RNA–Protein interactions for RNA: ENST00000221573.10

SNAPC2-201, Transcript of small nuclear RNA activating complex polypeptide 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC2, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC2-201ENST00000221573 GGT6Q6P531 493 aa29.19■■■□□ 2.26
SNAPC2-201ENST00000221573 UNC13BO14795 1591 aa29.18■■■□□ 2.26
SNAPC2-201ENST00000221573 PRDM15P57071 1507 aaPredicted RBP29.18■■■□□ 2.26
SNAPC2-201ENST00000221573 ADAMTSL3P82987 1691 aa29.17■■■□□ 2.26
SNAPC2-201ENST00000221573 FER1L4A9Z1Z3 1794 aa29.17■■■□□ 2.26
SNAPC2-201ENST00000221573 MADDQ8WXG6 1647 aa29.15■■■□□ 2.26
SNAPC2-201ENST00000221573 PCGF6Q9BYE7 350 aa29.14■■■□□ 2.25
SNAPC2-201ENST00000221573 CEP152O94986 1710 aa29.13■■■□□ 2.25
SNAPC2-201ENST00000221573 RAB3GAP2Q9H2M9 1393 aa29.13■■■□□ 2.25
SNAPC2-201ENST00000221573 CLTCQ00610 1675 aaKnown RBP29.11■■■□□ 2.25
SNAPC2-201ENST00000221573 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.1■■■□□ 2.25
SNAPC2-201ENST00000221573 RIMS1Q86UR5 1692 aaKnown RBP29.09■■■□□ 2.25
SNAPC2-201ENST00000221573 VWDEQ8N2E2 1590 aa29.09■■■□□ 2.25
SNAPC2-201ENST00000221573 ZC3H13Q5T200 1668 aaKnown RBP29.08■■■□□ 2.25
SNAPC2-201ENST00000221573 KDM5DQ9BY66 1539 aa29.08■■■□□ 2.25
SNAPC2-201ENST00000221573 ABCC3O15438 1527 aa29.06■■■□□ 2.24
SNAPC2-201ENST00000221573 IQGAP3Q86VI3 1631 aa29.06■■■□□ 2.24
SNAPC2-201ENST00000221573 FAM135AQ9P2D6 1515 aa29.05■■■□□ 2.24
SNAPC2-201ENST00000221573 KANK1Q14678 1352 aa29.03■■■□□ 2.24
SNAPC2-201ENST00000221573 NUP155O75694 1391 aa29.03■■■□□ 2.24
SNAPC2-201ENST00000221573 CAMSAP1Q5T5Y3 1602 aa29.02■■■□□ 2.24
SNAPC2-201ENST00000221573 MROH2AA6NES4 1674 aa29.02■■■□□ 2.24
SNAPC2-201ENST00000221573 PPP6R1Q9UPN7 881 aa29.01■■■□□ 2.23
SNAPC2-201ENST00000221573 WASHC2CQ9Y4E1 1318 aa29.01■■■□□ 2.23
SNAPC2-201ENST00000221573 KDM4FA0A1W2PPD8 638 aa29■■■□□ 2.23
SNAPC2-201ENST00000221573 TRIM52Q96A61 297 aa29■■■□□ 2.23
SNAPC2-201ENST00000221573 LMTK2Q8IWU2 1503 aa28.99■■■□□ 2.23
SNAPC2-201ENST00000221573 ESF1Q9H501 851 aaKnown RBP28.99■■■□□ 2.23
SNAPC2-201ENST00000221573 TET3O43151 1660 aa28.98■■■□□ 2.23
SNAPC2-201ENST00000221573 CNTLNQ9NXG0 1405 aa28.98■■■□□ 2.23
SNAPC2-201ENST00000221573 C3P01024 1663 aa28.97■■■□□ 2.23
SNAPC2-201ENST00000221573 PZPP20742 1482 aa28.96■■■□□ 2.23
SNAPC2-201ENST00000221573 HRCP23327 699 aa28.94■■■□□ 2.22
SNAPC2-201ENST00000221573 EFCAB6Q5THR3 1501 aa28.94■■■□□ 2.22
SNAPC2-201ENST00000221573 E9PCH4 1651 aa28.92■■■□□ 2.22
SNAPC2-201ENST00000221573 CFAP65Q6ZU64 1925 aaKnown RBP28.92■■■□□ 2.22
SNAPC2-201ENST00000221573 PTPRMP28827 1452 aa28.91■■■□□ 2.22
SNAPC2-201ENST00000221573 ZMYM3Q14202 1370 aa28.9■■■□□ 2.22
SNAPC2-201ENST00000221573 ACIN1Q9UKV3 1341 aaKnown RBP28.87■■■□□ 2.21
SNAPC2-201ENST00000221573 NPATQ14207 1427 aa28.87■■■□□ 2.21
SNAPC2-201ENST00000221573 CEBPAP49715 358 aaPredicted RBP28.86■■■□□ 2.21
SNAPC2-201ENST00000221573 PLPPR3Q6T4P5 718 aa28.86■■■□□ 2.21
SNAPC2-201ENST00000221573 ARHGAP31Q2M1Z3 1444 aa28.85■■■□□ 2.21
SNAPC2-201ENST00000221573 SLC4A1APQ9BWU0 796 aaKnown RBP28.84■■■□□ 2.21
SNAPC2-201ENST00000221573 PREX1Q8TCU6 1659 aa28.84■■■□□ 2.21
SNAPC2-201ENST00000221573 MPHOSPH9Q99550 1183 aa28.82■■■□□ 2.2
SNAPC2-201ENST00000221573 RPRD2Q5VT52 1461 aaKnown RBP28.8■■■□□ 2.2
SNAPC2-201ENST00000221573 PKD2Q13563 968 aa28.79■■■□□ 2.2
SNAPC2-201ENST00000221573 FBXO31Q5XUX0 539 aaPredicted RBP28.79■■■□□ 2.2
SNAPC2-201ENST00000221573 SPATA31D1Q6ZQQ2 1576 aa28.78■■■□□ 2.2
SNAPC2-201ENST00000221573 ERVK-7P63135 1459 aa28.78■■■□□ 2.2
SNAPC2-201ENST00000221573 SPHKAPQ2M3C7 1700 aa28.77■■■□□ 2.2
SNAPC2-201ENST00000221573 FOXD1Q16676 465 aa28.75■■■□□ 2.19
SNAPC2-201ENST00000221573 SYNMO15061 1565 aa28.74■■■□□ 2.19
SNAPC2-201ENST00000221573 NOS1P29475 1434 aa28.72■■■□□ 2.19
SNAPC2-201ENST00000221573 DHX57Q6P158 1386 aaKnown RBP28.7■■■□□ 2.18
SNAPC2-201ENST00000221573 SETD1BQ9UPS6 1966 aaKnown RBP28.68■■■□□ 2.18
SNAPC2-201ENST00000221573 MYO3AQ8NEV4 1616 aa28.68■■■□□ 2.18
SNAPC2-201ENST00000221573 TNRQ92752 1358 aa28.68■■■□□ 2.18
SNAPC2-201ENST00000221573 PTPRTO14522 1441 aa28.67■■■□□ 2.18
SNAPC2-201ENST00000221573 UGGT1Q9NYU2 1555 aa28.66■■■□□ 2.18
SNAPC2-201ENST00000221573 PLA2R1Q13018 1463 aa28.66■■■□□ 2.18
SNAPC2-201ENST00000221573 TRPM2O94759 1503 aa28.66■■■□□ 2.18
SNAPC2-201ENST00000221573 PIK3C2BO00750 1634 aa28.63■■■□□ 2.17
SNAPC2-201ENST00000221573 CLTCL1P53675 1640 aa28.62■■■□□ 2.17
SNAPC2-201ENST00000221573 ZNF142P52746 1687 aaPredicted RBP28.59■■■□□ 2.17
SNAPC2-201ENST00000221573 ANKRD30BQ9BXX2 1392 aa28.58■■■□□ 2.17
SNAPC2-201ENST00000221573 NLRP1Q9C000 1473 aa28.57■■■□□ 2.16
SNAPC2-201ENST00000221573 CEP170BQ9Y4F5 1589 aaPredicted RBP28.57■■■□□ 2.16
SNAPC2-201ENST00000221573 UHRF1BP1Q6BDS2 1440 aa28.55■■■□□ 2.16
SNAPC2-201ENST00000221573 MYO5BQ9ULV0 1848 aa28.55■■■□□ 2.16
SNAPC2-201ENST00000221573 IDI1Q13907 227 aa28.53■■■□□ 2.16
SNAPC2-201ENST00000221573 KIF1BO60333 1816 aa28.53■■■□□ 2.16
SNAPC2-201ENST00000221573 UBR1Q8IWV7 1749 aa28.53■■■□□ 2.16
SNAPC2-201ENST00000221573 A2ML1A8K2U0 1454 aa28.53■■■□□ 2.16
SNAPC2-201ENST00000221573 SLC52A1Q9NWF4 448 aa28.52■■■□□ 2.16
SNAPC2-201ENST00000221573 CCDC144AA2RUR9 1427 aa28.52■■■□□ 2.16
SNAPC2-201ENST00000221573 ADGRB3O60242 1522 aa28.5■■■□□ 2.15
SNAPC2-201ENST00000221573 TMEM131LA2VDJ0 1609 aa28.49■■■□□ 2.15
SNAPC2-201ENST00000221573 LMTK3Q96Q04 1460 aa28.49■■■□□ 2.15
SNAPC2-201ENST00000221573 KDM5AP29375 1690 aaKnown RBP28.48■■■□□ 2.15
SNAPC2-201ENST00000221573 AEBP2Q6ZN18 517 aaPredicted RBP28.46■■■□□ 2.15
SNAPC2-201ENST00000221573 CHGAP10645 457 aaKnown RBP28.43■■■□□ 2.14
SNAPC2-201ENST00000221573 CCER1Q8TC90 406 aaPredicted RBP28.41■■■□□ 2.14
SNAPC2-201ENST00000221573 STAG3Q9UJ98 1225 aa28.41■■■□□ 2.14
SNAPC2-201ENST00000221573 SIN3AQ96ST3 1273 aa28.39■■■□□ 2.14
SNAPC2-201ENST00000221573 SPATA31E1Q6ZUB1 1445 aa28.37■■■□□ 2.13
SNAPC2-201ENST00000221573 NEURL4Q96JN8 1562 aa28.35■■■□□ 2.13
SNAPC2-201ENST00000221573 HSPA2P54652 639 aa28.35■■■□□ 2.13
SNAPC2-201ENST00000221573 THEMISQ8N1K5 641 aaPredicted RBP28.33■■■□□ 2.13
SNAPC2-201ENST00000221573 NEUROD1Q13562 356 aa28.32■■■□□ 2.12
SNAPC2-201ENST00000221573 SLIT1O75093 1534 aa28.32■■■□□ 2.12
SNAPC2-201ENST00000221573 IFT172Q9UG01 1749 aa28.32■■■□□ 2.12
SNAPC2-201ENST00000221573 CLSPNQ9HAW4 1339 aa28.31■■■□□ 2.12
SNAPC2-201ENST00000221573 ARHGAP23Q9P227 1491 aa28.31■■■□□ 2.12
SNAPC2-201ENST00000221573 PPLO60437 1756 aa28.3■■■□□ 2.12
SNAPC2-201ENST00000221573 RGL3Q3MIN7 710 aa28.3■■■□□ 2.12
SNAPC2-201ENST00000221573 TMEM2Q9UHN6 1383 aa28.3■■■□□ 2.12
SNAPC2-201ENST00000221573 POLR1AO95602 1720 aaPredicted RBP28.3■■■□□ 2.12
SNAPC2-201ENST00000221573 NEXMIFQ5QGS0 1516 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms