RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 ERBINQ96RT1 1412 aa21.85■■□□□ 1.09
SUPT4H1-201ENST00000225504 PPP6R1Q9UPN7 881 aa21.84■■□□□ 1.09
SUPT4H1-201ENST00000225504 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.83■■□□□ 1.095e-10■■■□□ 17.7
SUPT4H1-201ENST00000225504 EIF2AK4Q9P2K8 1649 aaKnown RBP21.83■■□□□ 1.09
SUPT4H1-201ENST00000225504 ANKRD50Q9ULJ7 1429 aa21.83■■□□□ 1.08
SUPT4H1-201ENST00000225504 CLTCQ00610 1675 aaKnown RBP21.82■■□□□ 1.08
SUPT4H1-201ENST00000225504 ZMYM3Q14202 1370 aa21.82■■□□□ 1.08
SUPT4H1-201ENST00000225504 WASHC2CQ9Y4E1 1318 aa21.82■■□□□ 1.08
SUPT4H1-201ENST00000225504 MROH1Q8NDA8 1641 aa21.81■■□□□ 1.08
SUPT4H1-201ENST00000225504 RNF17Q9BXT8 1623 aaKnown RBP21.81■■□□□ 1.08
SUPT4H1-201ENST00000225504 CNTLNQ9NXG0 1405 aa21.79■■□□□ 1.08
SUPT4H1-201ENST00000225504 C3P01024 1663 aa21.78■■□□□ 1.08
SUPT4H1-201ENST00000225504 NAIPQ13075 1403 aa21.75■■□□□ 1.07
SUPT4H1-201ENST00000225504 MROH2AA6NES4 1674 aa21.74■■□□□ 1.07
SUPT4H1-201ENST00000225504 KDM5DQ9BY66 1539 aa21.74■■□□□ 1.07
SUPT4H1-201ENST00000225504 DEPDC5O75140 1603 aa21.74■■□□□ 1.07
SUPT4H1-201ENST00000225504 ABCC3O15438 1527 aa21.73■■□□□ 1.07
SUPT4H1-201ENST00000225504 FBXO31Q5XUX0 539 aaPredicted RBP21.73■■□□□ 1.07
SUPT4H1-201ENST00000225504 PRDM15P57071 1507 aaPredicted RBP21.72■■□□□ 1.07
SUPT4H1-201ENST00000225504 CEP152O94986 1710 aa21.71■■□□□ 1.07
SUPT4H1-201ENST00000225504 HFM1A2PYH4 1435 aa21.69■■□□□ 1.06
SUPT4H1-201ENST00000225504 KANK1Q14678 1352 aa21.69■■□□□ 1.06
SUPT4H1-201ENST00000225504 FAM135AQ9P2D6 1515 aa21.68■■□□□ 1.06
SUPT4H1-201ENST00000225504 VWDEQ8N2E2 1590 aa21.68■■□□□ 1.06
SUPT4H1-201ENST00000225504 GCC2Q8IWJ2 1684 aa21.66■■□□□ 1.06
SUPT4H1-201ENST00000225504 ZC3H13Q5T200 1668 aaKnown RBP21.65■■□□□ 1.06
SUPT4H1-201ENST00000225504 UNC13BO14795 1591 aa21.65■■□□□ 1.06
SUPT4H1-201ENST00000225504 PZPP20742 1482 aa21.65■■□□□ 1.06
SUPT4H1-201ENST00000225504 CAMSAP1Q5T5Y3 1602 aa21.64■■□□□ 1.06
SUPT4H1-201ENST00000225504 NUP155O75694 1391 aa21.64■■□□□ 1.06
SUPT4H1-201ENST00000225504 SETD1BQ9UPS6 1966 aaKnown RBP21.64■■□□□ 1.05
SUPT4H1-201ENST00000225504 CFAP65Q6ZU64 1925 aaKnown RBP21.64■■□□□ 1.05
SUPT4H1-201ENST00000225504 NPATQ14207 1427 aa21.63■■□□□ 1.05
SUPT4H1-201ENST00000225504 LMTK3Q96Q04 1460 aa21.62■■□□□ 1.05
SUPT4H1-201ENST00000225504 LMTK2Q8IWU2 1503 aa21.62■■□□□ 1.05
SUPT4H1-201ENST00000225504 HSPA2P54652 639 aa21.61■■□□□ 1.05
SUPT4H1-201ENST00000225504 ARHGAP31Q2M1Z3 1444 aa21.59■■□□□ 1.05
SUPT4H1-201ENST00000225504 TRIM52Q96A61 297 aa21.59■■□□□ 1.05
SUPT4H1-201ENST00000225504 SETD5Q9C0A6 1442 aa21.58■■□□□ 1.04
SUPT4H1-201ENST00000225504 TNRQ92752 1358 aa21.58■■□□□ 1.04
SUPT4H1-201ENST00000225504 PREX1Q8TCU6 1659 aa21.58■■□□□ 1.04
SUPT4H1-201ENST00000225504 UHRF1BP1Q6BDS2 1440 aa21.57■■□□□ 1.04
SUPT4H1-201ENST00000225504 ERVK-7P63135 1459 aa21.56■■□□□ 1.04
SUPT4H1-201ENST00000225504 IQGAP3Q86VI3 1631 aa21.56■■□□□ 1.04
SUPT4H1-201ENST00000225504 EFCAB6Q5THR3 1501 aa21.55■■□□□ 1.04
SUPT4H1-201ENST00000225504 SPATA31D1Q6ZQQ2 1576 aa21.54■■□□□ 1.04
SUPT4H1-201ENST00000225504 TET3O43151 1660 aa21.54■■□□□ 1.04
SUPT4H1-201ENST00000225504 RAB3GAP2Q9H2M9 1393 aa21.52■■□□□ 1.04
SUPT4H1-201ENST00000225504 MYO3AQ8NEV4 1616 aa21.51■■□□□ 1.03
SUPT4H1-201ENST00000225504 E9PCH4 1651 aa21.5■■□□□ 1.03
SUPT4H1-201ENST00000225504 NOS1P29475 1434 aa21.49■■□□□ 1.03
SUPT4H1-201ENST00000225504 SLC4A1APQ9BWU0 796 aaKnown RBP21.48■■□□□ 1.03
SUPT4H1-201ENST00000225504 TRIM26Q12899 539 aaPredicted RBP21.47■■□□□ 1.03
SUPT4H1-201ENST00000225504 PKD2Q13563 968 aa21.47■■□□□ 1.03
SUPT4H1-201ENST00000225504 IDI1Q13907 227 aa21.47■■□□□ 1.03
SUPT4H1-201ENST00000225504 CEP170BQ9Y4F5 1589 aaPredicted RBP21.47■■□□□ 1.03
SUPT4H1-201ENST00000225504 A2ML1A8K2U0 1454 aa21.47■■□□□ 1.03
SUPT4H1-201ENST00000225504 RPRD2Q5VT52 1461 aaKnown RBP21.47■■□□□ 1.03
SUPT4H1-201ENST00000225504 SYNMO15061 1565 aa21.46■■□□□ 1.03
SUPT4H1-201ENST00000225504 NLRP1Q9C000 1473 aa21.45■■□□□ 1.02
SUPT4H1-201ENST00000225504 MPHOSPH9Q99550 1183 aa21.45■■□□□ 1.02
SUPT4H1-201ENST00000225504 FOXD1Q16676 465 aa21.44■■□□□ 1.02
SUPT4H1-201ENST00000225504 ZNF142P52746 1687 aaPredicted RBP21.44■■□□□ 1.02
SUPT4H1-201ENST00000225504 HRCP23327 699 aa21.4■■□□□ 1.02
SUPT4H1-201ENST00000225504 UGGT1Q9NYU2 1555 aa21.4■■□□□ 1.02
SUPT4H1-201ENST00000225504 THEMISQ8N1K5 641 aaPredicted RBP21.39■■□□□ 1.02
SUPT4H1-201ENST00000225504 SLC52A1Q9NWF4 448 aa21.39■■□□□ 1.02
SUPT4H1-201ENST00000225504 NCKAP5LQ9HCH0 1330 aa21.39■■□□□ 1.02
SUPT4H1-201ENST00000225504 PIK3C2BO00750 1634 aa21.39■■□□□ 1.01
SUPT4H1-201ENST00000225504 STRCQ7RTU9 1775 aa21.38■■□□□ 1.01
SUPT4H1-201ENST00000225504 PLA2R1Q13018 1463 aa21.38■■□□□ 1.01
SUPT4H1-201ENST00000225504 PTPRTO14522 1441 aa21.38■■□□□ 1.01
SUPT4H1-201ENST00000225504 STAG3Q9UJ98 1225 aa21.36■■□□□ 1.01
SUPT4H1-201ENST00000225504 UBR1Q8IWV7 1749 aa21.36■■□□□ 1.01
SUPT4H1-201ENST00000225504 ACIN1Q9UKV3 1341 aaKnown RBP21.35■■□□□ 1.01
SUPT4H1-201ENST00000225504 SPHKAPQ2M3C7 1700 aa21.34■■□□□ 1.01
SUPT4H1-201ENST00000225504 CHGAP10645 457 aaKnown RBP21.33■■□□□ 1.01
SUPT4H1-201ENST00000225504 ANKLE2Q86XL3 938 aa21.31■■□□□ 1
SUPT4H1-201ENST00000225504 LTKP29376 864 aa21.3■■□□□ 1
SUPT4H1-201ENST00000225504 TMEM131LA2VDJ0 1609 aa21.28■■□□□ 1
SUPT4H1-201ENST00000225504 MYO5BQ9ULV0 1848 aa21.28■■□□□ 1
SUPT4H1-201ENST00000225504 ADGRB3O60242 1522 aa21.28■■□□□ 1
SUPT4H1-201ENST00000225504 TRPM2O94759 1503 aa21.28■■□□□ 1
SUPT4H1-201ENST00000225504 CLTCL1P53675 1640 aa21.28■■□□□ 1
SUPT4H1-201ENST00000225504 TXNDC2Q86VQ3 553 aa21.27■■□□□ 1
SUPT4H1-201ENST00000225504 TMEM2Q9UHN6 1383 aa21.27■■□□□ 1
SUPT4H1-201ENST00000225504 ARHGAP23Q9P227 1491 aa21.27■□□□□ 0.99
SUPT4H1-201ENST00000225504 DMRT2Q9Y5R5 561 aa21.26■□□□□ 0.99
SUPT4H1-201ENST00000225504 KDM5AP29375 1690 aaKnown RBP21.25■□□□□ 0.99
SUPT4H1-201ENST00000225504 SLIT1O75093 1534 aa21.25■□□□□ 0.99
SUPT4H1-201ENST00000225504 PCGF6Q9BYE7 350 aa21.24■□□□□ 0.99
SUPT4H1-201ENST00000225504 NEURL4Q96JN8 1562 aa21.23■□□□□ 0.99
SUPT4H1-201ENST00000225504 NUTM2DQ5VT03 806 aaPredicted RBP21.23■□□□□ 0.99
SUPT4H1-201ENST00000225504 SENP3Q9H4L4 574 aaPredicted RBP21.22■□□□□ 0.99
SUPT4H1-201ENST00000225504 EID1Q9Y6B2 187 aa21.22■□□□□ 0.99
SUPT4H1-201ENST00000225504 POLR1AO95602 1720 aaPredicted RBP21.21■□□□□ 0.99
SUPT4H1-201ENST00000225504 SCAF11Q99590 1463 aaKnown RBP21.21■□□□□ 0.99
SUPT4H1-201ENST00000225504 ANKRD30BQ9BXX2 1392 aa21.2■□□□□ 0.98
SUPT4H1-201ENST00000225504 ZNF326Q5BKZ1 582 aaKnown RBP21.2■□□□□ 0.98
SUPT4H1-201ENST00000225504 NPHP4O75161 1426 aaPredicted RBP21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms