RNA–Protein interactions for RNA: ENST00000226247.2

FOXN1-201, Transcript of forkhead box N1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN1, Length 3,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1-201ENST00000226247 UGGT2Q9NYU1 1516 aa13.58□□□□□ -0.24
FOXN1-201ENST00000226247 EHBP1L1Q8N3D4 1523 aa13.57□□□□□ -0.24
FOXN1-201ENST00000226247 TEX14Q8IWB6 1497 aa13.57□□□□□ -0.24
FOXN1-201ENST00000226247 MYBBP1AQ9BQG0 1328 aaKnown RBP13.57□□□□□ -0.24
FOXN1-201ENST00000226247 A0A0U1RQG5 324 aaPredicted RBP13.57□□□□□ -0.24
FOXN1-201ENST00000226247 CDK13Q14004 1512 aaKnown RBP13.56□□□□□ -0.24
FOXN1-201ENST00000226247 PODXL2Q9NZ53 605 aa13.56□□□□□ -0.24
FOXN1-201ENST00000226247 LRRIQ1Q96JM4 1722 aa13.56□□□□□ -0.24
FOXN1-201ENST00000226247 RGS3P49796 1198 aa13.56□□□□□ -0.24
FOXN1-201ENST00000226247 C20orf194Q5TEA3 1177 aa13.56□□□□□ -0.24
FOXN1-201ENST00000226247 MS4A1P11836 297 aa13.55□□□□□ -0.24
FOXN1-201ENST00000226247 HECW1Q76N89 1606 aa13.55□□□□□ -0.24
FOXN1-201ENST00000226247 RGL3Q3MIN7 710 aa13.55□□□□□ -0.24
FOXN1-201ENST00000226247 CFDP1Q9UEE9 299 aaPredicted RBP13.55□□□□□ -0.24
FOXN1-201ENST00000226247 KIF15Q9NS87 1388 aa13.55□□□□□ -0.24
FOXN1-201ENST00000226247 DDRGK1Q96HY6 314 aa13.54□□□□□ -0.24
FOXN1-201ENST00000226247 NUP160Q12769 1436 aa13.54□□□□□ -0.24
FOXN1-201ENST00000226247 RALBP1Q15311 655 aa13.53□□□□□ -0.24
FOXN1-201ENST00000226247 FAM69CQ0P6D2 419 aa13.52□□□□□ -0.24
FOXN1-201ENST00000226247 SENP3Q9H4L4 574 aaPredicted RBP13.52□□□□□ -0.24
FOXN1-201ENST00000226247 RSPH6AQ9H0K4 717 aa13.52□□□□□ -0.25
FOXN1-201ENST00000226247 NLRP13Q86W25 1043 aa13.52□□□□□ -0.25
FOXN1-201ENST00000226247 DAPK1P53355 1430 aa13.52□□□□□ -0.25
FOXN1-201ENST00000226247 MIA2Q96PC5 1412 aa13.52□□□□□ -0.25
FOXN1-201ENST00000226247 WASHC2CQ9Y4E1 1318 aa13.52□□□□□ -0.25
FOXN1-201ENST00000226247 FRAT2O75474 233 aaPredicted RBP13.51□□□□□ -0.25
FOXN1-201ENST00000226247 ABCC5O15440 1437 aa13.51□□□□□ -0.25
FOXN1-201ENST00000226247 DISP1Q96F81 1524 aa13.51□□□□□ -0.25
FOXN1-201ENST00000226247 TCOF1Q13428 1488 aaKnown RBP13.5□□□□□ -0.25
FOXN1-201ENST00000226247 HNRNPMP52272 730 aaKnown RBP eCLIP13.5□□□□□ -0.25
FOXN1-201ENST00000226247 BCORL1Q5H9F3 1711 aa13.5□□□□□ -0.25
FOXN1-201ENST00000226247 EPRSP07814 1512 aaKnown RBP13.5□□□□□ -0.25
FOXN1-201ENST00000226247 BRD4O60885 1362 aaPredicted RBP13.5□□□□□ -0.25
FOXN1-201ENST00000226247 SAMD9Q5K651 1589 aa13.49□□□□□ -0.25
FOXN1-201ENST00000226247 GCC2Q8IWJ2 1684 aa13.48□□□□□ -0.25
FOXN1-201ENST00000226247 LRPPRCP42704 1394 aaKnown RBP13.48□□□□□ -0.25
FOXN1-201ENST00000226247 ROCK2O75116 1388 aaKnown RBP13.47□□□□□ -0.25
FOXN1-201ENST00000226247 NUP155O75694 1391 aa13.47□□□□□ -0.25
FOXN1-201ENST00000226247 PDE3BQ13370 1112 aa13.47□□□□□ -0.25
FOXN1-201ENST00000226247 KTN1Q86UP2 1357 aaKnown RBP13.47□□□□□ -0.25
FOXN1-201ENST00000226247 ARID3AQ99856 593 aa13.47□□□□□ -0.25
FOXN1-201ENST00000226247 ARHGEF11O15085 1522 aa13.45□□□□□ -0.26
FOXN1-201ENST00000226247 HSP90AA2PQ14568 343 aaPredicted RBP13.45□□□□□ -0.26
FOXN1-201ENST00000226247 NBPF1Q3BBV0 1214 aa13.45□□□□□ -0.26
FOXN1-201ENST00000226247 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.45□□□□□ -0.26
FOXN1-201ENST00000226247 KIAA0556O60303 1618 aa13.45□□□□□ -0.26
FOXN1-201ENST00000226247 DNAJC5Q9H3Z4 198 aa13.45□□□□□ -0.26
FOXN1-201ENST00000226247 PANK3Q9H999 370 aa13.44□□□□□ -0.26
FOXN1-201ENST00000226247 ROCK1Q13464 1354 aa13.44□□□□□ -0.26
FOXN1-201ENST00000226247 KIAA1107Q9UPP5 1409 aa13.44□□□□□ -0.26
FOXN1-201ENST00000226247 GZF1Q9H116 711 aaPredicted RBP13.44□□□□□ -0.26
FOXN1-201ENST00000226247 ADAMTS8Q9UP79 889 aa13.43□□□□□ -0.26
FOXN1-201ENST00000226247 PZPP20742 1482 aa13.43□□□□□ -0.26
FOXN1-201ENST00000226247 FAM161AQ3B820 660 aa13.42□□□□□ -0.26
FOXN1-201ENST00000226247 SLKQ9H2G2 1235 aaPredicted RBP13.42□□□□□ -0.26
FOXN1-201ENST00000226247 MLECQ14165 292 aa13.42□□□□□ -0.26
FOXN1-201ENST00000226247 AFAP1Q8N556 730 aa13.41□□□□□ -0.26
FOXN1-201ENST00000226247 RAPGEF3O95398 923 aa13.41□□□□□ -0.26
FOXN1-201ENST00000226247 RRAGDQ9NQL2 400 aaPredicted RBP13.41□□□□□ -0.26
FOXN1-201ENST00000226247 HSP90AA1P07900 732 aaKnown RBP13.39□□□□□ -0.27
FOXN1-201ENST00000226247 SPRYD3Q8NCJ5 442 aa13.39□□□□□ -0.27
FOXN1-201ENST00000226247 POGKQ9P215 609 aa13.39□□□□□ -0.27
FOXN1-201ENST00000226247 WDR43Q15061 677 aaKnown RBP eCLIP13.39□□□□□ -0.27
FOXN1-201ENST00000226247 C8orf34Q49A92 452 aa13.39□□□□□ -0.27
FOXN1-201ENST00000226247 CENPQQ7L2Z9 268 aaPredicted RBP13.39□□□□□ -0.27
FOXN1-201ENST00000226247 NUP153P49790 1475 aaKnown RBP13.39□□□□□ -0.27
FOXN1-201ENST00000226247 CCDC146Q8IYE0 955 aa13.38□□□□□ -0.27
FOXN1-201ENST00000226247 FAM43AQ8N2R8 423 aa13.38□□□□□ -0.27
FOXN1-201ENST00000226247 PNNQ9H307 717 aaKnown RBP13.38□□□□□ -0.27
FOXN1-201ENST00000226247 PER1O15534 1290 aaPredicted RBP13.38□□□□□ -0.27
FOXN1-201ENST00000226247 TSPY4P0CV99 314 aa13.38□□□□□ -0.27
FOXN1-201ENST00000226247 TSPY10P0CW01 314 aa13.38□□□□□ -0.27
FOXN1-201ENST00000226247 ATP10BO94823 1461 aa13.37□□□□□ -0.27
FOXN1-201ENST00000226247 ANKRD30AQ9BXX3 1397 aa13.37□□□□□ -0.27
FOXN1-201ENST00000226247 ANKRD50Q9ULJ7 1429 aa13.36□□□□□ -0.27
FOXN1-201ENST00000226247 KDM5CP41229 1560 aa13.36□□□□□ -0.27
FOXN1-201ENST00000226247 POLR1AO95602 1720 aaPredicted RBP13.35□□□□□ -0.27
FOXN1-201ENST00000226247 PARD3Q8TEW0 1356 aa13.35□□□□□ -0.27
FOXN1-201ENST00000226247 KDM2BQ8NHM5 1336 aa13.34□□□□□ -0.27
FOXN1-201ENST00000226247 RAPGEF6Q8TEU7 1601 aa13.34□□□□□ -0.27
FOXN1-201ENST00000226247 MBD5Q9P267 1494 aa13.34□□□□□ -0.27
FOXN1-201ENST00000226247 BCAR3O75815 825 aa13.34□□□□□ -0.27
FOXN1-201ENST00000226247 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.34□□□□□ -0.27
FOXN1-201ENST00000226247 GOLGA2Q08379 1002 aa13.33□□□□□ -0.27
FOXN1-201ENST00000226247 DUSP27Q5VZP5 1158 aa13.33□□□□□ -0.28
FOXN1-201ENST00000226247 SEC24BO95487 1268 aa13.32□□□□□ -0.28
FOXN1-201ENST00000226247 CANXP27824 592 aaKnown RBP13.32□□□□□ -0.28
FOXN1-201ENST00000226247 KNSTRNQ9Y448 316 aa13.32□□□□□ -0.28
FOXN1-201ENST00000226247 RALGAPBQ86X10 1494 aa13.32□□□□□ -0.28
FOXN1-201ENST00000226247 DNMT1P26358 1616 aaKnown RBP13.31□□□□□ -0.28
FOXN1-201ENST00000226247 CAMSAP2Q08AD1 1489 aa13.31□□□□□ -0.28
FOXN1-201ENST00000226247 DISP3Q9P2K9 1392 aa13.3□□□□□ -0.28
FOXN1-201ENST00000226247 IGHDP01880 384 aa13.3□□□□□ -0.28
FOXN1-201ENST00000226247 TMF1P82094 1093 aa13.3□□□□□ -0.28
FOXN1-201ENST00000226247 PLEKHH1Q9ULM0 1364 aa13.3□□□□□ -0.28
FOXN1-201ENST00000226247 APAF1O14727 1248 aa13.29□□□□□ -0.28
FOXN1-201ENST00000226247 TROQ12816 1431 aaPredicted RBP13.29□□□□□ -0.28
FOXN1-201ENST00000226247 KIF14Q15058 1648 aa13.29□□□□□ -0.28
FOXN1-201ENST00000226247 NEUROD2Q15784 382 aa13.29□□□□□ -0.28
FOXN1-201ENST00000226247 SPINK5Q9NQ38 1064 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms