RNA–Protein interactions for RNA: ENST00000227157.8

LDHA-201, Transcript of lactate dehydrogenase A, humanhuman

TSL 3 BASIC

Gene LDHA, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-201ENST00000227157 RIMS1Q86UR5 1692 aaKnown RBP12.2□□□□□ -0.46
LDHA-201ENST00000227157 REREQ9P2R6 1566 aa12.19□□□□□ -0.46
LDHA-201ENST00000227157 CFAP65Q6ZU64 1925 aaKnown RBP12.19□□□□□ -0.46
LDHA-201ENST00000227157 ADGRL2O95490 1459 aa12.19□□□□□ -0.46
LDHA-201ENST00000227157 DHX29Q7Z478 1369 aaKnown RBP12.19□□□□□ -0.46
LDHA-201ENST00000227157 DUOX2Q9NRD8 1548 aa12.18□□□□□ -0.46
LDHA-201ENST00000227157 ADAMTSL3P82987 1691 aa12.18□□□□□ -0.46
LDHA-201ENST00000227157 CLTCQ00610 1675 aaKnown RBP12.17□□□□□ -0.46
LDHA-201ENST00000227157 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.17□□□□□ -0.46
LDHA-201ENST00000227157 CEP152O94986 1710 aa12.17□□□□□ -0.46
LDHA-201ENST00000227157 GCC2Q8IWJ2 1684 aa12.16□□□□□ -0.46
LDHA-201ENST00000227157 ANKRD50Q9ULJ7 1429 aa12.16□□□□□ -0.46
LDHA-201ENST00000227157 AGLP35573 1532 aa12.16□□□□□ -0.46
LDHA-201ENST00000227157 MROH1Q8NDA8 1641 aa12.15□□□□□ -0.46
LDHA-201ENST00000227157 CEBPAP49715 358 aaPredicted RBP12.14□□□□□ -0.47
LDHA-201ENST00000227157 NAIPQ13075 1403 aa12.14□□□□□ -0.47
LDHA-201ENST00000227157 EIF2AK4Q9P2K8 1649 aaKnown RBP12.14□□□□□ -0.47
LDHA-201ENST00000227157 ROCK1Q13464 1354 aa12.14□□□□□ -0.47
LDHA-201ENST00000227157 ERBINQ96RT1 1412 aa12.13□□□□□ -0.47
LDHA-201ENST00000227157 RNF17Q9BXT8 1623 aaKnown RBP12.13□□□□□ -0.47
LDHA-201ENST00000227157 DEPDC5O75140 1603 aa12.12□□□□□ -0.47
LDHA-201ENST00000227157 C3P01024 1663 aa12.11□□□□□ -0.47
LDHA-201ENST00000227157 HFM1A2PYH4 1435 aa12.11□□□□□ -0.47
LDHA-201ENST00000227157 PRDM15P57071 1507 aaPredicted RBP12.09□□□□□ -0.47
LDHA-201ENST00000227157 WASHC2CQ9Y4E1 1318 aa12.09□□□□□ -0.47
LDHA-201ENST00000227157 PTPRMP28827 1452 aa12.09□□□□□ -0.47
LDHA-201ENST00000227157 ESF1Q9H501 851 aaKnown RBP12.09□□□□□ -0.47
LDHA-201ENST00000227157 TRIM26Q12899 539 aaPredicted RBP12.08□□□□□ -0.48
LDHA-201ENST00000227157 UNC13BO14795 1591 aa12.08□□□□□ -0.48
LDHA-201ENST00000227157 ABCC3O15438 1527 aa12.08□□□□□ -0.48
LDHA-201ENST00000227157 CAMSAP1Q5T5Y3 1602 aa12.08□□□□□ -0.48
LDHA-201ENST00000227157 KDM5DQ9BY66 1539 aa12.08□□□□□ -0.48
LDHA-201ENST00000227157 TRIM52Q96A61 297 aa12.07□□□□□ -0.48
LDHA-201ENST00000227157 FBXO31Q5XUX0 539 aaPredicted RBP12.06□□□□□ -0.48
LDHA-201ENST00000227157 PCGF6Q9BYE7 350 aa12.06□□□□□ -0.48
LDHA-201ENST00000227157 RAB3GAP2Q9H2M9 1393 aa12.06□□□□□ -0.48
LDHA-201ENST00000227157 NUP155O75694 1391 aa12.06□□□□□ -0.48
LDHA-201ENST00000227157 SETD5Q9C0A6 1442 aa12.05□□□□□ -0.48
LDHA-201ENST00000227157 MROH2AA6NES4 1674 aa12.05□□□□□ -0.48
LDHA-201ENST00000227157 ZC3H13Q5T200 1668 aaKnown RBP12.05□□□□□ -0.48
LDHA-201ENST00000227157 ZMYM3Q14202 1370 aa12.05□□□□□ -0.48
LDHA-201ENST00000227157 VWDEQ8N2E2 1590 aa12.04□□□□□ -0.48
LDHA-201ENST00000227157 IQGAP3Q86VI3 1631 aa12.04□□□□□ -0.48
LDHA-201ENST00000227157 E9PCH4 1651 aa12.03□□□□□ -0.48
LDHA-201ENST00000227157 FAM135AQ9P2D6 1515 aa12.03□□□□□ -0.48
LDHA-201ENST00000227157 KANK1Q14678 1352 aa12.02□□□□□ -0.48
LDHA-201ENST00000227157 TET3O43151 1660 aa12.01□□□□□ -0.49
LDHA-201ENST00000227157 PREX1Q8TCU6 1659 aa12.01□□□□□ -0.49
LDHA-201ENST00000227157 NPATQ14207 1427 aa12.01□□□□□ -0.49
LDHA-201ENST00000227157 EFCAB6Q5THR3 1501 aa12.01□□□□□ -0.49
LDHA-201ENST00000227157 CNTLNQ9NXG0 1405 aa12□□□□□ -0.49
LDHA-201ENST00000227157 PZPP20742 1482 aa12□□□□□ -0.49
LDHA-201ENST00000227157 UGGT1Q9NYU2 1555 aa11.98□□□□□ -0.49
LDHA-201ENST00000227157 SLC4A1APQ9BWU0 796 aaKnown RBP11.98□□□□□ -0.49
LDHA-201ENST00000227157 LMTK2Q8IWU2 1503 aa11.98□□□□□ -0.49
LDHA-201ENST00000227157 MYO3AQ8NEV4 1616 aa11.97□□□□□ -0.49
LDHA-201ENST00000227157 SETD1BQ9UPS6 1966 aaKnown RBP11.97□□□□□ -0.49
LDHA-201ENST00000227157 PKD2Q13563 968 aa11.97□□□□□ -0.49
LDHA-201ENST00000227157 PPP6R1Q9UPN7 881 aa11.97□□□□□ -0.49
LDHA-201ENST00000227157 MYO5BQ9ULV0 1848 aa11.96□□□□□ -0.49
LDHA-201ENST00000227157 SYNMO15061 1565 aa11.96□□□□□ -0.49
LDHA-201ENST00000227157 ERVK-7P63135 1459 aa11.96□□□□□ -0.49
LDHA-201ENST00000227157 HSPA2P54652 639 aa11.96□□□□□ -0.49
LDHA-201ENST00000227157 SPHKAPQ2M3C7 1700 aa11.96□□□□□ -0.5
LDHA-201ENST00000227157 MPHOSPH9Q99550 1183 aa11.95□□□□□ -0.5
LDHA-201ENST00000227157 SPATA31D1Q6ZQQ2 1576 aa11.95□□□□□ -0.5
LDHA-201ENST00000227157 TNRQ92752 1358 aa11.94□□□□□ -0.5
LDHA-201ENST00000227157 LMTK3Q96Q04 1460 aa11.93□□□□□ -0.5
LDHA-201ENST00000227157 PIK3C2BO00750 1634 aa11.93□□□□□ -0.5
LDHA-201ENST00000227157 ARHGAP31Q2M1Z3 1444 aa11.93□□□□□ -0.5
LDHA-201ENST00000227157 PIAS4Q8N2W9 510 aaPredicted RBP11.91□□□□□ -0.5
LDHA-201ENST00000227157 CEP170BQ9Y4F5 1589 aaPredicted RBP11.91□□□□□ -0.5
LDHA-201ENST00000227157 UHRF1BP1Q6BDS2 1440 aa11.91□□□□□ -0.5
LDHA-201ENST00000227157 CLTCL1P53675 1640 aa11.9□□□□□ -0.5
LDHA-201ENST00000227157 NOS1P29475 1434 aa11.9□□□□□ -0.5
LDHA-201ENST00000227157 PLA2R1Q13018 1463 aa11.9□□□□□ -0.5
LDHA-201ENST00000227157 UBR1Q8IWV7 1749 aa11.9□□□□□ -0.5
LDHA-201ENST00000227157 ZNF142P52746 1687 aaPredicted RBP11.89□□□□□ -0.51
LDHA-201ENST00000227157 CHGAP10645 457 aaKnown RBP11.89□□□□□ -0.51
LDHA-201ENST00000227157 IDI1Q13907 227 aa11.89□□□□□ -0.51
LDHA-201ENST00000227157 RPRD2Q5VT52 1461 aaKnown RBP11.89□□□□□ -0.51
LDHA-201ENST00000227157 NUTM2DQ5VT03 806 aaPredicted RBP11.87□□□□□ -0.51
LDHA-201ENST00000227157 BCL11AQ9H165 835 aa11.87□□□□□ -0.51
LDHA-201ENST00000227157 KIF1BO60333 1816 aa11.86□□□□□ -0.51
LDHA-201ENST00000227157 TRPM2O94759 1503 aa11.86□□□□□ -0.51
LDHA-201ENST00000227157 STAG3Q9UJ98 1225 aa11.86□□□□□ -0.51
LDHA-201ENST00000227157 A2ML1A8K2U0 1454 aa11.86□□□□□ -0.51
LDHA-201ENST00000227157 DHX57Q6P158 1386 aaKnown RBP11.85□□□□□ -0.51
LDHA-201ENST00000227157 PTPRTO14522 1441 aa11.85□□□□□ -0.51
LDHA-201ENST00000227157 STRCQ7RTU9 1775 aa11.85□□□□□ -0.51
LDHA-201ENST00000227157 HRCP23327 699 aa11.85□□□□□ -0.51
LDHA-201ENST00000227157 NCBP3Q53F19 620 aaKnown RBP11.85□□□□□ -0.51
LDHA-201ENST00000227157 TMEM131LA2VDJ0 1609 aa11.84□□□□□ -0.51
LDHA-201ENST00000227157 NLRP1Q9C000 1473 aa11.84□□□□□ -0.51
LDHA-201ENST00000227157 ADGRB3O60242 1522 aa11.83□□□□□ -0.52
LDHA-201ENST00000227157 NCKAP5LQ9HCH0 1330 aa11.83□□□□□ -0.52
LDHA-201ENST00000227157 RGL3Q3MIN7 710 aa11.82□□□□□ -0.52
LDHA-201ENST00000227157 SIN3AQ96ST3 1273 aa11.82□□□□□ -0.52
LDHA-201ENST00000227157 POLR1AO95602 1720 aaPredicted RBP11.82□□□□□ -0.52
LDHA-201ENST00000227157 CCDC144AA2RUR9 1427 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms