RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 CLTCQ00610 1675 aaKnown RBP19.43■□□□□ 0.7
LSM5-201ENST00000223084 C3P01024 1663 aa19.42■□□□□ 0.7
LSM5-201ENST00000223084 NCOA1Q15788 1441 aa19.42■□□□□ 0.7
LSM5-201ENST00000223084 ZMYM3Q14202 1370 aa19.41■□□□□ 0.7
LSM5-201ENST00000223084 PPP6R1Q9UPN7 881 aa19.4■□□□□ 0.7
LSM5-201ENST00000223084 ADGRL2O95490 1459 aa19.4■□□□□ 0.7
LSM5-201ENST00000223084 RRBP1Q9P2E9 1410 aaKnown RBP19.39■□□□□ 0.69
LSM5-201ENST00000223084 MROH2AA6NES4 1674 aa19.38■□□□□ 0.69
LSM5-201ENST00000223084 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.38■□□□□ 0.69
LSM5-201ENST00000223084 EIF2AK4Q9P2K8 1649 aaKnown RBP19.38■□□□□ 0.69
LSM5-201ENST00000223084 WASHC2CQ9Y4E1 1318 aa19.37■□□□□ 0.69
LSM5-201ENST00000223084 RNF17Q9BXT8 1623 aaKnown RBP19.36■□□□□ 0.69
LSM5-201ENST00000223084 ERBINQ96RT1 1412 aa19.36■□□□□ 0.69
LSM5-201ENST00000223084 SETD1BQ9UPS6 1966 aaKnown RBP19.35■□□□□ 0.69
LSM5-201ENST00000223084 LMTK3Q96Q04 1460 aa19.35■□□□□ 0.69
LSM5-201ENST00000223084 MROH1Q8NDA8 1641 aa19.34■□□□□ 0.69
LSM5-201ENST00000223084 KDM5DQ9BY66 1539 aa19.34■□□□□ 0.69
LSM5-201ENST00000223084 HSPA2P54652 639 aa19.33■□□□□ 0.68
LSM5-201ENST00000223084 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.33■□□□□ 0.683e-13■■■□□ 16
LSM5-201ENST00000223084 ROCK1Q13464 1354 aa19.31■□□□□ 0.68
LSM5-201ENST00000223084 ABCC3O15438 1527 aa19.3■□□□□ 0.68
LSM5-201ENST00000223084 FBXO31Q5XUX0 539 aaPredicted RBP19.3■□□□□ 0.68
LSM5-201ENST00000223084 ANKRD50Q9ULJ7 1429 aa19.3■□□□□ 0.68
LSM5-201ENST00000223084 PREX1Q8TCU6 1659 aa19.3■□□□□ 0.68
LSM5-201ENST00000223084 FAM135AQ9P2D6 1515 aa19.29■□□□□ 0.68
LSM5-201ENST00000223084 CEP152O94986 1710 aa19.28■□□□□ 0.68
LSM5-201ENST00000223084 NPATQ14207 1427 aa19.28■□□□□ 0.68
LSM5-201ENST00000223084 UHRF1BP1Q6BDS2 1440 aa19.28■□□□□ 0.68
LSM5-201ENST00000223084 DEPDC5O75140 1603 aa19.27■□□□□ 0.68
LSM5-201ENST00000223084 PRDM15P57071 1507 aaPredicted RBP19.26■□□□□ 0.67
LSM5-201ENST00000223084 ZC3H13Q5T200 1668 aaKnown RBP19.25■□□□□ 0.67
LSM5-201ENST00000223084 PZPP20742 1482 aa19.25■□□□□ 0.67
LSM5-201ENST00000223084 CFAP65Q6ZU64 1925 aaKnown RBP19.25■□□□□ 0.67
LSM5-201ENST00000223084 KANK1Q14678 1352 aa19.24■□□□□ 0.67
LSM5-201ENST00000223084 CAMSAP1Q5T5Y3 1602 aa19.22■□□□□ 0.67
LSM5-201ENST00000223084 TNRQ92752 1358 aa19.21■□□□□ 0.67
LSM5-201ENST00000223084 VWDEQ8N2E2 1590 aa19.2■□□□□ 0.66
LSM5-201ENST00000223084 MYO3AQ8NEV4 1616 aa19.2■□□□□ 0.66
LSM5-201ENST00000223084 ERVK-7P63135 1459 aa19.17■□□□□ 0.66
LSM5-201ENST00000223084 NAIPQ13075 1403 aa19.17■□□□□ 0.66
LSM5-201ENST00000223084 LMTK2Q8IWU2 1503 aa19.16■□□□□ 0.66
LSM5-201ENST00000223084 ARHGAP31Q2M1Z3 1444 aa19.16■□□□□ 0.66
LSM5-201ENST00000223084 UNC13BO14795 1591 aa19.15■□□□□ 0.66
LSM5-201ENST00000223084 CEP170BQ9Y4F5 1589 aaPredicted RBP19.15■□□□□ 0.66
LSM5-201ENST00000223084 SPATA31D1Q6ZQQ2 1576 aa19.15■□□□□ 0.66
LSM5-201ENST00000223084 ZNF142P52746 1687 aaPredicted RBP19.14■□□□□ 0.65
LSM5-201ENST00000223084 SOCS7O14512 581 aa19.13■□□□□ 0.65
LSM5-201ENST00000223084 A2ML1A8K2U0 1454 aa19.13■□□□□ 0.65
LSM5-201ENST00000223084 GCC2Q8IWJ2 1684 aa19.12■□□□□ 0.65
LSM5-201ENST00000223084 HFM1A2PYH4 1435 aa19.12■□□□□ 0.65
LSM5-201ENST00000223084 NUP155O75694 1391 aa19.12■□□□□ 0.65
LSM5-201ENST00000223084 STRCQ7RTU9 1775 aa19.11■□□□□ 0.65
LSM5-201ENST00000223084 EFCAB6Q5THR3 1501 aa19.11■□□□□ 0.65
LSM5-201ENST00000223084 NLRP1Q9C000 1473 aa19.09■□□□□ 0.65
LSM5-201ENST00000223084 TET3O43151 1660 aa19.09■□□□□ 0.65
LSM5-201ENST00000223084 IQGAP3Q86VI3 1631 aa19.08■□□□□ 0.65
LSM5-201ENST00000223084 NCKAP5LQ9HCH0 1330 aa19.08■□□□□ 0.65
LSM5-201ENST00000223084 UGGT1Q9NYU2 1555 aa19.06■□□□□ 0.64
LSM5-201ENST00000223084 TRIM52Q96A61 297 aa19.05■□□□□ 0.64
LSM5-201ENST00000223084 NOS1P29475 1434 aa19.05■□□□□ 0.64
LSM5-201ENST00000223084 SYNMO15061 1565 aa19.05■□□□□ 0.64
LSM5-201ENST00000223084 ILDR2Q71H61 639 aa19.04■□□□□ 0.64
LSM5-201ENST00000223084 E9PCH4 1651 aa19.04■□□□□ 0.64
LSM5-201ENST00000223084 PLA2R1Q13018 1463 aa19.03■□□□□ 0.64
LSM5-201ENST00000223084 RPRD2Q5VT52 1461 aaKnown RBP19.03■□□□□ 0.64
LSM5-201ENST00000223084 IDI1Q13907 227 aa19.03■□□□□ 0.64
LSM5-201ENST00000223084 THEMISQ8N1K5 641 aaPredicted RBP19.03■□□□□ 0.64
LSM5-201ENST00000223084 DISP3Q9P2K9 1392 aa19.03■□□□□ 0.64
LSM5-201ENST00000223084 DMRT2Q9Y5R5 561 aa19.01■□□□□ 0.63
LSM5-201ENST00000223084 PIK3C2BO00750 1634 aa19■□□□□ 0.63
LSM5-201ENST00000223084 UBR1Q8IWV7 1749 aa19■□□□□ 0.63
LSM5-201ENST00000223084 PKD2Q13563 968 aa19■□□□□ 0.63
LSM5-201ENST00000223084 STAG3Q9UJ98 1225 aa18.99■□□□□ 0.63
LSM5-201ENST00000223084 PTPRTO14522 1441 aa18.99■□□□□ 0.63
LSM5-201ENST00000223084 ANKLE2Q86XL3 938 aa18.97■□□□□ 0.63
LSM5-201ENST00000223084 SLC52A1Q9NWF4 448 aa18.97■□□□□ 0.63
LSM5-201ENST00000223084 SETD5Q9C0A6 1442 aa18.97■□□□□ 0.63
LSM5-201ENST00000223084 POLR1AO95602 1720 aaPredicted RBP18.94■□□□□ 0.62
LSM5-201ENST00000223084 NEURL4Q96JN8 1562 aa18.94■□□□□ 0.62
LSM5-201ENST00000223084 SLC4A1APQ9BWU0 796 aaKnown RBP18.94■□□□□ 0.62
LSM5-201ENST00000223084 CHGAP10645 457 aaKnown RBP18.92■□□□□ 0.62
LSM5-201ENST00000223084 LTKP29376 864 aa18.92■□□□□ 0.62
LSM5-201ENST00000223084 RAB3GAP2Q9H2M9 1393 aa18.92■□□□□ 0.62
LSM5-201ENST00000223084 MYO5BQ9ULV0 1848 aa18.91■□□□□ 0.62
LSM5-201ENST00000223084 ADGRB3O60242 1522 aa18.91■□□□□ 0.62
LSM5-201ENST00000223084 TXNDC2Q86VQ3 553 aa18.91■□□□□ 0.62
LSM5-201ENST00000223084 TMEM2Q9UHN6 1383 aa18.91■□□□□ 0.62
LSM5-201ENST00000223084 SPHKAPQ2M3C7 1700 aa18.91■□□□□ 0.62
LSM5-201ENST00000223084 ARHGAP23Q9P227 1491 aa18.9■□□□□ 0.62
LSM5-201ENST00000223084 SLIT1O75093 1534 aa18.9■□□□□ 0.62
LSM5-201ENST00000223084 FOXD1Q16676 465 aa18.9■□□□□ 0.62
LSM5-201ENST00000223084 NPHP4O75161 1426 aaPredicted RBP18.9■□□□□ 0.62
LSM5-201ENST00000223084 KDM5AP29375 1690 aaKnown RBP18.89■□□□□ 0.61
LSM5-201ENST00000223084 MPHOSPH9Q99550 1183 aa18.89■□□□□ 0.61
LSM5-201ENST00000223084 SCAF11Q99590 1463 aaKnown RBP18.88■□□□□ 0.61
LSM5-201ENST00000223084 TMEM131LA2VDJ0 1609 aa18.88■□□□□ 0.61
LSM5-201ENST00000223084 MED14O60244 1454 aa18.87■□□□□ 0.61
LSM5-201ENST00000223084 ZNF335Q9H4Z2 1342 aaPredicted RBP18.87■□□□□ 0.61
LSM5-201ENST00000223084 EID1Q9Y6B2 187 aa18.87■□□□□ 0.61
LSM5-201ENST00000223084 IQGAP1P46940 1657 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms