RNA–Protein interactions for RNA: ENST00000239878.8

UFM1-201, Transcript of ubiquitin fold modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFM1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-201ENST00000239878 CD109Q6YHK3 1445 aa5.54□□□□□ -1.52
UFM1-201ENST00000239878 POGZQ7Z3K3 1410 aa5.54□□□□□ -1.52
UFM1-201ENST00000239878 ATF5Q9Y2D1 282 aaPredicted RBP5.54□□□□□ -1.52
UFM1-201ENST00000239878 KDM6BO15054 1643 aa5.53□□□□□ -1.52
UFM1-201ENST00000239878 FXR2P51116 673 aaKnown RBP eCLIP5.53□□□□□ -1.52
UFM1-201ENST00000239878 ZFYVE16Q7Z3T8 1539 aa5.53□□□□□ -1.52
UFM1-201ENST00000239878 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.53□□□□□ -1.52
UFM1-201ENST00000239878 HNRNPUL2Q1KMD3 747 aaKnown RBP5.53□□□□□ -1.52
UFM1-201ENST00000239878 MIA2Q96PC5 1412 aa5.53□□□□□ -1.52
UFM1-201ENST00000239878 FANCAO15360 1455 aa5.53□□□□□ -1.52
UFM1-201ENST00000239878 KIDINS220Q9ULH0 1771 aa5.52□□□□□ -1.53
UFM1-201ENST00000239878 TSPOAP1O95153 1857 aa5.52□□□□□ -1.53
UFM1-201ENST00000239878 SHANK2Q9UPX8 1470 aa5.52□□□□□ -1.53
UFM1-201ENST00000239878 ADGBQ8N7X0 1667 aa5.52□□□□□ -1.53
UFM1-201ENST00000239878 DNMT1P26358 1616 aaKnown RBP5.52□□□□□ -1.53
UFM1-201ENST00000239878 ABCA6Q8N139 1617 aa5.52□□□□□ -1.53
UFM1-201ENST00000239878 ANP32EQ9BTT0 268 aa5.52□□□□□ -1.53
UFM1-201ENST00000239878 MAGI2Q86UL8 1455 aa5.52□□□□□ -1.53
UFM1-201ENST00000239878 HECW2Q9P2P5 1572 aa5.52□□□□□ -1.53
UFM1-201ENST00000239878 DIP2CQ9Y2E4 1556 aa5.52□□□□□ -1.53
UFM1-201ENST00000239878 MLH3Q9UHC1 1453 aa5.51□□□□□ -1.53
UFM1-201ENST00000239878 MYOM3Q5VTT5 1437 aa5.51□□□□□ -1.53
UFM1-201ENST00000239878 CAMSAP2Q08AD1 1489 aa5.51□□□□□ -1.53
UFM1-201ENST00000239878 AKNAQ7Z591 1439 aa5.51□□□□□ -1.53
UFM1-201ENST00000239878 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.51□□□□□ -1.53
UFM1-201ENST00000239878 PTPN23Q9H3S7 1636 aa5.51□□□□□ -1.53
UFM1-201ENST00000239878 SYCP2Q9BX26 1530 aa5.51□□□□□ -1.53
UFM1-201ENST00000239878 PLEKHH2Q8IVE3 1493 aa5.51□□□□□ -1.53
UFM1-201ENST00000239878 SPRYD3Q8NCJ5 442 aa5.5□□□□□ -1.53
UFM1-201ENST00000239878 AGLP35573 1532 aa5.5□□□□□ -1.53
UFM1-201ENST00000239878 RRBP1Q9P2E9 1410 aaKnown RBP5.5□□□□□ -1.53
UFM1-201ENST00000239878 ADGRL2O95490 1459 aa5.49□□□□□ -1.53
UFM1-201ENST00000239878 DEPDC5O75140 1603 aa5.49□□□□□ -1.53
UFM1-201ENST00000239878 RNF17Q9BXT8 1623 aaKnown RBP5.49□□□□□ -1.53
UFM1-201ENST00000239878 ARHGAP5Q13017 1502 aa5.49□□□□□ -1.53
UFM1-201ENST00000239878 ZNF518AQ6AHZ1 1483 aa5.49□□□□□ -1.53
UFM1-201ENST00000239878 EIF2AK4Q9P2K8 1649 aaKnown RBP5.49□□□□□ -1.53
UFM1-201ENST00000239878 ADAMTSL3P82987 1691 aa5.49□□□□□ -1.53
UFM1-201ENST00000239878 ADGRL1O94910 1474 aa5.49□□□□□ -1.53
UFM1-201ENST00000239878 EVX2Q03828 476 aa5.49□□□□□ -1.53
UFM1-201ENST00000239878 FAM69CQ0P6D2 419 aa5.49□□□□□ -1.53
UFM1-201ENST00000239878 KANK4Q5T7N3 995 aaPredicted RBP5.49□□□□□ -1.53
UFM1-201ENST00000239878 MROH1Q8NDA8 1641 aa5.49□□□□□ -1.53
UFM1-201ENST00000239878 FAM135AQ9P2D6 1515 aa5.49□□□□□ -1.53
UFM1-201ENST00000239878 RTEL1-TNFRSF6BF6WH68 1400 aa5.48□□□□□ -1.53
UFM1-201ENST00000239878 FGD6Q6ZV73 1430 aa5.48□□□□□ -1.53
UFM1-201ENST00000239878 DENND4BO75064 1496 aaPredicted RBP5.48□□□□□ -1.53
UFM1-201ENST00000239878 TRAPPC8Q9Y2L5 1435 aa5.48□□□□□ -1.53
UFM1-201ENST00000239878 PLEKHD1A6NEE1 506 aa5.48□□□□□ -1.53
UFM1-201ENST00000239878 BRPF1P55201 1214 aaPredicted RBP5.48□□□□□ -1.53
UFM1-201ENST00000239878 ATP7AQ04656 1500 aa5.47□□□□□ -1.53
UFM1-201ENST00000239878 VWDEQ8N2E2 1590 aa5.47□□□□□ -1.53
UFM1-201ENST00000239878 REM2Q8IYK8 340 aaPredicted RBP5.47□□□□□ -1.53
UFM1-201ENST00000239878 ANO8Q9HCE9 1232 aaPredicted RBP5.46□□□□□ -1.53
UFM1-201ENST00000239878 MTUS2Q5JR59 1369 aa5.46□□□□□ -1.53
UFM1-201ENST00000239878 CCDC141Q6ZP82 1450 aa5.46□□□□□ -1.53
UFM1-201ENST00000239878 CDK11AQ9UQ88 783 aaPredicted RBP5.46□□□□□ -1.54
UFM1-201ENST00000239878 KDM5DQ9BY66 1539 aa5.46□□□□□ -1.54
UFM1-201ENST00000239878 MROH2AA6NES4 1674 aa5.46□□□□□ -1.54
UFM1-201ENST00000239878 GCC2Q8IWJ2 1684 aa5.46□□□□□ -1.54
UFM1-201ENST00000239878 PLEKHG5O94827 1062 aa5.45□□□□□ -1.54
UFM1-201ENST00000239878 ABCC5O15440 1437 aa5.45□□□□□ -1.54
UFM1-201ENST00000239878 CCNB3Q8WWL7 1395 aa5.45□□□□□ -1.54
UFM1-201ENST00000239878 PRDM15P57071 1507 aaPredicted RBP5.45□□□□□ -1.54
UFM1-201ENST00000239878 RGL2O15211 777 aa5.45□□□□□ -1.54
UFM1-201ENST00000239878 EIF5BO60841 1220 aaKnown RBP5.45□□□□□ -1.54
UFM1-201ENST00000239878 SAMD1Q6SPF0 538 aaPredicted RBP5.45□□□□□ -1.54
UFM1-201ENST00000239878 SCAPERQ9BY12 1400 aa5.45□□□□□ -1.54
UFM1-201ENST00000239878 UNC13BO14795 1591 aa5.45□□□□□ -1.54
UFM1-201ENST00000239878 DAPK1P53355 1430 aa5.44□□□□□ -1.54
UFM1-201ENST00000239878 YEATS2Q9ULM3 1422 aa5.44□□□□□ -1.54
UFM1-201ENST00000239878 PTPRKQ15262 1439 aa5.44□□□□□ -1.54
UFM1-201ENST00000239878 ZC3H13Q5T200 1668 aaKnown RBP5.44□□□□□ -1.54
UFM1-201ENST00000239878 C9orf84Q5VXU9 1444 aa5.44□□□□□ -1.54
UFM1-201ENST00000239878 ATP10AO60312 1499 aa5.43□□□□□ -1.54
UFM1-201ENST00000239878 LMTK2Q8IWU2 1503 aa5.43□□□□□ -1.54
UFM1-201ENST00000239878 ROCK1Q13464 1354 aa5.43□□□□□ -1.54
UFM1-201ENST00000239878 ARID3CA6NKF2 412 aa5.42□□□□□ -1.54
UFM1-201ENST00000239878 DUOX2Q9NRD8 1548 aa5.42□□□□□ -1.54
UFM1-201ENST00000239878 ERBINQ96RT1 1412 aa5.42□□□□□ -1.54
UFM1-201ENST00000239878 EFCAB2Q5VUJ9 269 aa5.41□□□□□ -1.54
UFM1-201ENST00000239878 GABBR2O75899 941 aa5.41□□□□□ -1.54
UFM1-201ENST00000239878 PCDH10Q9P2E7 1040 aa5.41□□□□□ -1.54
UFM1-201ENST00000239878 ZNF644Q9H582 1327 aaPredicted RBP5.41□□□□□ -1.54
UFM1-201ENST00000239878 PITPNM1O00562 1244 aa5.41□□□□□ -1.54
UFM1-201ENST00000239878 KCNH8Q96L42 1107 aa5.41□□□□□ -1.54
UFM1-201ENST00000239878 ECM2O94769 699 aaPredicted RBP5.4□□□□□ -1.54
UFM1-201ENST00000239878 IQGAP3Q86VI3 1631 aa5.4□□□□□ -1.54
UFM1-201ENST00000239878 MADDQ8WXG6 1647 aa5.4□□□□□ -1.54
UFM1-201ENST00000239878 A2MP01023 1474 aa5.4□□□□□ -1.55
UFM1-201ENST00000239878 FER1L4A9Z1Z3 1794 aa5.4□□□□□ -1.55
UFM1-201ENST00000239878 C1orf115Q9H7X2 142 aa5.4□□□□□ -1.55
UFM1-201ENST00000239878 ZNF142P52746 1687 aaPredicted RBP5.4□□□□□ -1.55
UFM1-201ENST00000239878 NCOA1Q15788 1441 aa5.4□□□□□ -1.55
UFM1-201ENST00000239878 C19orf67A6NJJ6 358 aa5.39□□□□□ -1.55
UFM1-201ENST00000239878 RSPH4AQ5TD94 716 aa5.39□□□□□ -1.55
UFM1-201ENST00000239878 C3P01024 1663 aa5.39□□□□□ -1.55
UFM1-201ENST00000239878 ABCC3O15438 1527 aa5.38□□□□□ -1.55
UFM1-201ENST00000239878 UBE2Q2Q8WVN8 375 aa5.38□□□□□ -1.55
UFM1-201ENST00000239878 DHX29Q7Z478 1369 aaKnown RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms