RNA–Protein interactions for RNA: ENST00000222256.8

RAB3A-201, Transcript of RAB3A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3A, Length 1,528 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3A-201ENST00000222256 HRCP23327 699 aa32.11■■■□□ 2.73
RAB3A-201ENST00000222256 GGT6Q6P531 493 aa32.1■■■□□ 2.73
RAB3A-201ENST00000222256 UNC13BO14795 1591 aa32.1■■■□□ 2.73
RAB3A-201ENST00000222256 ACIN1Q9UKV3 1341 aaKnown RBP32.09■■■□□ 2.73
RAB3A-201ENST00000222256 MROH1Q8NDA8 1641 aa32.08■■■□□ 2.73
RAB3A-201ENST00000222256 PRDM15P57071 1507 aaPredicted RBP32.08■■■□□ 2.73
RAB3A-201ENST00000222256 MLECQ14165 292 aa32.06■■■□□ 2.72
RAB3A-201ENST00000222256 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.05■■■□□ 2.72
RAB3A-201ENST00000222256 PPP6R1Q9UPN7 881 aa32.04■■■□□ 2.72
RAB3A-201ENST00000222256 KANK1Q14678 1352 aa32.03■■■□□ 2.72
RAB3A-201ENST00000222256 NUP155O75694 1391 aa32.01■■■□□ 2.71
RAB3A-201ENST00000222256 TRIM52Q96A61 297 aa32■■■□□ 2.71
RAB3A-201ENST00000222256 FAM135AQ9P2D6 1515 aa31.99■■■□□ 2.71
RAB3A-201ENST00000222256 VWDEQ8N2E2 1590 aa31.99■■■□□ 2.71
RAB3A-201ENST00000222256 KDM5DQ9BY66 1539 aa31.99■■■□□ 2.71
RAB3A-201ENST00000222256 IQGAP3Q86VI3 1631 aa31.97■■■□□ 2.71
RAB3A-201ENST00000222256 WASHC2CQ9Y4E1 1318 aa31.96■■■□□ 2.71
RAB3A-201ENST00000222256 ZC3H13Q5T200 1668 aaKnown RBP31.95■■■□□ 2.71
RAB3A-201ENST00000222256 ADAMTSL3P82987 1691 aa31.95■■■□□ 2.7
RAB3A-201ENST00000222256 ABCC3O15438 1527 aa31.94■■■□□ 2.7
RAB3A-201ENST00000222256 ESF1Q9H501 851 aaKnown RBP31.93■■■□□ 2.7
RAB3A-201ENST00000222256 FER1L4A9Z1Z3 1794 aa31.93■■■□□ 2.7
RAB3A-201ENST00000222256 CEP152O94986 1710 aa31.92■■■□□ 2.7
RAB3A-201ENST00000222256 LMTK2Q8IWU2 1503 aa31.92■■■□□ 2.7
RAB3A-201ENST00000222256 CNTLNQ9NXG0 1405 aa31.9■■■□□ 2.7
RAB3A-201ENST00000222256 CLTCQ00610 1675 aaKnown RBP31.9■■■□□ 2.7
RAB3A-201ENST00000222256 PZPP20742 1482 aa31.89■■■□□ 2.7
RAB3A-201ENST00000222256 MADDQ8WXG6 1647 aa31.88■■■□□ 2.69
RAB3A-201ENST00000222256 TET3O43151 1660 aa31.87■■■□□ 2.69
RAB3A-201ENST00000222256 SLC4A1APQ9BWU0 796 aaKnown RBP31.85■■■□□ 2.69
RAB3A-201ENST00000222256 CAMSAP1Q5T5Y3 1602 aa31.85■■■□□ 2.69
RAB3A-201ENST00000222256 MROH2AA6NES4 1674 aa31.84■■■□□ 2.69
RAB3A-201ENST00000222256 MPHOSPH9Q99550 1183 aa31.84■■■□□ 2.69
RAB3A-201ENST00000222256 EFCAB6Q5THR3 1501 aa31.82■■■□□ 2.68
RAB3A-201ENST00000222256 RIMS1Q86UR5 1692 aaKnown RBP31.81■■■□□ 2.68
RAB3A-201ENST00000222256 ZMYM3Q14202 1370 aa31.79■■■□□ 2.68
RAB3A-201ENST00000222256 ARHGAP31Q2M1Z3 1444 aa31.79■■■□□ 2.68
RAB3A-201ENST00000222256 E9PCH4 1651 aa31.76■■■□□ 2.68
RAB3A-201ENST00000222256 PKD2Q13563 968 aa31.76■■■□□ 2.68
RAB3A-201ENST00000222256 RPRD2Q5VT52 1461 aaKnown RBP31.75■■■□□ 2.67
RAB3A-201ENST00000222256 NPATQ14207 1427 aa31.75■■■□□ 2.67
RAB3A-201ENST00000222256 KDM4FA0A1W2PPD8 638 aa31.75■■■□□ 2.67
RAB3A-201ENST00000222256 C3P01024 1663 aa31.73■■■□□ 2.67
RAB3A-201ENST00000222256 DHX57Q6P158 1386 aaKnown RBP31.72■■■□□ 2.67
RAB3A-201ENST00000222256 CFAP65Q6ZU64 1925 aaKnown RBP31.7■■■□□ 2.66
RAB3A-201ENST00000222256 PTPRMP28827 1452 aa31.68■■■□□ 2.66
RAB3A-201ENST00000222256 CEBPAP49715 358 aaPredicted RBP31.66■■■□□ 2.66
RAB3A-201ENST00000222256 FOXD1Q16676 465 aa31.65■■■□□ 2.66
RAB3A-201ENST00000222256 PREX1Q8TCU6 1659 aa31.64■■■□□ 2.66
RAB3A-201ENST00000222256 FBXO31Q5XUX0 539 aaPredicted RBP31.63■■■□□ 2.65
RAB3A-201ENST00000222256 ERVK-7P63135 1459 aa31.63■■■□□ 2.65
RAB3A-201ENST00000222256 SPHKAPQ2M3C7 1700 aa31.61■■■□□ 2.65
RAB3A-201ENST00000222256 SPATA31D1Q6ZQQ2 1576 aa31.61■■■□□ 2.65
RAB3A-201ENST00000222256 NOS1P29475 1434 aa31.61■■■□□ 2.65
RAB3A-201ENST00000222256 PTPRTO14522 1441 aa31.61■■■□□ 2.65
RAB3A-201ENST00000222256 PLPPR3Q6T4P5 718 aa31.59■■■□□ 2.65
RAB3A-201ENST00000222256 PLA2R1Q13018 1463 aa31.57■■■□□ 2.64
RAB3A-201ENST00000222256 TRPM2O94759 1503 aa31.55■■■□□ 2.64
RAB3A-201ENST00000222256 ANKRD30BQ9BXX2 1392 aa31.55■■■□□ 2.64
RAB3A-201ENST00000222256 SYNMO15061 1565 aa31.54■■■□□ 2.64
RAB3A-201ENST00000222256 TNRQ92752 1358 aa31.53■■■□□ 2.64
RAB3A-201ENST00000222256 SETD1BQ9UPS6 1966 aaKnown RBP31.53■■■□□ 2.64
RAB3A-201ENST00000222256 CCER1Q8TC90 406 aaPredicted RBP31.5■■■□□ 2.63
RAB3A-201ENST00000222256 SLC52A1Q9NWF4 448 aa31.49■■■□□ 2.63
RAB3A-201ENST00000222256 PIK3C2BO00750 1634 aa31.47■■■□□ 2.63
RAB3A-201ENST00000222256 CCDC144AA2RUR9 1427 aa31.46■■■□□ 2.63
RAB3A-201ENST00000222256 CLSPNQ9HAW4 1339 aa31.45■■■□□ 2.62
RAB3A-201ENST00000222256 UGGT1Q9NYU2 1555 aa31.44■■■□□ 2.62
RAB3A-201ENST00000222256 CLTCL1P53675 1640 aa31.44■■■□□ 2.62
RAB3A-201ENST00000222256 NLRP1Q9C000 1473 aa31.43■■■□□ 2.62
RAB3A-201ENST00000222256 IDI1Q13907 227 aa31.42■■■□□ 2.62
RAB3A-201ENST00000222256 MYO3AQ8NEV4 1616 aa31.42■■■□□ 2.62
RAB3A-201ENST00000222256 KIF1BO60333 1816 aa31.36■■■□□ 2.61
RAB3A-201ENST00000222256 SIN3AQ96ST3 1273 aa31.34■■■□□ 2.61
RAB3A-201ENST00000222256 UHRF1BP1Q6BDS2 1440 aa31.34■■■□□ 2.61
RAB3A-201ENST00000222256 A2ML1A8K2U0 1454 aa31.34■■■□□ 2.61
RAB3A-201ENST00000222256 ZNF142P52746 1687 aaPredicted RBP31.32■■■□□ 2.61
RAB3A-201ENST00000222256 CEP170BQ9Y4F5 1589 aaPredicted RBP31.32■■■□□ 2.6
RAB3A-201ENST00000222256 KDM5AP29375 1690 aaKnown RBP31.32■■■□□ 2.6
RAB3A-201ENST00000222256 ADGRB3O60242 1522 aa31.31■■■□□ 2.6
RAB3A-201ENST00000222256 TMEM131LA2VDJ0 1609 aa31.3■■■□□ 2.6
RAB3A-201ENST00000222256 STAG3Q9UJ98 1225 aa31.29■■■□□ 2.6
RAB3A-201ENST00000222256 UBR1Q8IWV7 1749 aa31.29■■■□□ 2.6
RAB3A-201ENST00000222256 CHGAP10645 457 aaKnown RBP31.29■■■□□ 2.6
RAB3A-201ENST00000222256 NEUROD1Q13562 356 aa31.28■■■□□ 2.6
RAB3A-201ENST00000222256 NEURL4Q96JN8 1562 aa31.28■■■□□ 2.6
RAB3A-201ENST00000222256 SPATA31E1Q6ZUB1 1445 aa31.27■■■□□ 2.6
RAB3A-201ENST00000222256 MYO5BQ9ULV0 1848 aa31.26■■■□□ 2.59
RAB3A-201ENST00000222256 THEMISQ8N1K5 641 aaPredicted RBP31.22■■■□□ 2.59
RAB3A-201ENST00000222256 RGL3Q3MIN7 710 aa31.19■■■□□ 2.58
RAB3A-201ENST00000222256 ZNF326Q5BKZ1 582 aaKnown RBP31.19■■■□□ 2.58
RAB3A-201ENST00000222256 LMTK3Q96Q04 1460 aa31.18■■■□□ 2.58
RAB3A-201ENST00000222256 RPGRIP1LQ68CZ1 1315 aa31.14■■■□□ 2.58
RAB3A-201ENST00000222256 TMEM2Q9UHN6 1383 aa31.14■■■□□ 2.58
RAB3A-201ENST00000222256 SLIT1O75093 1534 aa31.13■■■□□ 2.57
RAB3A-201ENST00000222256 AEBP2Q6ZN18 517 aaPredicted RBP31.13■■■□□ 2.57
RAB3A-201ENST00000222256 TONSLQ96HA7 1378 aa31.13■■■□□ 2.57
RAB3A-201ENST00000222256 ARHGAP23Q9P227 1491 aa31.12■■■□□ 2.57
RAB3A-201ENST00000222256 TIMELESSQ9UNS1 1208 aa31.1■■■□□ 2.57
RAB3A-201ENST00000222256 NEXMIFQ5QGS0 1516 aa31.1■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms