RNA–Protein interactions for RNA: ENST00000226798.8

FRG1-201, Transcript of FSHD region gene 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FRG1, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRG1-201ENST00000226798 ZNF335Q9H4Z2 1342 aaPredicted RBP18.78■□□□□ 0.6
FRG1-201ENST00000226798 CEP162Q5TB80 1403 aa18.78■□□□□ 0.6
FRG1-201ENST00000226798 SOCS7O14512 581 aa18.78■□□□□ 0.6
FRG1-201ENST00000226798 PKD2Q13563 968 aa18.78■□□□□ 0.6
FRG1-201ENST00000226798 A2ML1A8K2U0 1454 aa18.77■□□□□ 0.6
FRG1-201ENST00000226798 POLR1AO95602 1720 aaPredicted RBP18.77■□□□□ 0.6
FRG1-201ENST00000226798 ZNF644Q9H582 1327 aaPredicted RBP18.77■□□□□ 0.6
FRG1-201ENST00000226798 GGT6Q6P531 493 aa18.77■□□□□ 0.6
FRG1-201ENST00000226798 FAM135AQ9P2D6 1515 aa18.76■□□□□ 0.59
FRG1-201ENST00000226798 NEURL4Q96JN8 1562 aa18.73■□□□□ 0.59
FRG1-201ENST00000226798 DHX29Q7Z478 1369 aaKnown RBP18.73■□□□□ 0.59
FRG1-201ENST00000226798 KDM5DQ9BY66 1539 aa18.73■□□□□ 0.59
FRG1-201ENST00000226798 CCDC141Q6ZP82 1450 aa18.72■□□□□ 0.59
FRG1-201ENST00000226798 PZPP20742 1482 aa18.71■□□□□ 0.59
FRG1-201ENST00000226798 CAMSAP2Q08AD1 1489 aa18.71■□□□□ 0.59
FRG1-201ENST00000226798 UBAP1LF5GYI3 381 aa18.69■□□□□ 0.58
FRG1-201ENST00000226798 NCOA2Q15596 1464 aa18.69■□□□□ 0.58
FRG1-201ENST00000226798 ARHGEF5Q12774 1597 aa18.68■□□□□ 0.58
FRG1-201ENST00000226798 TNRQ92752 1358 aa18.68■□□□□ 0.58
FRG1-201ENST00000226798 CPS1P31327 1500 aa18.66■□□□□ 0.58
FRG1-201ENST00000226798 RNF17Q9BXT8 1623 aaKnown RBP18.64■□□□□ 0.57
FRG1-201ENST00000226798 KIF3BO15066 747 aa18.64■□□□□ 0.57
FRG1-201ENST00000226798 HOXD11P31277 338 aaPredicted RBP18.64■□□□□ 0.57
FRG1-201ENST00000226798 DEPDC5O75140 1603 aa18.63■□□□□ 0.57
FRG1-201ENST00000226798 FBXO31Q5XUX0 539 aaPredicted RBP18.63■□□□□ 0.57
FRG1-201ENST00000226798 NLRP1Q9C000 1473 aa18.63■□□□□ 0.57
FRG1-201ENST00000226798 SHANK2Q9UPX8 1470 aa18.63■□□□□ 0.57
FRG1-201ENST00000226798 VWDEQ8N2E2 1590 aa18.63■□□□□ 0.57
FRG1-201ENST00000226798 ZC3H13Q5T200 1668 aaKnown RBP18.62■□□□□ 0.57
FRG1-201ENST00000226798 RSPH4AQ5TD94 716 aa18.61■□□□□ 0.57
FRG1-201ENST00000226798 UGGT1Q9NYU2 1555 aa18.6■□□□□ 0.57
FRG1-201ENST00000226798 MAST1Q9Y2H9 1570 aa18.6■□□□□ 0.57
FRG1-201ENST00000226798 MED14O60244 1454 aa18.6■□□□□ 0.57
FRG1-201ENST00000226798 MIA2Q96PC5 1412 aa18.59■□□□□ 0.57
FRG1-201ENST00000226798 WASHC2CQ9Y4E1 1318 aa18.59■□□□□ 0.57
FRG1-201ENST00000226798 EIF2AK4Q9P2K8 1649 aaKnown RBP18.59■□□□□ 0.57
FRG1-201ENST00000226798 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.58■□□□□ 0.57
FRG1-201ENST00000226798 IQGAP1P46940 1657 aa18.58■□□□□ 0.57
FRG1-201ENST00000226798 CACNB1Q02641 598 aaPredicted RBP18.58■□□□□ 0.56
FRG1-201ENST00000226798 ABCC3O15438 1527 aa18.58■□□□□ 0.56
FRG1-201ENST00000226798 ALKQ9UM73 1620 aa18.57■□□□□ 0.56
FRG1-201ENST00000226798 MED1Q15648 1581 aaPredicted RBP18.57■□□□□ 0.56
FRG1-201ENST00000226798 MROH1Q8NDA8 1641 aa18.56■□□□□ 0.56
FRG1-201ENST00000226798 DCAF8L1A6NGE4 600 aa18.56■□□□□ 0.56
FRG1-201ENST00000226798 LRRC9Q6ZRR7 1453 aa18.55■□□□□ 0.56
FRG1-201ENST00000226798 CNKSR2Q8WXI2 1034 aa18.55■□□□□ 0.56
FRG1-201ENST00000226798 NPHP4O75161 1426 aaPredicted RBP18.55■□□□□ 0.56
FRG1-201ENST00000226798 STRCP1A6NGW2 1772 aa18.55■□□□□ 0.56
FRG1-201ENST00000226798 ANKLE2Q86XL3 938 aa18.54■□□□□ 0.56
FRG1-201ENST00000226798 THEMISQ8N1K5 641 aaPredicted RBP18.54■□□□□ 0.56
FRG1-201ENST00000226798 HSPA1LP34931 641 aa18.53■□□□□ 0.56
FRG1-201ENST00000226798 ERVK-7P63135 1459 aa18.52■□□□□ 0.56
FRG1-201ENST00000226798 CEP152O94986 1710 aa18.52■□□□□ 0.56
FRG1-201ENST00000226798 SYNMO15061 1565 aa18.52■□□□□ 0.56
FRG1-201ENST00000226798 TOM1O60784 492 aa18.51■□□□□ 0.55
FRG1-201ENST00000226798 TSPY4P0CV99 314 aa18.51■□□□□ 0.55
FRG1-201ENST00000226798 TSPY10P0CW01 314 aa18.51■□□□□ 0.55
FRG1-201ENST00000226798 UBR1Q8IWV7 1749 aa18.51■□□□□ 0.55
FRG1-201ENST00000226798 VPS8Q8N3P4 1428 aa18.5■□□□□ 0.55
FRG1-201ENST00000226798 PIP4K2BP78356 416 aa18.5■□□□□ 0.55
FRG1-201ENST00000226798 MAP3K1Q13233 1512 aa18.48■□□□□ 0.55
FRG1-201ENST00000226798 LRRC7Q96NW7 1537 aa18.47■□□□□ 0.55
FRG1-201ENST00000226798 CROCC2H7BZ55 1655 aa18.47■□□□□ 0.55
FRG1-201ENST00000226798 PRDM15P57071 1507 aaPredicted RBP18.46■□□□□ 0.55
FRG1-201ENST00000226798 DUOX2Q9NRD8 1548 aa18.46■□□□□ 0.55
FRG1-201ENST00000226798 CFAP65Q6ZU64 1925 aaKnown RBP18.46■□□□□ 0.55
FRG1-201ENST00000226798 RNF216Q9NWF9 866 aaPredicted RBP18.45■□□□□ 0.54
FRG1-201ENST00000226798 MYOM3Q5VTT5 1437 aa18.45■□□□□ 0.54
FRG1-201ENST00000226798 SLIT1O75093 1534 aa18.43■□□□□ 0.54
FRG1-201ENST00000226798 SCAF11Q99590 1463 aaKnown RBP18.42■□□□□ 0.54
FRG1-201ENST00000226798 ARHGAP23Q9P227 1491 aa18.42■□□□□ 0.54
FRG1-201ENST00000226798 XIRP1Q702N8 1843 aaKnown RBP18.41■□□□□ 0.54
FRG1-201ENST00000226798 ARHGAP31Q2M1Z3 1444 aa18.4■□□□□ 0.54
FRG1-201ENST00000226798 KANK4Q5T7N3 995 aaPredicted RBP18.4■□□□□ 0.54
FRG1-201ENST00000226798 ERBINQ96RT1 1412 aa18.39■□□□□ 0.53
FRG1-201ENST00000226798 PIK3C2BO00750 1634 aa18.38■□□□□ 0.53
FRG1-201ENST00000226798 KIF15Q9NS87 1388 aa18.37■□□□□ 0.53
FRG1-201ENST00000226798 KDM5AP29375 1690 aaKnown RBP18.37■□□□□ 0.53
FRG1-201ENST00000226798 PTPN23Q9H3S7 1636 aa18.36■□□□□ 0.53
FRG1-201ENST00000226798 ABCC5O15440 1437 aa18.35■□□□□ 0.53
FRG1-201ENST00000226798 LTKP29376 864 aa18.34■□□□□ 0.53
FRG1-201ENST00000226798 RNF39Q9H2S5 420 aa18.33■□□□□ 0.52
FRG1-201ENST00000226798 LMTK2Q8IWU2 1503 aa18.31■□□□□ 0.52
FRG1-201ENST00000226798 DAPK1P53355 1430 aa18.31■□□□□ 0.52
FRG1-201ENST00000226798 TMEM2Q9UHN6 1383 aa18.3■□□□□ 0.52
FRG1-201ENST00000226798 EFCAB6Q5THR3 1501 aa18.29■□□□□ 0.52
FRG1-201ENST00000226798 LOC105371045A0A1W2PR82 267 aa18.29■□□□□ 0.52
FRG1-201ENST00000226798 TXNDC2Q86VQ3 553 aa18.29■□□□□ 0.52
FRG1-201ENST00000226798 RRP7BPQ9NSQ0 103 aa18.27■□□□□ 0.52
FRG1-201ENST00000226798 FGD6Q6ZV73 1430 aa18.26■□□□□ 0.51
FRG1-201ENST00000226798 TET3O43151 1660 aa18.26■□□□□ 0.51
FRG1-201ENST00000226798 ADGRB3O60242 1522 aa18.25■□□□□ 0.51
FRG1-201ENST00000226798 EID1Q9Y6B2 187 aa18.25■□□□□ 0.51
FRG1-201ENST00000226798 KANK1Q14678 1352 aa18.25■□□□□ 0.51
FRG1-201ENST00000226798 NWD1Q149M9 1564 aa18.24■□□□□ 0.51
FRG1-201ENST00000226798 NOS1P29475 1434 aa18.23■□□□□ 0.51
FRG1-201ENST00000226798 FAM135BQ49AJ0 1406 aa18.23■□□□□ 0.51
FRG1-201ENST00000226798 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.22■□□□□ 0.515e-7■■■■□ 21.5
FRG1-201ENST00000226798 ROBO1Q9Y6N7 1651 aa18.22■□□□□ 0.51
FRG1-201ENST00000226798 TMEM94Q12767 1356 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms