RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 MAGI2Q86UL8 1455 aa27.1■■□□□ 1.93
SNX17-201ENST00000233575 COL17A1Q9UMD9 1497 aaPredicted RBP27.09■■□□□ 1.93
SNX17-201ENST00000233575 PKD2Q13563 968 aa27.09■■□□□ 1.93
SNX17-201ENST00000233575 A2MP01023 1474 aa27.09■■□□□ 1.93
SNX17-201ENST00000233575 YEATS2Q9ULM3 1422 aa27.07■■□□□ 1.92
SNX17-201ENST00000233575 DIP2CQ9Y2E4 1556 aa27.07■■□□□ 1.92
SNX17-201ENST00000233575 IQGAP3Q86VI3 1631 aa27.06■■□□□ 1.92
SNX17-201ENST00000233575 ANKRD30BQ9BXX2 1392 aa27.06■■□□□ 1.92
SNX17-201ENST00000233575 ZMYM4Q5VZL5 1548 aa27.06■■□□□ 1.92
SNX17-201ENST00000233575 EIF2AK4Q9P2K8 1649 aaKnown RBP27.06■■□□□ 1.92
SNX17-201ENST00000233575 TRHP20396 242 aaPredicted RBP27.06■■□□□ 1.92
SNX17-201ENST00000233575 DEPDC5O75140 1603 aa27.05■■□□□ 1.92
SNX17-201ENST00000233575 KIF3BO15066 747 aa27.05■■□□□ 1.92
SNX17-201ENST00000233575 MROH1Q8NDA8 1641 aa27.01■■□□□ 1.91
SNX17-201ENST00000233575 PRDM15P57071 1507 aaPredicted RBP26.96■■□□□ 1.91
SNX17-201ENST00000233575 VWDEQ8N2E2 1590 aa26.94■■□□□ 1.9
SNX17-201ENST00000233575 RNF17Q9BXT8 1623 aaKnown RBP26.94■■□□□ 1.9
SNX17-201ENST00000233575 BCORL1Q5H9F3 1711 aa26.93■■□□□ 1.9
SNX17-201ENST00000233575 TONSLQ96HA7 1378 aa26.93■■□□□ 1.9
SNX17-201ENST00000233575 RPRD2Q5VT52 1461 aaKnown RBP26.92■■□□□ 1.9
SNX17-201ENST00000233575 TIMELESSQ9UNS1 1208 aa26.9■■□□□ 1.9
SNX17-201ENST00000233575 KANK1Q14678 1352 aa26.89■■□□□ 1.89
SNX17-201ENST00000233575 GGT6Q6P531 493 aa26.89■■□□□ 1.89
SNX17-201ENST00000233575 E9PCH4 1651 aa26.88■■□□□ 1.89
SNX17-201ENST00000233575 ATP10AO60312 1499 aa26.88■■□□□ 1.89
SNX17-201ENST00000233575 TET3O43151 1660 aa26.87■■□□□ 1.89
SNX17-201ENST00000233575 PLA2R1Q13018 1463 aa26.86■■□□□ 1.89
SNX17-201ENST00000233575 CEP152O94986 1710 aa26.85■■□□□ 1.89
SNX17-201ENST00000233575 SIGLEC1Q9BZZ2 1709 aa26.85■■□□□ 1.89
SNX17-201ENST00000233575 ARHGEF40Q8TER5 1519 aa26.85■■□□□ 1.89
SNX17-201ENST00000233575 PPP1R15AO75807 674 aaPredicted RBP26.83■■□□□ 1.89
SNX17-201ENST00000233575 REREQ9P2R6 1566 aa26.81■■□□□ 1.88
SNX17-201ENST00000233575 L3MBTL2Q969R5 705 aa26.8■■□□□ 1.88
SNX17-201ENST00000233575 LMTK2Q8IWU2 1503 aa26.79■■□□□ 1.88
SNX17-201ENST00000233575 EFCAB6Q5THR3 1501 aa26.78■■□□□ 1.88
SNX17-201ENST00000233575 ABCC3O15438 1527 aa26.77■■□□□ 1.88
SNX17-201ENST00000233575 CCDC144AA2RUR9 1427 aa26.75■■□□□ 1.87
SNX17-201ENST00000233575 WASHC2CQ9Y4E1 1318 aa26.75■■□□□ 1.87
SNX17-201ENST00000233575 AGLP35573 1532 aa26.74■■□□□ 1.87
SNX17-201ENST00000233575 SPHKAPQ2M3C7 1700 aa26.74■■□□□ 1.87
SNX17-201ENST00000233575 PTPRTO14522 1441 aa26.71■■□□□ 1.87
SNX17-201ENST00000233575 TRPM2O94759 1503 aa26.7■■□□□ 1.87
SNX17-201ENST00000233575 CAMSAP1Q5T5Y3 1602 aa26.7■■□□□ 1.87
SNX17-201ENST00000233575 NPATQ14207 1427 aa26.7■■□□□ 1.86
SNX17-201ENST00000233575 ZC3H13Q5T200 1668 aaKnown RBP26.67■■□□□ 1.86
SNX17-201ENST00000233575 CFAP65Q6ZU64 1925 aaKnown RBP26.67■■□□□ 1.86
SNX17-201ENST00000233575 CLTCL1P53675 1640 aa26.66■■□□□ 1.86
SNX17-201ENST00000233575 MLECQ14165 292 aa26.65■■□□□ 1.86
SNX17-201ENST00000233575 UGGT1Q9NYU2 1555 aa26.64■■□□□ 1.86
SNX17-201ENST00000233575 ZNF316A6NFI3 1004 aaPredicted RBP26.61■■□□□ 1.85
SNX17-201ENST00000233575 NBPF8Q3BBV2 869 aa26.61■■□□□ 1.85
SNX17-201ENST00000233575 RGL3Q3MIN7 710 aa26.61■■□□□ 1.85
SNX17-201ENST00000233575 CLTCQ00610 1675 aaKnown RBP26.58■■□□□ 1.85
SNX17-201ENST00000233575 ARID4BQ4LE39 1312 aaPredicted RBP26.58■■□□□ 1.85
SNX17-201ENST00000233575 SPATA31E1Q6ZUB1 1445 aa26.57■■□□□ 1.84
SNX17-201ENST00000233575 ARHGAP31Q2M1Z3 1444 aa26.57■■□□□ 1.84
SNX17-201ENST00000233575 DCAF11Q8TEB1 546 aa26.56■■□□□ 1.84
SNX17-201ENST00000233575 KDM2AQ9Y2K7 1162 aa26.55■■□□□ 1.84
SNX17-201ENST00000233575 ZNF326Q5BKZ1 582 aaKnown RBP26.54■■□□□ 1.84
SNX17-201ENST00000233575 NOS1P29475 1434 aa26.53■■□□□ 1.84
SNX17-201ENST00000233575 PPP6R1Q9UPN7 881 aa26.53■■□□□ 1.84
SNX17-201ENST00000233575 CNTLNQ9NXG0 1405 aa26.52■■□□□ 1.84
SNX17-201ENST00000233575 SYNMO15061 1565 aa26.52■■□□□ 1.84
SNX17-201ENST00000233575 PREX1Q8TCU6 1659 aa26.5■■□□□ 1.83
SNX17-201ENST00000233575 UHRF1BP1Q6BDS2 1440 aa26.49■■□□□ 1.83
SNX17-201ENST00000233575 KIF1BO60333 1816 aa26.49■■□□□ 1.83
SNX17-201ENST00000233575 FBXO31Q5XUX0 539 aaPredicted RBP26.48■■□□□ 1.83
SNX17-201ENST00000233575 MROH2AA6NES4 1674 aa26.48■■□□□ 1.83
SNX17-201ENST00000233575 HIRIP3Q9BW71 556 aaPredicted RBP26.46■■□□□ 1.83
SNX17-201ENST00000233575 PIK3C2BO00750 1634 aa26.45■■□□□ 1.83
SNX17-201ENST00000233575 ERVK-7P63135 1459 aa26.43■■□□□ 1.82
SNX17-201ENST00000233575 NEURL4Q96JN8 1562 aa26.43■■□□□ 1.82
SNX17-201ENST00000233575 PRAG1Q86YV5 1406 aa26.43■■□□□ 1.82
SNX17-201ENST00000233575 ADGRB3O60242 1522 aa26.42■■□□□ 1.82
SNX17-201ENST00000233575 ESF1Q9H501 851 aaKnown RBP26.42■■□□□ 1.82
SNX17-201ENST00000233575 ZMYM3Q14202 1370 aa26.4■■□□□ 1.82
SNX17-201ENST00000233575 CHGAP10645 457 aaKnown RBP26.4■■□□□ 1.82
SNX17-201ENST00000233575 IDI1Q13907 227 aa26.39■■□□□ 1.81
SNX17-201ENST00000233575 RALGAPBQ86X10 1494 aa26.39■■□□□ 1.81
SNX17-201ENST00000233575 SPATA31D1Q6ZQQ2 1576 aa26.37■■□□□ 1.81
SNX17-201ENST00000233575 TRPM1Q7Z4N2 1603 aa26.36■■□□□ 1.81
SNX17-201ENST00000233575 IFT172Q9UG01 1749 aa26.35■■□□□ 1.81
SNX17-201ENST00000233575 MADDQ8WXG6 1647 aa26.34■■□□□ 1.81
SNX17-201ENST00000233575 HSPA5P11021 654 aaKnown RBP26.34■■□□□ 1.81
SNX17-201ENST00000233575 SLC52A1Q9NWF4 448 aa26.34■■□□□ 1.81
SNX17-201ENST00000233575 FER1L4A9Z1Z3 1794 aa26.32■■□□□ 1.8
SNX17-201ENST00000233575 MYO5BQ9ULV0 1848 aa26.31■■□□□ 1.8
SNX17-201ENST00000233575 EIF4G2P78344 907 aaKnown RBP eCLIP26.31■■□□□ 1.8
SNX17-201ENST00000233575 NBPF1Q3BBV0 1214 aa26.29■■□□□ 1.8
SNX17-201ENST00000233575 TMEM131LA2VDJ0 1609 aa26.29■■□□□ 1.8
SNX17-201ENST00000233575 DIEXFQ68CQ4 756 aaKnown RBP26.29■■□□□ 1.8
SNX17-201ENST00000233575 PPLO60437 1756 aa26.29■■□□□ 1.8
SNX17-201ENST00000233575 ROCK2O75116 1388 aaKnown RBP26.28■■□□□ 1.8
SNX17-201ENST00000233575 MYOM2P54296 1465 aa26.28■■□□□ 1.8
SNX17-201ENST00000233575 CEBPAP49715 358 aaPredicted RBP26.27■■□□□ 1.8
SNX17-201ENST00000233575 ADGRF5Q8IZF2 1346 aa26.27■■□□□ 1.8
SNX17-201ENST00000233575 CARD11Q9BXL7 1154 aa26.27■■□□□ 1.8
SNX17-201ENST00000233575 C3P01024 1663 aa26.25■■□□□ 1.79
SNX17-201ENST00000233575 USP47Q96K76 1375 aa26.25■■□□□ 1.79
SNX17-201ENST00000233575 STAC3Q96MF2 364 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms