RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 SETD5Q9C0A6 1442 aa30.17■■■□□ 2.42
RHBDD3-201ENST00000216085 KANK1Q14678 1352 aa30.17■■■□□ 2.42
RHBDD3-201ENST00000216085 FAM135AQ9P2D6 1515 aa30.17■■■□□ 2.42
RHBDD3-201ENST00000216085 DEPDC5O75140 1603 aa30.16■■■□□ 2.42
RHBDD3-201ENST00000216085 PRDM15P57071 1507 aaPredicted RBP30.15■■■□□ 2.42
RHBDD3-201ENST00000216085 ACIN1Q9UKV3 1341 aaKnown RBP30.15■■■□□ 2.42
RHBDD3-201ENST00000216085 ADAMTSL3P82987 1691 aa30.14■■■□□ 2.42
RHBDD3-201ENST00000216085 FER1L4A9Z1Z3 1794 aa30.13■■■□□ 2.41
RHBDD3-201ENST00000216085 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.13■■■□□ 2.41
RHBDD3-201ENST00000216085 CNTLNQ9NXG0 1405 aa30.12■■■□□ 2.41
RHBDD3-201ENST00000216085 UNC13BO14795 1591 aa30.12■■■□□ 2.41
RHBDD3-201ENST00000216085 KDM5DQ9BY66 1539 aa30.11■■■□□ 2.41
RHBDD3-201ENST00000216085 MROH1Q8NDA8 1641 aa30.11■■■□□ 2.41
RHBDD3-201ENST00000216085 WASHC2CQ9Y4E1 1318 aa30.1■■■□□ 2.41
RHBDD3-201ENST00000216085 MADDQ8WXG6 1647 aa30.1■■■□□ 2.41
RHBDD3-201ENST00000216085 ZC3H13Q5T200 1668 aaKnown RBP30.09■■■□□ 2.41
RHBDD3-201ENST00000216085 RAB3GAP2Q9H2M9 1393 aa30.07■■■□□ 2.4
RHBDD3-201ENST00000216085 NUP155O75694 1391 aa30.05■■■□□ 2.4
RHBDD3-201ENST00000216085 CLTCQ00610 1675 aaKnown RBP30.03■■■□□ 2.4
RHBDD3-201ENST00000216085 RIMS1Q86UR5 1692 aaKnown RBP30.03■■■□□ 2.4
RHBDD3-201ENST00000216085 ABCC3O15438 1527 aa30.03■■■□□ 2.4
RHBDD3-201ENST00000216085 TRIM52Q96A61 297 aa30.03■■■□□ 2.4
RHBDD3-201ENST00000216085 VWDEQ8N2E2 1590 aa30.02■■■□□ 2.4
RHBDD3-201ENST00000216085 MROH2AA6NES4 1674 aa30.01■■■□□ 2.4
RHBDD3-201ENST00000216085 KDM4FA0A1W2PPD8 638 aa30■■■□□ 2.39
RHBDD3-201ENST00000216085 HRCP23327 699 aa30■■■□□ 2.39
RHBDD3-201ENST00000216085 PCGF6Q9BYE7 350 aa30■■■□□ 2.39
RHBDD3-201ENST00000216085 IQGAP3Q86VI3 1631 aa29.99■■■□□ 2.39
RHBDD3-201ENST00000216085 LMTK2Q8IWU2 1503 aa29.99■■■□□ 2.39
RHBDD3-201ENST00000216085 CEP152O94986 1710 aa29.99■■■□□ 2.39
RHBDD3-201ENST00000216085 CAMSAP1Q5T5Y3 1602 aa29.95■■■□□ 2.38
RHBDD3-201ENST00000216085 PTPRMP28827 1452 aa29.95■■■□□ 2.38
RHBDD3-201ENST00000216085 ZMYM3Q14202 1370 aa29.95■■■□□ 2.38
RHBDD3-201ENST00000216085 TET3O43151 1660 aa29.93■■■□□ 2.38
RHBDD3-201ENST00000216085 EFCAB6Q5THR3 1501 aa29.91■■■□□ 2.38
RHBDD3-201ENST00000216085 ARHGAP31Q2M1Z3 1444 aa29.9■■■□□ 2.38
RHBDD3-201ENST00000216085 PZPP20742 1482 aa29.89■■■□□ 2.38
RHBDD3-201ENST00000216085 C3P01024 1663 aa29.89■■■□□ 2.37
RHBDD3-201ENST00000216085 SLC4A1APQ9BWU0 796 aaKnown RBP29.87■■■□□ 2.37
RHBDD3-201ENST00000216085 PLPPR3Q6T4P5 718 aa29.87■■■□□ 2.37
RHBDD3-201ENST00000216085 RPRD2Q5VT52 1461 aaKnown RBP29.86■■■□□ 2.37
RHBDD3-201ENST00000216085 NPATQ14207 1427 aa29.83■■■□□ 2.37
RHBDD3-201ENST00000216085 CEBPAP49715 358 aaPredicted RBP29.83■■■□□ 2.37
RHBDD3-201ENST00000216085 MPHOSPH9Q99550 1183 aa29.8■■■□□ 2.36
RHBDD3-201ENST00000216085 E9PCH4 1651 aa29.78■■■□□ 2.36
RHBDD3-201ENST00000216085 PKD2Q13563 968 aa29.77■■■□□ 2.36
RHBDD3-201ENST00000216085 ERVK-7P63135 1459 aa29.77■■■□□ 2.36
RHBDD3-201ENST00000216085 PREX1Q8TCU6 1659 aa29.76■■■□□ 2.35
RHBDD3-201ENST00000216085 SPATA31D1Q6ZQQ2 1576 aa29.75■■■□□ 2.35
RHBDD3-201ENST00000216085 FBXO31Q5XUX0 539 aaPredicted RBP29.74■■■□□ 2.35
RHBDD3-201ENST00000216085 TNRQ92752 1358 aa29.73■■■□□ 2.35
RHBDD3-201ENST00000216085 CFAP65Q6ZU64 1925 aaKnown RBP29.7■■■□□ 2.35
RHBDD3-201ENST00000216085 AEBP2Q6ZN18 517 aaPredicted RBP29.69■■■□□ 2.34
RHBDD3-201ENST00000216085 NOS1P29475 1434 aa29.69■■■□□ 2.34
RHBDD3-201ENST00000216085 SETD1BQ9UPS6 1966 aaKnown RBP29.69■■■□□ 2.34
RHBDD3-201ENST00000216085 SPHKAPQ2M3C7 1700 aa29.67■■■□□ 2.34
RHBDD3-201ENST00000216085 NLRP1Q9C000 1473 aa29.65■■■□□ 2.34
RHBDD3-201ENST00000216085 UHRF1BP1Q6BDS2 1440 aa29.65■■■□□ 2.34
RHBDD3-201ENST00000216085 PTPRTO14522 1441 aa29.63■■■□□ 2.33
RHBDD3-201ENST00000216085 MYO3AQ8NEV4 1616 aa29.63■■■□□ 2.33
RHBDD3-201ENST00000216085 SLC52A1Q9NWF4 448 aa29.63■■■□□ 2.33
RHBDD3-201ENST00000216085 FOXD1Q16676 465 aa29.62■■■□□ 2.33
RHBDD3-201ENST00000216085 SYNMO15061 1565 aa29.62■■■□□ 2.33
RHBDD3-201ENST00000216085 TRPM2O94759 1503 aa29.62■■■□□ 2.33
RHBDD3-201ENST00000216085 DHX57Q6P158 1386 aaKnown RBP29.57■■■□□ 2.32
RHBDD3-201ENST00000216085 CEP170BQ9Y4F5 1589 aaPredicted RBP29.56■■■□□ 2.32
RHBDD3-201ENST00000216085 A2ML1A8K2U0 1454 aa29.56■■■□□ 2.32
RHBDD3-201ENST00000216085 CCDC144AA2RUR9 1427 aa29.55■■■□□ 2.32
RHBDD3-201ENST00000216085 ZNF142P52746 1687 aaPredicted RBP29.55■■■□□ 2.32
RHBDD3-201ENST00000216085 PIK3C2BO00750 1634 aa29.54■■■□□ 2.32
RHBDD3-201ENST00000216085 STAG3Q9UJ98 1225 aa29.54■■■□□ 2.32
RHBDD3-201ENST00000216085 PLA2R1Q13018 1463 aa29.53■■■□□ 2.32
RHBDD3-201ENST00000216085 IDI1Q13907 227 aa29.52■■■□□ 2.32
RHBDD3-201ENST00000216085 UGGT1Q9NYU2 1555 aa29.5■■■□□ 2.31
RHBDD3-201ENST00000216085 ANKRD30BQ9BXX2 1392 aa29.5■■■□□ 2.31
RHBDD3-201ENST00000216085 CLTCL1P53675 1640 aa29.49■■■□□ 2.31
RHBDD3-201ENST00000216085 ADGRB3O60242 1522 aa29.48■■■□□ 2.31
RHBDD3-201ENST00000216085 LMTK3Q96Q04 1460 aa29.47■■■□□ 2.31
RHBDD3-201ENST00000216085 KDM5AP29375 1690 aaKnown RBP29.47■■■□□ 2.31
RHBDD3-201ENST00000216085 CHGAP10645 457 aaKnown RBP29.46■■■□□ 2.31
RHBDD3-201ENST00000216085 THEMISQ8N1K5 641 aaPredicted RBP29.46■■■□□ 2.31
RHBDD3-201ENST00000216085 UBR1Q8IWV7 1749 aa29.43■■■□□ 2.3
RHBDD3-201ENST00000216085 KIF1BO60333 1816 aa29.43■■■□□ 2.3
RHBDD3-201ENST00000216085 TMEM131LA2VDJ0 1609 aa29.4■■■□□ 2.3
RHBDD3-201ENST00000216085 CCER1Q8TC90 406 aaPredicted RBP29.37■■■□□ 2.29
RHBDD3-201ENST00000216085 CLSPNQ9HAW4 1339 aa29.36■■■□□ 2.29
RHBDD3-201ENST00000216085 ZNF326Q5BKZ1 582 aaKnown RBP29.35■■■□□ 2.29
RHBDD3-201ENST00000216085 NEURL4Q96JN8 1562 aa29.34■■■□□ 2.29
RHBDD3-201ENST00000216085 HDGFP51858 240 aaKnown RBP29.33■■■□□ 2.29
RHBDD3-201ENST00000216085 HSPA2P54652 639 aa29.33■■■□□ 2.29
RHBDD3-201ENST00000216085 TMEM2Q9UHN6 1383 aa29.32■■■□□ 2.28
RHBDD3-201ENST00000216085 SLIT1O75093 1534 aa29.31■■■□□ 2.28
RHBDD3-201ENST00000216085 MYO5BQ9ULV0 1848 aa29.31■■■□□ 2.28
RHBDD3-201ENST00000216085 EID1Q9Y6B2 187 aa29.31■■■□□ 2.28
RHBDD3-201ENST00000216085 SPATA31E1Q6ZUB1 1445 aa29.3■■■□□ 2.28
RHBDD3-201ENST00000216085 ARHGAP23Q9P227 1491 aa29.28■■■□□ 2.28
RHBDD3-201ENST00000216085 ANKLE2Q86XL3 938 aa29.28■■■□□ 2.28
RHBDD3-201ENST00000216085 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.28■■■□□ 2.28
RHBDD3-201ENST00000216085 RPGRIP1LQ68CZ1 1315 aa29.27■■■□□ 2.28
RHBDD3-201ENST00000216085 RGL3Q3MIN7 710 aa29.26■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms