RNA–Protein interactions for RNA: ENST00000215587.11

POLR2E-201, Transcript of RNA polymerase II subunit E, humanhuman

TSL 3

Gene POLR2E, Length 1,286 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-201ENST00000215587 EIF2AK4Q9P2K8 1649 aaKnown RBP24.47■■□□□ 1.51
POLR2E-201ENST00000215587 DHX57Q6P158 1386 aaKnown RBP24.46■■□□□ 1.51
POLR2E-201ENST00000215587 ARHGEF40Q8TER5 1519 aa24.45■■□□□ 1.51
POLR2E-201ENST00000215587 ATP10AO60312 1499 aa24.45■■□□□ 1.5
POLR2E-201ENST00000215587 UNC13BO14795 1591 aa24.43■■□□□ 1.5
POLR2E-201ENST00000215587 NUP155O75694 1391 aa24.41■■□□□ 1.5
POLR2E-201ENST00000215587 KDM5DQ9BY66 1539 aa24.4■■□□□ 1.5
POLR2E-201ENST00000215587 KIF3BO15066 747 aa24.4■■□□□ 1.5
POLR2E-201ENST00000215587 REREQ9P2R6 1566 aa24.4■■□□□ 1.5
POLR2E-201ENST00000215587 BCORL1Q5H9F3 1711 aa24.37■■□□□ 1.49
POLR2E-201ENST00000215587 DEPDC5O75140 1603 aa24.36■■□□□ 1.49
POLR2E-201ENST00000215587 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.36■■□□□ 1.491e-12■□□□□ 9.3
POLR2E-201ENST00000215587 PZPP20742 1482 aa24.36■■□□□ 1.49
POLR2E-201ENST00000215587 RNF17Q9BXT8 1623 aaKnown RBP24.35■■□□□ 1.49
POLR2E-201ENST00000215587 KANK1Q14678 1352 aa24.35■■□□□ 1.49
POLR2E-201ENST00000215587 SLC4A1APQ9BWU0 796 aaKnown RBP24.35■■□□□ 1.49
POLR2E-201ENST00000215587 MADDQ8WXG6 1647 aa24.35■■□□□ 1.49
POLR2E-201ENST00000215587 CLSPNQ9HAW4 1339 aa24.35■■□□□ 1.49
POLR2E-201ENST00000215587 MPHOSPH9Q99550 1183 aa24.34■■□□□ 1.49
POLR2E-201ENST00000215587 IQGAP3Q86VI3 1631 aa24.33■■□□□ 1.49
POLR2E-201ENST00000215587 AGLP35573 1532 aa24.33■■□□□ 1.49
POLR2E-201ENST00000215587 PRDM15P57071 1507 aaPredicted RBP24.33■■□□□ 1.49
POLR2E-201ENST00000215587 FAM135AQ9P2D6 1515 aa24.32■■□□□ 1.48
POLR2E-201ENST00000215587 MROH1Q8NDA8 1641 aa24.29■■□□□ 1.48
POLR2E-201ENST00000215587 GGT6Q6P531 493 aa24.27■■□□□ 1.48
POLR2E-201ENST00000215587 VWDEQ8N2E2 1590 aa24.27■■□□□ 1.48
POLR2E-201ENST00000215587 ARID4BQ4LE39 1312 aaPredicted RBP24.26■■□□□ 1.47
POLR2E-201ENST00000215587 CERKQ8TCT0 537 aa24.25■■□□□ 1.47
POLR2E-201ENST00000215587 PKD2Q13563 968 aa24.24■■□□□ 1.47
POLR2E-201ENST00000215587 SOCS7O14512 581 aa24.23■■□□□ 1.47
POLR2E-201ENST00000215587 RIMS1Q86UR5 1692 aaKnown RBP24.22■■□□□ 1.47
POLR2E-201ENST00000215587 SIGLEC1Q9BZZ2 1709 aa24.21■■□□□ 1.47
POLR2E-201ENST00000215587 TET3O43151 1660 aa24.21■■□□□ 1.47
POLR2E-201ENST00000215587 LMTK2Q8IWU2 1503 aa24.2■■□□□ 1.47
POLR2E-201ENST00000215587 ZEB1P37275 1124 aaPredicted RBP24.2■■□□□ 1.46
POLR2E-201ENST00000215587 HSPA2P54652 639 aa24.2■■□□□ 1.46
POLR2E-201ENST00000215587 DISP3Q9P2K9 1392 aa24.19■■□□□ 1.46
POLR2E-201ENST00000215587 ZC3H13Q5T200 1668 aaKnown RBP24.18■■□□□ 1.46
POLR2E-201ENST00000215587 WASHC2CQ9Y4E1 1318 aa24.18■■□□□ 1.46
POLR2E-201ENST00000215587 FOXD1Q16676 465 aa24.18■■□□□ 1.46
POLR2E-201ENST00000215587 ILDR2Q71H61 639 aa24.18■■□□□ 1.46
POLR2E-201ENST00000215587 PPP6R1Q9UPN7 881 aa24.18■■□□□ 1.46
POLR2E-201ENST00000215587 ABCC3O15438 1527 aa24.18■■□□□ 1.46
POLR2E-201ENST00000215587 CEP152O94986 1710 aa24.17■■□□□ 1.46
POLR2E-201ENST00000215587 EFCAB6Q5THR3 1501 aa24.15■■□□□ 1.46
POLR2E-201ENST00000215587 ANKRD30BQ9BXX2 1392 aa24.15■■□□□ 1.46
POLR2E-201ENST00000215587 MLECQ14165 292 aa24.14■■□□□ 1.45
POLR2E-201ENST00000215587 E9PCH4 1651 aa24.11■■□□□ 1.45
POLR2E-201ENST00000215587 CAMSAP1Q5T5Y3 1602 aa24.11■■□□□ 1.45
POLR2E-201ENST00000215587 RPRD2Q5VT52 1461 aaKnown RBP24.09■■□□□ 1.45
POLR2E-201ENST00000215587 ESF1Q9H501 851 aaKnown RBP24.09■■□□□ 1.45
POLR2E-201ENST00000215587 NEUROD1Q13562 356 aa24.08■■□□□ 1.45
POLR2E-201ENST00000215587 SIN3AQ96ST3 1273 aa24.08■■□□□ 1.45
POLR2E-201ENST00000215587 ARHGAP31Q2M1Z3 1444 aa24.06■■□□□ 1.44
POLR2E-201ENST00000215587 NPATQ14207 1427 aa24.05■■□□□ 1.44
POLR2E-201ENST00000215587 CLTCQ00610 1675 aaKnown RBP24.05■■□□□ 1.44
POLR2E-201ENST00000215587 CNTLNQ9NXG0 1405 aa24.04■■□□□ 1.44
POLR2E-201ENST00000215587 PLPPR3Q6T4P5 718 aa24.04■■□□□ 1.44
POLR2E-201ENST00000215587 SPHKAPQ2M3C7 1700 aa24.03■■□□□ 1.44
POLR2E-201ENST00000215587 CCDC144AA2RUR9 1427 aa24.02■■□□□ 1.44
POLR2E-201ENST00000215587 PTPRTO14522 1441 aa24.02■■□□□ 1.44
POLR2E-201ENST00000215587 TRPM2O94759 1503 aa24.02■■□□□ 1.44
POLR2E-201ENST00000215587 PLA2R1Q13018 1463 aa24.01■■□□□ 1.43
POLR2E-201ENST00000215587 TIMELESSQ9UNS1 1208 aa23.99■■□□□ 1.43
POLR2E-201ENST00000215587 TONSLQ96HA7 1378 aa23.99■■□□□ 1.43
POLR2E-201ENST00000215587 SPATA31D1Q6ZQQ2 1576 aa23.99■■□□□ 1.43
POLR2E-201ENST00000215587 MROH2AA6NES4 1674 aa23.96■■□□□ 1.43
POLR2E-201ENST00000215587 FER1L4A9Z1Z3 1794 aa23.96■■□□□ 1.43
POLR2E-201ENST00000215587 NOS1P29475 1434 aa23.94■■□□□ 1.42
POLR2E-201ENST00000215587 ZMYM3Q14202 1370 aa23.93■■□□□ 1.42
POLR2E-201ENST00000215587 PREX1Q8TCU6 1659 aa23.93■■□□□ 1.42
POLR2E-201ENST00000215587 DMRT2Q9Y5R5 561 aa23.93■■□□□ 1.42
POLR2E-201ENST00000215587 ERVK-7P63135 1459 aa23.92■■□□□ 1.42
POLR2E-201ENST00000215587 CLTCL1P53675 1640 aa23.92■■□□□ 1.42
POLR2E-201ENST00000215587 SYNMO15061 1565 aa23.88■■□□□ 1.41
POLR2E-201ENST00000215587 UGGT1Q9NYU2 1555 aa23.86■■□□□ 1.41
POLR2E-201ENST00000215587 FBXO31Q5XUX0 539 aaPredicted RBP23.86■■□□□ 1.41
POLR2E-201ENST00000215587 CFAP65Q6ZU64 1925 aaKnown RBP23.86■■□□□ 1.41
POLR2E-201ENST00000215587 STRCQ7RTU9 1775 aa23.86■■□□□ 1.41
POLR2E-201ENST00000215587 L3MBTL2Q969R5 705 aa23.84■■□□□ 1.41
POLR2E-201ENST00000215587 SLC52A1Q9NWF4 448 aa23.84■■□□□ 1.41
POLR2E-201ENST00000215587 PIK3C2BO00750 1634 aa23.84■■□□□ 1.41
POLR2E-201ENST00000215587 SPATA31E1Q6ZUB1 1445 aa23.82■■□□□ 1.4
POLR2E-201ENST00000215587 C3P01024 1663 aa23.82■■□□□ 1.4
POLR2E-201ENST00000215587 NEURL4Q96JN8 1562 aa23.82■■□□□ 1.4
POLR2E-201ENST00000215587 TNRQ92752 1358 aa23.81■■□□□ 1.4
POLR2E-201ENST00000215587 KIF1BO60333 1816 aa23.8■■□□□ 1.4
POLR2E-201ENST00000215587 UHRF1BP1Q6BDS2 1440 aa23.79■■□□□ 1.4
POLR2E-201ENST00000215587 RGL3Q3MIN7 710 aa23.79■■□□□ 1.4
POLR2E-201ENST00000215587 ADGRB3O60242 1522 aa23.79■■□□□ 1.4
POLR2E-201ENST00000215587 PPP1R15AO75807 674 aaPredicted RBP23.78■■□□□ 1.4
POLR2E-201ENST00000215587 CHGAP10645 457 aaKnown RBP23.78■■□□□ 1.4
POLR2E-201ENST00000215587 CEBPAP49715 358 aaPredicted RBP23.77■■□□□ 1.4
POLR2E-201ENST00000215587 IDI1Q13907 227 aa23.76■■□□□ 1.39
POLR2E-201ENST00000215587 IQSEC2Q5JU85 1478 aa23.75■■□□□ 1.39
POLR2E-201ENST00000215587 DCAF11Q8TEB1 546 aa23.74■■□□□ 1.39
POLR2E-201ENST00000215587 ZNF326Q5BKZ1 582 aaKnown RBP23.72■■□□□ 1.39
POLR2E-201ENST00000215587 NLRP1Q9C000 1473 aa23.72■■□□□ 1.39
POLR2E-201ENST00000215587 SETD1BQ9UPS6 1966 aaKnown RBP23.72■■□□□ 1.39
POLR2E-201ENST00000215587 STAG3Q9UJ98 1225 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms