ENST00000245817 RPGRIP1LQ68CZ1 1315 aa26.24■■□□□ 1.79
TNFSF9-201ENST00000245817 SYNMO15061 1565 aa26.23■■□□□ 1.79
TNFSF9-201ENST00000245817 IDI1Q13907 227 aa26.23■■□□□ 1.79
TNFSF9-201ENST00000245817 ADGRB3O60242 1522 aa26.23■■□□□ 1.79
TNFSF9-201ENST00000245817 DDX10Q13206 875 aaKnown RBP26.22■■□□□ 1.79
TNFSF9-201ENST00000245817 ERVK-7P63135 1459 aa26.22■■□□□ 1.79
TNFSF9-201ENST00000245817 PREX1Q8TCU6 1659 aa26.22■■□□□ 1.79
TNFSF9-201ENST00000245817 TRPM1Q7Z4N2 1603 aa26.21■■□□□ 1.79
TNFSF9-201ENST00000245817 PLPPR3Q6T4P5 718 aa26.21■■□□□ 1.79
TNFSF9-201ENST00000245817 MROH2AA6NES4 1674 aa26.21■■□□□ 1.79
TNFSF9-201ENST00000245817 PIK3C2BO00750 1634 aa26.2■■□□□ 1.78
TNFSF9-201ENST00000245817 CEBPAP49715 358 aaPredicted RBP26.19■■□□□ 1.78
TNFSF9-201ENST00000245817 NBPF1Q3BBV0 1214 aa26.19■■□□□ 1.78
TNFSF9-201ENST00000245817 MYOM2P54296 1465 aa26.18■■□□□ 1.78
TNFSF9-201ENST00000245817 GPRASP1Q5JY77 1395 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms