RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 RNF17Q9BXT8 1623 aaKnown RBP20.91■□□□□ 0.94
SEC61B-201ENST00000223641 KDM5DQ9BY66 1539 aa20.89■□□□□ 0.94
SEC61B-201ENST00000223641 MROH1Q8NDA8 1641 aa20.89■□□□□ 0.93
SEC61B-201ENST00000223641 KIF3BO15066 747 aa20.88■□□□□ 0.93
SEC61B-201ENST00000223641 PRDM15P57071 1507 aaPredicted RBP20.87■□□□□ 0.93
SEC61B-201ENST00000223641 VWDEQ8N2E2 1590 aa20.85■□□□□ 0.93
SEC61B-201ENST00000223641 IQGAP3Q86VI3 1631 aa20.84■□□□□ 0.93
SEC61B-201ENST00000223641 PZPP20742 1482 aa20.82■□□□□ 0.92
SEC61B-201ENST00000223641 NUP155O75694 1391 aa20.82■□□□□ 0.92
SEC61B-201ENST00000223641 TRIM52Q96A61 297 aa20.8■□□□□ 0.92
SEC61B-201ENST00000223641 DHX57Q6P158 1386 aaKnown RBP20.8■□□□□ 0.92
SEC61B-201ENST00000223641 FAM135AQ9P2D6 1515 aa20.79■□□□□ 0.92
SEC61B-201ENST00000223641 PPP6R1Q9UPN7 881 aa20.78■□□□□ 0.92
SEC61B-201ENST00000223641 LMTK2Q8IWU2 1503 aa20.78■□□□□ 0.92
SEC61B-201ENST00000223641 GGT6Q6P531 493 aa20.77■□□□□ 0.92
SEC61B-201ENST00000223641 MPHOSPH9Q99550 1183 aa20.77■□□□□ 0.92
SEC61B-201ENST00000223641 KANK1Q14678 1352 aa20.76■□□□□ 0.91
SEC61B-201ENST00000223641 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.76■□□□□ 0.912e-7■□□□□ 9.9
SEC61B-201ENST00000223641 ZC3H13Q5T200 1668 aaKnown RBP20.76■□□□□ 0.91
SEC61B-201ENST00000223641 TET3O43151 1660 aa20.74■□□□□ 0.91
SEC61B-201ENST00000223641 CEP152O94986 1710 aa20.74■□□□□ 0.91
SEC61B-201ENST00000223641 ABCC3O15438 1527 aa20.73■□□□□ 0.91
SEC61B-201ENST00000223641 SLC4A1APQ9BWU0 796 aaKnown RBP20.73■□□□□ 0.91
SEC61B-201ENST00000223641 ARID4BQ4LE39 1312 aaPredicted RBP20.71■□□□□ 0.91
SEC61B-201ENST00000223641 EFCAB6Q5THR3 1501 aa20.69■□□□□ 0.9
SEC61B-201ENST00000223641 E9PCH4 1651 aa20.69■□□□□ 0.9
SEC61B-201ENST00000223641 WASHC2CQ9Y4E1 1318 aa20.69■□□□□ 0.9
SEC61B-201ENST00000223641 CAMSAP1Q5T5Y3 1602 aa20.68■□□□□ 0.9
SEC61B-201ENST00000223641 PKD2Q13563 968 aa20.67■□□□□ 0.9
SEC61B-201ENST00000223641 CLSPNQ9HAW4 1339 aa20.67■□□□□ 0.9
SEC61B-201ENST00000223641 ARHGAP31Q2M1Z3 1444 aa20.67■□□□□ 0.9
SEC61B-201ENST00000223641 CLTCQ00610 1675 aaKnown RBP20.67■□□□□ 0.9
SEC61B-201ENST00000223641 MLECQ14165 292 aa20.66■□□□□ 0.9
SEC61B-201ENST00000223641 ADAMTSL3P82987 1691 aa20.65■□□□□ 0.9
SEC61B-201ENST00000223641 RPRD2Q5VT52 1461 aaKnown RBP20.65■□□□□ 0.9
SEC61B-201ENST00000223641 MROH2AA6NES4 1674 aa20.64■□□□□ 0.9
SEC61B-201ENST00000223641 CNTLNQ9NXG0 1405 aa20.64■□□□□ 0.89
SEC61B-201ENST00000223641 CCER1Q8TC90 406 aaPredicted RBP20.64■□□□□ 0.89
SEC61B-201ENST00000223641 FER1L4A9Z1Z3 1794 aa20.63■□□□□ 0.89
SEC61B-201ENST00000223641 NPATQ14207 1427 aa20.62■□□□□ 0.89
SEC61B-201ENST00000223641 ANKRD30BQ9BXX2 1392 aa20.62■□□□□ 0.89
SEC61B-201ENST00000223641 FOXD1Q16676 465 aa20.61■□□□□ 0.89
SEC61B-201ENST00000223641 PTPRTO14522 1441 aa20.61■□□□□ 0.89
SEC61B-201ENST00000223641 PLA2R1Q13018 1463 aa20.59■□□□□ 0.89
SEC61B-201ENST00000223641 MADDQ8WXG6 1647 aa20.59■□□□□ 0.89
SEC61B-201ENST00000223641 SPHKAPQ2M3C7 1700 aa20.58■□□□□ 0.89
SEC61B-201ENST00000223641 ZMYM3Q14202 1370 aa20.58■□□□□ 0.88
SEC61B-201ENST00000223641 ESF1Q9H501 851 aaKnown RBP20.57■□□□□ 0.88
SEC61B-201ENST00000223641 NOS1P29475 1434 aa20.56■□□□□ 0.88
SEC61B-201ENST00000223641 PREX1Q8TCU6 1659 aa20.56■□□□□ 0.88
SEC61B-201ENST00000223641 TRPM2O94759 1503 aa20.55■□□□□ 0.88
SEC61B-201ENST00000223641 CFAP65Q6ZU64 1925 aaKnown RBP20.55■□□□□ 0.88
SEC61B-201ENST00000223641 C3P01024 1663 aa20.54■□□□□ 0.88
SEC61B-201ENST00000223641 SPATA31D1Q6ZQQ2 1576 aa20.53■□□□□ 0.88
SEC61B-201ENST00000223641 RIMS1Q86UR5 1692 aaKnown RBP20.53■□□□□ 0.88
SEC61B-201ENST00000223641 ERVK-7P63135 1459 aa20.51■□□□□ 0.87
SEC61B-201ENST00000223641 SYNMO15061 1565 aa20.51■□□□□ 0.87
SEC61B-201ENST00000223641 PIK3C2BO00750 1634 aa20.49■□□□□ 0.87
SEC61B-201ENST00000223641 FBXO31Q5XUX0 539 aaPredicted RBP20.49■□□□□ 0.87
SEC61B-201ENST00000223641 SIN3AQ96ST3 1273 aa20.49■□□□□ 0.87
SEC61B-201ENST00000223641 CLTCL1P53675 1640 aa20.48■□□□□ 0.87
SEC61B-201ENST00000223641 CCDC144AA2RUR9 1427 aa20.47■□□□□ 0.87
SEC61B-201ENST00000223641 NEURL4Q96JN8 1562 aa20.44■□□□□ 0.86
SEC61B-201ENST00000223641 UGGT1Q9NYU2 1555 aa20.44■□□□□ 0.86
SEC61B-201ENST00000223641 CEBPAP49715 358 aaPredicted RBP20.44■□□□□ 0.86
SEC61B-201ENST00000223641 SLC52A1Q9NWF4 448 aa20.44■□□□□ 0.86
SEC61B-201ENST00000223641 PTPRMP28827 1452 aa20.43■□□□□ 0.86
SEC61B-201ENST00000223641 KDM4FA0A1W2PPD8 638 aa20.43■□□□□ 0.86
SEC61B-201ENST00000223641 KIF1BO60333 1816 aa20.41■□□□□ 0.86
SEC61B-201ENST00000223641 NEUROD1Q13562 356 aa20.4■□□□□ 0.86
SEC61B-201ENST00000223641 IDI1Q13907 227 aa20.4■□□□□ 0.86
SEC61B-201ENST00000223641 SPATA31E1Q6ZUB1 1445 aa20.4■□□□□ 0.86
SEC61B-201ENST00000223641 TNRQ92752 1358 aa20.4■□□□□ 0.86
SEC61B-201ENST00000223641 TIMELESSQ9UNS1 1208 aa20.4■□□□□ 0.86
SEC61B-201ENST00000223641 SETD1BQ9UPS6 1966 aaKnown RBP20.38■□□□□ 0.85
SEC61B-201ENST00000223641 KDM5AP29375 1690 aaKnown RBP20.37■□□□□ 0.85
SEC61B-201ENST00000223641 ADGRB3O60242 1522 aa20.37■□□□□ 0.85
SEC61B-201ENST00000223641 TMEM131LA2VDJ0 1609 aa20.36■□□□□ 0.85
SEC61B-201ENST00000223641 NLRP1Q9C000 1473 aa20.36■□□□□ 0.85
SEC61B-201ENST00000223641 ZEB1P37275 1124 aaPredicted RBP20.33■□□□□ 0.85
SEC61B-201ENST00000223641 MYO3AQ8NEV4 1616 aa20.33■□□□□ 0.84
SEC61B-201ENST00000223641 TONSLQ96HA7 1378 aa20.32■□□□□ 0.84
SEC61B-201ENST00000223641 MYO5BQ9ULV0 1848 aa20.32■□□□□ 0.84
SEC61B-201ENST00000223641 UBR1Q8IWV7 1749 aa20.3■□□□□ 0.84
SEC61B-201ENST00000223641 L3MBTL2Q969R5 705 aa20.3■□□□□ 0.84
SEC61B-201ENST00000223641 IFT172Q9UG01 1749 aa20.29■□□□□ 0.84
SEC61B-201ENST00000223641 A2ML1A8K2U0 1454 aa20.29■□□□□ 0.84
SEC61B-201ENST00000223641 ZNF142P52746 1687 aaPredicted RBP20.29■□□□□ 0.84
SEC61B-201ENST00000223641 PLPPR3Q6T4P5 718 aa20.28■□□□□ 0.84
SEC61B-201ENST00000223641 RGL3Q3MIN7 710 aa20.27■□□□□ 0.84
SEC61B-201ENST00000223641 CEP170BQ9Y4F5 1589 aaPredicted RBP20.26■□□□□ 0.83
SEC61B-201ENST00000223641 PPLO60437 1756 aa20.26■□□□□ 0.83
SEC61B-201ENST00000223641 RPGRIP1LQ68CZ1 1315 aa20.26■□□□□ 0.83
SEC61B-201ENST00000223641 PPP1R15AO75807 674 aaPredicted RBP20.25■□□□□ 0.83
SEC61B-201ENST00000223641 STAC3Q96MF2 364 aa20.25■□□□□ 0.83
SEC61B-201ENST00000223641 NEXMIFQ5QGS0 1516 aa20.24■□□□□ 0.83
SEC61B-201ENST00000223641 CHGAP10645 457 aaKnown RBP20.24■□□□□ 0.83
SEC61B-201ENST00000223641 UHRF1BP1Q6BDS2 1440 aa20.21■□□□□ 0.83
SEC61B-201ENST00000223641 DCAF11Q8TEB1 546 aa20.21■□□□□ 0.83
SEC61B-201ENST00000223641 STAG3Q9UJ98 1225 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms