RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 ATP10AO60312 1499 aa24.71■■□□□ 1.55
CDKN1A-201ENST00000244741 ARHGEF40Q8TER5 1519 aa24.68■■□□□ 1.54
CDKN1A-201ENST00000244741 FOXD1Q16676 465 aa24.68■■□□□ 1.54
CDKN1A-201ENST00000244741 MLECQ14165 292 aa24.67■■□□□ 1.54
CDKN1A-201ENST00000244741 MPHOSPH9Q99550 1183 aa24.67■■□□□ 1.54
CDKN1A-201ENST00000244741 SLC4A1APQ9BWU0 796 aaKnown RBP24.67■■□□□ 1.54
CDKN1A-201ENST00000244741 SIGLEC1Q9BZZ2 1709 aa24.66■■□□□ 1.54
CDKN1A-201ENST00000244741 ARID4BQ4LE39 1312 aaPredicted RBP24.65■■□□□ 1.54
CDKN1A-201ENST00000244741 PZPP20742 1482 aa24.62■■□□□ 1.53
CDKN1A-201ENST00000244741 SCAF1Q9H7N4 1312 aaKnown RBP24.61■■□□□ 1.53
CDKN1A-201ENST00000244741 EIF2AK4Q9P2K8 1649 aaKnown RBP24.6■■□□□ 1.53
CDKN1A-201ENST00000244741 UNC13BO14795 1591 aa24.6■■□□□ 1.53
CDKN1A-201ENST00000244741 CLSPNQ9HAW4 1339 aa24.6■■□□□ 1.53
CDKN1A-201ENST00000244741 PKD2Q13563 968 aa24.59■■□□□ 1.53
CDKN1A-201ENST00000244741 FAM135AQ9P2D6 1515 aa24.57■■□□□ 1.52
CDKN1A-201ENST00000244741 MROH1Q8NDA8 1641 aa24.57■■□□□ 1.52
CDKN1A-201ENST00000244741 DEPDC5O75140 1603 aa24.56■■□□□ 1.52
CDKN1A-201ENST00000244741 KANK1Q14678 1352 aa24.55■■□□□ 1.52
CDKN1A-201ENST00000244741 WASHC2CQ9Y4E1 1318 aa24.54■■□□□ 1.52
CDKN1A-201ENST00000244741 REREQ9P2R6 1566 aa24.54■■□□□ 1.52
CDKN1A-201ENST00000244741 KDM5DQ9BY66 1539 aa24.53■■□□□ 1.52
CDKN1A-201ENST00000244741 RNF17Q9BXT8 1623 aaKnown RBP24.53■■□□□ 1.52
CDKN1A-201ENST00000244741 PRDM15P57071 1507 aaPredicted RBP24.53■■□□□ 1.52
CDKN1A-201ENST00000244741 ACIN1Q9UKV3 1341 aaKnown RBP24.52■■□□□ 1.52
CDKN1A-201ENST00000244741 IQGAP3Q86VI3 1631 aa24.51■■□□□ 1.51
CDKN1A-201ENST00000244741 SIN3AQ96ST3 1273 aa24.51■■□□□ 1.51
CDKN1A-201ENST00000244741 AGLP35573 1532 aa24.51■■□□□ 1.51
CDKN1A-201ENST00000244741 BCORL1Q5H9F3 1711 aa24.5■■□□□ 1.51
CDKN1A-201ENST00000244741 NEUROD1Q13562 356 aa24.49■■□□□ 1.51
CDKN1A-201ENST00000244741 CEP152O94986 1710 aa24.48■■□□□ 1.51
CDKN1A-201ENST00000244741 VWDEQ8N2E2 1590 aa24.47■■□□□ 1.51
CDKN1A-201ENST00000244741 ABCC3O15438 1527 aa24.44■■□□□ 1.5
CDKN1A-201ENST00000244741 CFAP65Q6ZU64 1925 aaKnown RBP24.42■■□□□ 1.5
CDKN1A-201ENST00000244741 ESF1Q9H501 851 aaKnown RBP24.41■■□□□ 1.5
CDKN1A-201ENST00000244741 ANKRD30BQ9BXX2 1392 aa24.41■■□□□ 1.5
CDKN1A-201ENST00000244741 E9PCH4 1651 aa24.4■■□□□ 1.5
CDKN1A-201ENST00000244741 PLPPR3Q6T4P5 718 aa24.4■■□□□ 1.5
CDKN1A-201ENST00000244741 TET3O43151 1660 aa24.39■■□□□ 1.5
CDKN1A-201ENST00000244741 CENPBP07199 599 aaPredicted RBP24.38■■□□□ 1.49
CDKN1A-201ENST00000244741 CLTCQ00610 1675 aaKnown RBP24.38■■□□□ 1.49
CDKN1A-201ENST00000244741 MIER1Q8N108 512 aa24.37■■□□□ 1.49
CDKN1A-201ENST00000244741 EFCAB6Q5THR3 1501 aa24.36■■□□□ 1.49
CDKN1A-201ENST00000244741 LMTK2Q8IWU2 1503 aa24.36■■□□□ 1.49
CDKN1A-201ENST00000244741 NPATQ14207 1427 aa24.36■■□□□ 1.49
CDKN1A-201ENST00000244741 CAMSAP1Q5T5Y3 1602 aa24.35■■□□□ 1.49
CDKN1A-201ENST00000244741 FBXO31Q5XUX0 539 aaPredicted RBP24.35■■□□□ 1.49
CDKN1A-201ENST00000244741 PLA2R1Q13018 1463 aa24.34■■□□□ 1.49
CDKN1A-201ENST00000244741 PPP6R1Q9UPN7 881 aa24.34■■□□□ 1.49
CDKN1A-201ENST00000244741 ZC3H13Q5T200 1668 aaKnown RBP24.31■■□□□ 1.48
CDKN1A-201ENST00000244741 CEBPAP49715 358 aaPredicted RBP24.31■■□□□ 1.48
CDKN1A-201ENST00000244741 ZMYM3Q14202 1370 aa24.3■■□□□ 1.48
CDKN1A-201ENST00000244741 UGGT1Q9NYU2 1555 aa24.27■■□□□ 1.48
CDKN1A-201ENST00000244741 CCDC144AA2RUR9 1427 aa24.26■■□□□ 1.47
CDKN1A-201ENST00000244741 FER1L4A9Z1Z3 1794 aa24.26■■□□□ 1.47
CDKN1A-201ENST00000244741 SPHKAPQ2M3C7 1700 aa24.25■■□□□ 1.47
CDKN1A-201ENST00000244741 PTPRTO14522 1441 aa24.24■■□□□ 1.47
CDKN1A-201ENST00000244741 MADDQ8WXG6 1647 aa24.24■■□□□ 1.47
CDKN1A-201ENST00000244741 ARHGAP31Q2M1Z3 1444 aa24.24■■□□□ 1.47
CDKN1A-201ENST00000244741 RPRD2Q5VT52 1461 aaKnown RBP24.24■■□□□ 1.47
CDKN1A-201ENST00000244741 RGL3Q3MIN7 710 aa24.22■■□□□ 1.47
CDKN1A-201ENST00000244741 TRPM2O94759 1503 aa24.21■■□□□ 1.47
CDKN1A-201ENST00000244741 CNTLNQ9NXG0 1405 aa24.21■■□□□ 1.47
CDKN1A-201ENST00000244741 TONSLQ96HA7 1378 aa24.21■■□□□ 1.47
CDKN1A-201ENST00000244741 YTHDC1Q96MU7 727 aaKnown RBP24.2■■□□□ 1.47
CDKN1A-201ENST00000244741 CHGAP10645 457 aaKnown RBP24.2■■□□□ 1.46
CDKN1A-201ENST00000244741 RIMS1Q86UR5 1692 aaKnown RBP24.19■■□□□ 1.46
CDKN1A-201ENST00000244741 CLTCL1P53675 1640 aa24.19■■□□□ 1.46
CDKN1A-201ENST00000244741 PREX1Q8TCU6 1659 aa24.19■■□□□ 1.46
CDKN1A-201ENST00000244741 NOS1P29475 1434 aa24.18■■□□□ 1.46
CDKN1A-201ENST00000244741 ERVK-7P63135 1459 aa24.18■■□□□ 1.46
CDKN1A-201ENST00000244741 GTF3C3Q9Y5Q9 886 aa24.18■■□□□ 1.46
CDKN1A-201ENST00000244741 SYNMO15061 1565 aa24.17■■□□□ 1.46
CDKN1A-201ENST00000244741 ADAMTSL3P82987 1691 aa24.17■■□□□ 1.46
CDKN1A-201ENST00000244741 L3MBTL2Q969R5 705 aa24.17■■□□□ 1.46
CDKN1A-201ENST00000244741 IDI1Q13907 227 aa24.16■■□□□ 1.46
CDKN1A-201ENST00000244741 C3P01024 1663 aa24.14■■□□□ 1.46
CDKN1A-201ENST00000244741 MROH2AA6NES4 1674 aa24.13■■□□□ 1.45
CDKN1A-201ENST00000244741 KDM2AQ9Y2K7 1162 aa24.12■■□□□ 1.45
CDKN1A-201ENST00000244741 SPATA31D1Q6ZQQ2 1576 aa24.1■■□□□ 1.45
CDKN1A-201ENST00000244741 DCAF11Q8TEB1 546 aa24.09■■□□□ 1.45
CDKN1A-201ENST00000244741 TNRQ92752 1358 aa24.09■■□□□ 1.45
CDKN1A-201ENST00000244741 KDM4FA0A1W2PPD8 638 aa24.08■■□□□ 1.45
CDKN1A-201ENST00000244741 ZNF326Q5BKZ1 582 aaKnown RBP24.08■■□□□ 1.45
CDKN1A-201ENST00000244741 SLC52A1Q9NWF4 448 aa24.08■■□□□ 1.45
CDKN1A-201ENST00000244741 SPATA31E1Q6ZUB1 1445 aa24.06■■□□□ 1.44
CDKN1A-201ENST00000244741 STAG3Q9UJ98 1225 aa24.06■■□□□ 1.44
CDKN1A-201ENST00000244741 PIK3C2BO00750 1634 aa24.05■■□□□ 1.44
CDKN1A-201ENST00000244741 PPP1R15AO75807 674 aaPredicted RBP24.05■■□□□ 1.44
CDKN1A-201ENST00000244741 NUTM2DQ5VT03 806 aaPredicted RBP24.05■■□□□ 1.44
CDKN1A-201ENST00000244741 TIMELESSQ9UNS1 1208 aa24.05■■□□□ 1.44
CDKN1A-201ENST00000244741 PTPRMP28827 1452 aa24.04■■□□□ 1.44
CDKN1A-201ENST00000244741 SENP3Q9H4L4 574 aaPredicted RBP24.04■■□□□ 1.44
CDKN1A-201ENST00000244741 KIF1BO60333 1816 aa24.04■■□□□ 1.44
CDKN1A-201ENST00000244741 MYO5BQ9ULV0 1848 aa23.99■■□□□ 1.43
CDKN1A-201ENST00000244741 NBPF8Q3BBV2 869 aa23.99■■□□□ 1.43
CDKN1A-201ENST00000244741 ADGRB3O60242 1522 aa23.98■■□□□ 1.43
CDKN1A-201ENST00000244741 TMEM131LA2VDJ0 1609 aa23.96■■□□□ 1.43
CDKN1A-201ENST00000244741 A2ML1A8K2U0 1454 aa23.93■■□□□ 1.42
CDKN1A-201ENST00000244741 ADGRF5Q8IZF2 1346 aa23.92■■□□□ 1.42
CDKN1A-201ENST00000244741 NLRP1Q9C000 1473 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms