RNA–Protein interactions for RNA: ENST00000243077.7

LRP1-201, Transcript of LDL receptor related protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP1, Length 14,897 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-201ENST00000243077 SF3A1Q15459 793 aaKnown RBP11.1□□□□□ -0.63
LRP1-201ENST00000243077 NOM1Q5C9Z4 860 aaKnown RBP11.1□□□□□ -0.63
LRP1-201ENST00000243077 IPO7O95373 1038 aaKnown RBP11.09□□□□□ -0.63
LRP1-201ENST00000243077 MYBBP1AQ9BQG0 1328 aaKnown RBP11.08□□□□□ -0.63
LRP1-201ENST00000243077 RNF20Q5VTR2 975 aa11.08□□□□□ -0.64
LRP1-201ENST00000243077 GORABQ5T7V8 394 aa11.08□□□□□ -0.64
LRP1-201ENST00000243077 DIAPH3Q9NSV4 1193 aa11.07□□□□□ -0.64
LRP1-201ENST00000243077 H3BQV1 296 aa11.07□□□□□ -0.64
LRP1-201ENST00000243077 MCM2P49736 904 aa11.07□□□□□ -0.64
LRP1-201ENST00000243077 IFFO2Q5TF58 517 aa11.07□□□□□ -0.64
LRP1-201ENST00000243077 CCDC47Q96A33 483 aaKnown RBP11.07□□□□□ -0.64
LRP1-201ENST00000243077 ROCK1Q13464 1354 aa11.07□□□□□ -0.64
LRP1-201ENST00000243077 BECN2A8MW95 431 aa11.06□□□□□ -0.64
LRP1-201ENST00000243077 ZKSCAN1P17029 563 aaPredicted RBP11.06□□□□□ -0.64
LRP1-201ENST00000243077 CHMP5Q9NZZ3 219 aa11.06□□□□□ -0.64
LRP1-201ENST00000243077 HSP90AB4PQ58FF6 505 aa11.06□□□□□ -0.64
LRP1-201ENST00000243077 TSHZ2Q9NRE2 1034 aa11.06□□□□□ -0.64
LRP1-201ENST00000243077 CCP110O43303 1012 aa11.06□□□□□ -0.64
LRP1-201ENST00000243077 ZKSCAN2Q63HK3 967 aa11.06□□□□□ -0.64
LRP1-201ENST00000243077 AKAP17AQ02040 695 aaKnown RBP11.06□□□□□ -0.64
LRP1-201ENST00000243077 RTN4Q9NQC3 1192 aaKnown RBP11.06□□□□□ -0.64
LRP1-201ENST00000243077 TRIM6-TRIM34B2RNG4 842 aa11.05□□□□□ -0.64
LRP1-201ENST00000243077 NAT10Q9H0A0 1025 aaKnown RBP11.05□□□□□ -0.64
LRP1-201ENST00000243077 TAF7LQ5H9L4 462 aa11.05□□□□□ -0.64
LRP1-201ENST00000243077 ARGLU1Q9NWB6 273 aaPredicted RBP11.05□□□□□ -0.64
LRP1-201ENST00000243077 FAM184AQ8NB25 1140 aa11.05□□□□□ -0.64
LRP1-201ENST00000243077 NUP155O75694 1391 aa11.05□□□□□ -0.64
LRP1-201ENST00000243077 SYNE3Q6ZMZ3 975 aa11.04□□□□□ -0.64
LRP1-201ENST00000243077 IL27Q8NEV9 243 aa11.04□□□□□ -0.64
LRP1-201ENST00000243077 DDX19BQ9UMR2 479 aa11.04□□□□□ -0.64
LRP1-201ENST00000243077 RAB3GAP2Q9H2M9 1393 aa11.04□□□□□ -0.64
LRP1-201ENST00000243077 WASHC2AQ641Q2 1341 aa11.04□□□□□ -0.64
LRP1-201ENST00000243077 WASHC2CQ9Y4E1 1318 aa11.04□□□□□ -0.64
LRP1-201ENST00000243077 GZF1Q9H116 711 aaPredicted RBP11.04□□□□□ -0.64
LRP1-201ENST00000243077 PLPPR3Q6T4P5 718 aa11.04□□□□□ -0.64
LRP1-201ENST00000243077 HMGN5P82970 282 aaKnown RBP11.03□□□□□ -0.64
LRP1-201ENST00000243077 EID1Q9Y6B2 187 aa11.03□□□□□ -0.64
LRP1-201ENST00000243077 CWC15Q9P013 229 aaKnown RBP11.03□□□□□ -0.64
LRP1-201ENST00000243077 SLKQ9H2G2 1235 aaPredicted RBP11.03□□□□□ -0.64
LRP1-201ENST00000243077 ERCC4Q92889 916 aaPredicted RBP11.03□□□□□ -0.64
LRP1-201ENST00000243077 LMOD2Q6P5Q4 547 aa11.03□□□□□ -0.64
LRP1-201ENST00000243077 MFAP1P55081 439 aaKnown RBP11.03□□□□□ -0.64
LRP1-201ENST00000243077 TPRNQ4KMQ1 711 aa11.03□□□□□ -0.64
LRP1-201ENST00000243077 DDX49Q9Y6V7 483 aaKnown RBP11.03□□□□□ -0.64
LRP1-201ENST00000243077 TPD52L1Q16890 204 aaPredicted RBP11.02□□□□□ -0.64
LRP1-201ENST00000243077 AK7Q96M32 723 aa11.02□□□□□ -0.65
LRP1-201ENST00000243077 HSP90B1P14625 803 aaKnown RBP11.02□□□□□ -0.65
LRP1-201ENST00000243077 PDE4AP27815 886 aa11.02□□□□□ -0.65
LRP1-201ENST00000243077 FAM43AQ8N2R8 423 aa11.02□□□□□ -0.65
LRP1-201ENST00000243077 TULP1O00294 542 aaPredicted RBP11.02□□□□□ -0.65
LRP1-201ENST00000243077 API5Q9BZZ5 524 aaKnown RBP11.02□□□□□ -0.65
LRP1-201ENST00000243077 MYO6Q9UM54 1294 aa11.02□□□□□ -0.65
LRP1-201ENST00000243077 CAVIN1Q6NZI2 390 aaKnown RBP11.01□□□□□ -0.65
LRP1-201ENST00000243077 AEBP2Q6ZN18 517 aaPredicted RBP11.01□□□□□ -0.65
LRP1-201ENST00000243077 MRE11P49959 708 aa11.01□□□□□ -0.65
LRP1-201ENST00000243077 PDS5BQ9NTI5 1447 aa11.01□□□□□ -0.65
LRP1-201ENST00000243077 VGFO15240 615 aaPredicted RBP11□□□□□ -0.65
LRP1-201ENST00000243077 RASSF8Q8NHQ8 419 aa11□□□□□ -0.65
LRP1-201ENST00000243077 TRIM29Q14134 588 aa10.99□□□□□ -0.65
LRP1-201ENST00000243077 CT47B1P0C2W7 299 aaPredicted RBP10.99□□□□□ -0.65
LRP1-201ENST00000243077 KIF7Q2M1P5 1343 aa10.99□□□□□ -0.65
LRP1-201ENST00000243077 SPRYD3Q8NCJ5 442 aa10.99□□□□□ -0.65
LRP1-201ENST00000243077 RDXP35241 583 aaKnown RBP10.99□□□□□ -0.65
LRP1-201ENST00000243077 PDCP20941 246 aa10.99□□□□□ -0.65
LRP1-201ENST00000243077 INTS3Q68E01 1043 aaKnown RBP10.99□□□□□ -0.65
LRP1-201ENST00000243077 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.99□□□□□ -0.65
LRP1-201ENST00000243077 CCDC18Q5T9S5 1454 aa10.99□□□□□ -0.65
LRP1-201ENST00000243077 EVC2Q86UK5 1308 aa10.99□□□□□ -0.65
LRP1-201ENST00000243077 DCTN1Q14203 1278 aa10.99□□□□□ -0.65
LRP1-201ENST00000243077 AMOTL1Q8IY63 956 aa10.98□□□□□ -0.65
LRP1-201ENST00000243077 SMARCA2P51531 1590 aa10.98□□□□□ -0.65
LRP1-201ENST00000243077 CWC22Q9HCG8 908 aaKnown RBP10.98□□□□□ -0.65
LRP1-201ENST00000243077 RRP1P56182 461 aaKnown RBP10.98□□□□□ -0.65
LRP1-201ENST00000243077 MYO15BQ96JP2 1530 aa10.98□□□□□ -0.65
LRP1-201ENST00000243077 CUX2O14529 1486 aa10.98□□□□□ -0.65
LRP1-201ENST00000243077 TAF3Q5VWG9 929 aa10.98□□□□□ -0.65
LRP1-201ENST00000243077 HSP90B2PQ58FF3 399 aa10.97□□□□□ -0.65
LRP1-201ENST00000243077 RRP12Q5JTH9 1297 aaKnown RBP10.97□□□□□ -0.65
LRP1-201ENST00000243077 CCDC39Q9UFE4 941 aa10.97□□□□□ -0.65
LRP1-201ENST00000243077 MIA2Q96PC5 1412 aa10.97□□□□□ -0.65
LRP1-201ENST00000243077 HIP1O00291 1037 aa10.97□□□□□ -0.65
LRP1-201ENST00000243077 MBD3O95983 291 aa10.97□□□□□ -0.65
LRP1-201ENST00000243077 NEXNQ0ZGT2 675 aa10.97□□□□□ -0.65
LRP1-201ENST00000243077 TXLNBQ8N3L3 684 aa10.97□□□□□ -0.65
LRP1-201ENST00000243077 L3MBTL2Q969R5 705 aa10.97□□□□□ -0.65
LRP1-201ENST00000243077 ERC2O15083 957 aa10.97□□□□□ -0.65
LRP1-201ENST00000243077 CCDC66A2RUB6 948 aa10.96□□□□□ -0.65
LRP1-201ENST00000243077 HMGB2P26583 209 aaKnown RBP10.96□□□□□ -0.65
LRP1-201ENST00000243077 PSMA5P28066 241 aa10.96□□□□□ -0.65
LRP1-201ENST00000243077 DDX58O95786 925 aaKnown RBP10.96□□□□□ -0.66
LRP1-201ENST00000243077 MARCH6O60337 910 aa10.96□□□□□ -0.66
LRP1-201ENST00000243077 TRDNQ13061 729 aa10.96□□□□□ -0.66
LRP1-201ENST00000243077 ANKRD45Q5TZF3 282 aa10.96□□□□□ -0.66
LRP1-201ENST00000243077 AMPHP49418 695 aa10.95□□□□□ -0.66
LRP1-201ENST00000243077 SAFBQ15424 915 aaKnown RBP eCLIP10.95□□□□□ -0.66
LRP1-201ENST00000243077 CLSTN1O94985 981 aa10.95□□□□□ -0.66
LRP1-201ENST00000243077 ERCC6Q03468 1493 aa10.95□□□□□ -0.66
LRP1-201ENST00000243077 ABCC8Q09428 1581 aa10.94□□□□□ -0.66
LRP1-201ENST00000243077 SASS6Q6UVJ0 657 aa10.94□□□□□ -0.66
LRP1-201ENST00000243077 DHX16O60231 1041 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms