RNA–Protein interactions for RNA: ENST00000216492.9

CHGA-201, Transcript of chromogranin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHGA, Length 2,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-201ENST00000216492 MLH3Q9UHC1 1453 aa24.11■■□□□ 1.45
CHGA-201ENST00000216492 KIF3BO15066 747 aa24.11■■□□□ 1.45
CHGA-201ENST00000216492 KDM5CP41229 1560 aa24.09■■□□□ 1.45
CHGA-201ENST00000216492 RPRD2Q5VT52 1461 aaKnown RBP24.09■■□□□ 1.45
CHGA-201ENST00000216492 UNC13BO14795 1591 aa24.09■■□□□ 1.45
CHGA-201ENST00000216492 KIDINS220Q9ULH0 1771 aa24.07■■□□□ 1.44
CHGA-201ENST00000216492 MYT1Q01538 1121 aa24.07■■□□□ 1.44
CHGA-201ENST00000216492 L3MBTL2Q969R5 705 aa24.07■■□□□ 1.44
CHGA-201ENST00000216492 MAGI2Q86UL8 1455 aa24.05■■□□□ 1.44
CHGA-201ENST00000216492 TEX14Q8IWB6 1497 aa24.05■■□□□ 1.44
CHGA-201ENST00000216492 A2MP01023 1474 aa24.03■■□□□ 1.44
CHGA-201ENST00000216492 HECW2Q9P2P5 1572 aa24.01■■□□□ 1.43
CHGA-201ENST00000216492 KANK1Q14678 1352 aa24■■□□□ 1.43
CHGA-201ENST00000216492 IQGAP3Q86VI3 1631 aa24■■□□□ 1.43
CHGA-201ENST00000216492 TSPOAP1O95153 1857 aa23.99■■□□□ 1.43
CHGA-201ENST00000216492 PPRC1Q5VV67 1664 aaKnown RBP23.96■■□□□ 1.43
CHGA-201ENST00000216492 RICTORQ6R327 1708 aa23.95■■□□□ 1.42
CHGA-201ENST00000216492 EIF2AK4Q9P2K8 1649 aaKnown RBP23.95■■□□□ 1.42
CHGA-201ENST00000216492 GGT6Q6P531 493 aa23.94■■□□□ 1.42
CHGA-201ENST00000216492 KIF13AQ9H1H9 1805 aa23.93■■□□□ 1.42
CHGA-201ENST00000216492 DEPDC5O75140 1603 aa23.93■■□□□ 1.42
CHGA-201ENST00000216492 DNAJC5Q9H3Z4 198 aa23.93■■□□□ 1.42
CHGA-201ENST00000216492 PLA2R1Q13018 1463 aa23.92■■□□□ 1.42
CHGA-201ENST00000216492 CCDC144AA2RUR9 1427 aa23.92■■□□□ 1.42
CHGA-201ENST00000216492 YEATS2Q9ULM3 1422 aa23.92■■□□□ 1.42
CHGA-201ENST00000216492 ABCA6Q8N139 1617 aa23.9■■□□□ 1.42
CHGA-201ENST00000216492 FRMPD1Q5SYB0 1578 aa23.9■■□□□ 1.42
CHGA-201ENST00000216492 VWDEQ8N2E2 1590 aa23.88■■□□□ 1.41
CHGA-201ENST00000216492 ATP10AO60312 1499 aa23.87■■□□□ 1.41
CHGA-201ENST00000216492 PRDM15P57071 1507 aaPredicted RBP23.87■■□□□ 1.41
CHGA-201ENST00000216492 NBPF8Q3BBV2 869 aa23.87■■□□□ 1.41
CHGA-201ENST00000216492 DIP2CQ9Y2E4 1556 aa23.87■■□□□ 1.41
CHGA-201ENST00000216492 MROH1Q8NDA8 1641 aa23.86■■□□□ 1.41
CHGA-201ENST00000216492 COL17A1Q9UMD9 1497 aaPredicted RBP23.85■■□□□ 1.41
CHGA-201ENST00000216492 ZMYM4Q5VZL5 1548 aa23.85■■□□□ 1.41
CHGA-201ENST00000216492 WASHC2CQ9Y4E1 1318 aa23.85■■□□□ 1.41
CHGA-201ENST00000216492 TRHP20396 242 aaPredicted RBP23.84■■□□□ 1.41
CHGA-201ENST00000216492 RGL3Q3MIN7 710 aa23.82■■□□□ 1.4
CHGA-201ENST00000216492 DCAF11Q8TEB1 546 aa23.82■■□□□ 1.4
CHGA-201ENST00000216492 HIRIP3Q9BW71 556 aaPredicted RBP23.81■■□□□ 1.4
CHGA-201ENST00000216492 KDM2AQ9Y2K7 1162 aa23.81■■□□□ 1.4
CHGA-201ENST00000216492 RNF17Q9BXT8 1623 aaKnown RBP23.81■■□□□ 1.4
CHGA-201ENST00000216492 PTPRTO14522 1441 aa23.81■■□□□ 1.4
CHGA-201ENST00000216492 TET3O43151 1660 aa23.8■■□□□ 1.4
CHGA-201ENST00000216492 E9PCH4 1651 aa23.8■■□□□ 1.4
CHGA-201ENST00000216492 ZNF326Q5BKZ1 582 aaKnown RBP23.79■■□□□ 1.4
CHGA-201ENST00000216492 LMTK2Q8IWU2 1503 aa23.79■■□□□ 1.4
CHGA-201ENST00000216492 DDX10Q13206 875 aaKnown RBP23.77■■□□□ 1.4
CHGA-201ENST00000216492 BCORL1Q5H9F3 1711 aa23.77■■□□□ 1.4
CHGA-201ENST00000216492 EIF4G2P78344 907 aaKnown RBP eCLIP23.74■■□□□ 1.39
CHGA-201ENST00000216492 EFCAB6Q5THR3 1501 aa23.73■■□□□ 1.39
CHGA-201ENST00000216492 TRPM2O94759 1503 aa23.72■■□□□ 1.39
CHGA-201ENST00000216492 UHRF1BP1Q6BDS2 1440 aa23.72■■□□□ 1.39
CHGA-201ENST00000216492 HSPA5P11021 654 aaKnown RBP23.71■■□□□ 1.39
CHGA-201ENST00000216492 NPATQ14207 1427 aa23.7■■□□□ 1.38
CHGA-201ENST00000216492 ABCC3O15438 1527 aa23.7■■□□□ 1.38
CHGA-201ENST00000216492 SPATA31E1Q6ZUB1 1445 aa23.68■■□□□ 1.38
CHGA-201ENST00000216492 CEP152O94986 1710 aa23.67■■□□□ 1.38
CHGA-201ENST00000216492 SPHKAPQ2M3C7 1700 aa23.67■■□□□ 1.38
CHGA-201ENST00000216492 PPP6R1Q9UPN7 881 aa23.67■■□□□ 1.38
CHGA-201ENST00000216492 REREQ9P2R6 1566 aa23.66■■□□□ 1.38
CHGA-201ENST00000216492 AGLP35573 1532 aa23.65■■□□□ 1.38
CHGA-201ENST00000216492 ANP32CO43423 234 aa23.64■■□□□ 1.37
CHGA-201ENST00000216492 CCER2I3L3R5 266 aa23.63■■□□□ 1.37
CHGA-201ENST00000216492 MLECQ14165 292 aa23.63■■□□□ 1.37
CHGA-201ENST00000216492 ARHGAP31Q2M1Z3 1444 aa23.62■■□□□ 1.37
CHGA-201ENST00000216492 CLTCL1P53675 1640 aa23.62■■□□□ 1.37
CHGA-201ENST00000216492 STAC3Q96MF2 364 aa23.62■■□□□ 1.37
CHGA-201ENST00000216492 CARD11Q9BXL7 1154 aa23.61■■□□□ 1.37
CHGA-201ENST00000216492 PRAG1Q86YV5 1406 aa23.61■■□□□ 1.37
CHGA-201ENST00000216492 CNTLNQ9NXG0 1405 aa23.6■■□□□ 1.37
CHGA-201ENST00000216492 ARHGEF40Q8TER5 1519 aa23.6■■□□□ 1.37
CHGA-201ENST00000216492 UGGT1Q9NYU2 1555 aa23.59■■□□□ 1.37
CHGA-201ENST00000216492 RALGAPBQ86X10 1494 aa23.58■■□□□ 1.37
CHGA-201ENST00000216492 CHGAP10645 457 aaKnown RBP23.58■■□□□ 1.36
CHGA-201ENST00000216492 CAMSAP1Q5T5Y3 1602 aa23.58■■□□□ 1.36
CHGA-201ENST00000216492 NOS1P29475 1434 aa23.57■■□□□ 1.36
CHGA-201ENST00000216492 ARID4BQ4LE39 1312 aaPredicted RBP23.57■■□□□ 1.36
CHGA-201ENST00000216492 ROCK2O75116 1388 aaKnown RBP23.56■■□□□ 1.36
CHGA-201ENST00000216492 ZC3H13Q5T200 1668 aaKnown RBP23.55■■□□□ 1.36
CHGA-201ENST00000216492 NBPF1Q3BBV0 1214 aa23.55■■□□□ 1.36
CHGA-201ENST00000216492 USP47Q96K76 1375 aa23.54■■□□□ 1.36
CHGA-201ENST00000216492 ESF1Q9H501 851 aaKnown RBP23.53■■□□□ 1.36
CHGA-201ENST00000216492 SUPT16HQ9Y5B9 1047 aaKnown RBP23.53■■□□□ 1.36
CHGA-201ENST00000216492 CFAP65Q6ZU64 1925 aaKnown RBP23.53■■□□□ 1.36
CHGA-201ENST00000216492 FBXO31Q5XUX0 539 aaPredicted RBP23.53■■□□□ 1.36
CHGA-201ENST00000216492 SLC52A1Q9NWF4 448 aa23.53■■□□□ 1.36
CHGA-201ENST00000216492 NEURL4Q96JN8 1562 aa23.52■■□□□ 1.36
CHGA-201ENST00000216492 SIGLEC1Q9BZZ2 1709 aa23.52■■□□□ 1.36
CHGA-201ENST00000216492 IDI1Q13907 227 aa23.52■■□□□ 1.35
CHGA-201ENST00000216492 WASHC2AQ641Q2 1341 aa23.5■■□□□ 1.35
CHGA-201ENST00000216492 C11orf95C9JLR9 678 aaPredicted RBP23.5■■□□□ 1.35
CHGA-201ENST00000216492 GPRASP1Q5JY77 1395 aa23.46■■□□□ 1.35
CHGA-201ENST00000216492 ST20-MTHFSA0A0A6YYL1 179 aa23.46■■□□□ 1.35
CHGA-201ENST00000216492 KIF1BO60333 1816 aa23.46■■□□□ 1.35
CHGA-201ENST00000216492 RPGRIP1LQ68CZ1 1315 aa23.46■■□□□ 1.35
CHGA-201ENST00000216492 TRPM1Q7Z4N2 1603 aa23.45■■□□□ 1.34
CHGA-201ENST00000216492 ADGRF5Q8IZF2 1346 aa23.44■■□□□ 1.34
CHGA-201ENST00000216492 SYNMO15061 1565 aa23.44■■□□□ 1.34
CHGA-201ENST00000216492 ZMYM3Q14202 1370 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms