RNA–Protein interactions for RNA: ENST00000222275.2

UPK1A-201, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK1A, Length 1,223 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-201ENST00000222275 CHIC2Q9UKJ5 165 aa20.94■□□□□ 0.94
UPK1A-201ENST00000222275 PTPN23Q9H3S7 1636 aa20.93■□□□□ 0.94
UPK1A-201ENST00000222275 PPARGC1BQ86YN6 1023 aaKnown RBP20.92■□□□□ 0.94
UPK1A-201ENST00000222275 CERKQ8TCT0 537 aa20.92■□□□□ 0.94
UPK1A-201ENST00000222275 NCOA1Q15788 1441 aa20.92■□□□□ 0.94
UPK1A-201ENST00000222275 TCOF1Q13428 1488 aaKnown RBP20.92■□□□□ 0.94
UPK1A-201ENST00000222275 DMRT2Q9Y5R5 561 aa20.9■□□□□ 0.94
UPK1A-201ENST00000222275 DAPK1P53355 1430 aa20.89■□□□□ 0.94
UPK1A-201ENST00000222275 KIF15Q9NS87 1388 aa20.88■□□□□ 0.93
UPK1A-201ENST00000222275 CAMSAP1Q5T5Y3 1602 aa20.88■□□□□ 0.93
UPK1A-201ENST00000222275 PTPRTO14522 1441 aa20.87■□□□□ 0.93
UPK1A-201ENST00000222275 TNRQ92752 1358 aa20.86■□□□□ 0.93
UPK1A-201ENST00000222275 KDM5DQ9BY66 1539 aa20.86■□□□□ 0.93
UPK1A-201ENST00000222275 PZPP20742 1482 aa20.86■□□□□ 0.93
UPK1A-201ENST00000222275 MROH1Q8NDA8 1641 aa20.86■□□□□ 0.93
UPK1A-201ENST00000222275 FAM50AQ14320 339 aaKnown RBP20.85■□□□□ 0.93
UPK1A-201ENST00000222275 ABCC3O15438 1527 aa20.83■□□□□ 0.93
UPK1A-201ENST00000222275 DUOX2Q9NRD8 1548 aa20.83■□□□□ 0.93
UPK1A-201ENST00000222275 SHANK2Q9UPX8 1470 aa20.83■□□□□ 0.93
UPK1A-201ENST00000222275 MYO3AQ8NEV4 1616 aa20.83■□□□□ 0.93
UPK1A-201ENST00000222275 CEP170BQ9Y4F5 1589 aaPredicted RBP20.83■□□□□ 0.92
UPK1A-201ENST00000222275 RNF17Q9BXT8 1623 aaKnown RBP20.82■□□□□ 0.92
UPK1A-201ENST00000222275 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.82■□□□□ 0.92
UPK1A-201ENST00000222275 DNMT1P26358 1616 aaKnown RBP20.82■□□□□ 0.92
UPK1A-201ENST00000222275 A2ML1A8K2U0 1454 aa20.81■□□□□ 0.92
UPK1A-201ENST00000222275 CROCC2H7BZ55 1655 aa20.78■□□□□ 0.92
UPK1A-201ENST00000222275 PKD2Q13563 968 aa20.78■□□□□ 0.92
UPK1A-201ENST00000222275 FAM135AQ9P2D6 1515 aa20.78■□□□□ 0.92
UPK1A-201ENST00000222275 ZNF142P52746 1687 aaPredicted RBP20.77■□□□□ 0.92
UPK1A-201ENST00000222275 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.77■□□□□ 0.92
UPK1A-201ENST00000222275 LTBP4Q8N2S1 1624 aa20.77■□□□□ 0.92
UPK1A-201ENST00000222275 ZNF335Q9H4Z2 1342 aaPredicted RBP20.77■□□□□ 0.91
UPK1A-201ENST00000222275 PLA2R1Q13018 1463 aa20.76■□□□□ 0.91
UPK1A-201ENST00000222275 ANKRD30AQ9BXX3 1397 aa20.76■□□□□ 0.91
UPK1A-201ENST00000222275 EIF2AK4Q9P2K8 1649 aaKnown RBP20.76■□□□□ 0.91
UPK1A-201ENST00000222275 ERBINQ96RT1 1412 aa20.76■□□□□ 0.91
UPK1A-201ENST00000222275 CFAP65Q6ZU64 1925 aaKnown RBP20.74■□□□□ 0.91
UPK1A-201ENST00000222275 ERVK-7P63135 1459 aa20.74■□□□□ 0.91
UPK1A-201ENST00000222275 RRBP1Q9P2E9 1410 aaKnown RBP20.73■□□□□ 0.91
UPK1A-201ENST00000222275 THEMISQ8N1K5 641 aaPredicted RBP20.72■□□□□ 0.91
UPK1A-201ENST00000222275 ADGRL2O95490 1459 aa20.72■□□□□ 0.91
UPK1A-201ENST00000222275 CEP152O94986 1710 aa20.71■□□□□ 0.91
UPK1A-201ENST00000222275 SPATA31D1Q6ZQQ2 1576 aa20.71■□□□□ 0.91
UPK1A-201ENST00000222275 NLRP1Q9C000 1473 aa20.69■□□□□ 0.9
UPK1A-201ENST00000222275 PRDM15P57071 1507 aaPredicted RBP20.69■□□□□ 0.9
UPK1A-201ENST00000222275 ANKLE2Q86XL3 938 aa20.69■□□□□ 0.9
UPK1A-201ENST00000222275 ARHGAP31Q2M1Z3 1444 aa20.69■□□□□ 0.9
UPK1A-201ENST00000222275 ITGAEP38570 1179 aa20.67■□□□□ 0.9
UPK1A-201ENST00000222275 NEURL4Q96JN8 1562 aa20.67■□□□□ 0.9
UPK1A-201ENST00000222275 UGGT1Q9NYU2 1555 aa20.67■□□□□ 0.9
UPK1A-201ENST00000222275 LTKP29376 864 aa20.66■□□□□ 0.9
UPK1A-201ENST00000222275 VWDEQ8N2E2 1590 aa20.66■□□□□ 0.9
UPK1A-201ENST00000222275 DEPDC5O75140 1603 aa20.66■□□□□ 0.9
UPK1A-201ENST00000222275 ZC3H13Q5T200 1668 aaKnown RBP20.65■□□□□ 0.9
UPK1A-201ENST00000222275 ANKRD50Q9ULJ7 1429 aa20.65■□□□□ 0.9
UPK1A-201ENST00000222275 IDI1Q13907 227 aa20.65■□□□□ 0.9
UPK1A-201ENST00000222275 LMTK2Q8IWU2 1503 aa20.62■□□□□ 0.89
UPK1A-201ENST00000222275 KANK1Q14678 1352 aa20.61■□□□□ 0.89
UPK1A-201ENST00000222275 MED14O60244 1454 aa20.59■□□□□ 0.89
UPK1A-201ENST00000222275 NPHP4O75161 1426 aaPredicted RBP20.59■□□□□ 0.89
UPK1A-201ENST00000222275 ROCK1Q13464 1354 aa20.59■□□□□ 0.89
UPK1A-201ENST00000222275 NOS1P29475 1434 aa20.58■□□□□ 0.88
UPK1A-201ENST00000222275 TXNDC2Q86VQ3 553 aa20.57■□□□□ 0.88
UPK1A-201ENST00000222275 UBR1Q8IWV7 1749 aa20.55■□□□□ 0.88
UPK1A-201ENST00000222275 ARHGAP23Q9P227 1491 aa20.55■□□□□ 0.88
UPK1A-201ENST00000222275 SYNMO15061 1565 aa20.54■□□□□ 0.88
UPK1A-201ENST00000222275 POLR1AO95602 1720 aaPredicted RBP20.53■□□□□ 0.88
UPK1A-201ENST00000222275 EFCAB6Q5THR3 1501 aa20.52■□□□□ 0.87
UPK1A-201ENST00000222275 IQSEC2Q5JU85 1478 aa20.51■□□□□ 0.87
UPK1A-201ENST00000222275 TMEM2Q9UHN6 1383 aa20.51■□□□□ 0.87
UPK1A-201ENST00000222275 UBAP1LF5GYI3 381 aa20.51■□□□□ 0.87
UPK1A-201ENST00000222275 PIK3C2BO00750 1634 aa20.51■□□□□ 0.87
UPK1A-201ENST00000222275 SLIT1O75093 1534 aa20.5■□□□□ 0.87
UPK1A-201ENST00000222275 STAG3Q9UJ98 1225 aa20.49■□□□□ 0.87
UPK1A-201ENST00000222275 SCAF11Q99590 1463 aaKnown RBP20.49■□□□□ 0.87
UPK1A-201ENST00000222275 SLC52A1Q9NWF4 448 aa20.48■□□□□ 0.87
UPK1A-201ENST00000222275 NUP155O75694 1391 aa20.47■□□□□ 0.87
UPK1A-201ENST00000222275 SENP3Q9H4L4 574 aaPredicted RBP20.47■□□□□ 0.87
UPK1A-201ENST00000222275 STRCP1A6NGW2 1772 aa20.46■□□□□ 0.87
UPK1A-201ENST00000222275 IQGAP1P46940 1657 aa20.45■□□□□ 0.86
UPK1A-201ENST00000222275 EID1Q9Y6B2 187 aa20.45■□□□□ 0.86
UPK1A-201ENST00000222275 UNC13BO14795 1591 aa20.45■□□□□ 0.86
UPK1A-201ENST00000222275 SLC26A8Q96RN1 970 aa20.43■□□□□ 0.86
UPK1A-201ENST00000222275 RPRD2Q5VT52 1461 aaKnown RBP20.43■□□□□ 0.86
UPK1A-201ENST00000222275 CPS1P31327 1500 aa20.42■□□□□ 0.86
UPK1A-201ENST00000222275 TET3O43151 1660 aa20.42■□□□□ 0.86
UPK1A-201ENST00000222275 LRRC7Q96NW7 1537 aa20.41■□□□□ 0.86
UPK1A-201ENST00000222275 PIP4K2BP78356 416 aa20.4■□□□□ 0.86
UPK1A-201ENST00000222275 TRIM26Q12899 539 aaPredicted RBP20.4■□□□□ 0.86
UPK1A-201ENST00000222275 NAIPQ13075 1403 aa20.4■□□□□ 0.86
UPK1A-201ENST00000222275 ACIN1Q9UKV3 1341 aaKnown RBP20.4■□□□□ 0.86
UPK1A-201ENST00000222275 E9PCH4 1651 aa20.39■□□□□ 0.86
UPK1A-201ENST00000222275 ALKQ9UM73 1620 aa20.39■□□□□ 0.86
UPK1A-201ENST00000222275 HFM1A2PYH4 1435 aa20.39■□□□□ 0.85
UPK1A-201ENST00000222275 NUTM2DQ5VT03 806 aaPredicted RBP20.39■□□□□ 0.85
UPK1A-201ENST00000222275 IQGAP3Q86VI3 1631 aa20.38■□□□□ 0.85
UPK1A-201ENST00000222275 ADGRB3O60242 1522 aa20.37■□□□□ 0.85
UPK1A-201ENST00000222275 ZFYVE9O95405 1425 aa20.37■□□□□ 0.85
UPK1A-201ENST00000222275 CHGAP10645 457 aaKnown RBP20.37■□□□□ 0.85
UPK1A-201ENST00000222275 RBM33Q96EV2 1170 aaKnown RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms