RNA–Protein interactions for RNA: ENST00000198939.6

CHERP-201, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 5 BASIC

Gene CHERP, Length 4,084 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-201ENST00000198939 KDM5CP41229 1560 aa14.06□□□□□ -0.16
CHERP-201ENST00000198939 ADGRL2O95490 1459 aa14.06□□□□□ -0.16
CHERP-201ENST00000198939 ZMYM4Q5VZL5 1548 aa14.06□□□□□ -0.16
CHERP-201ENST00000198939 RRP7BPQ9NSQ0 103 aa14.05□□□□□ -0.16
CHERP-201ENST00000198939 ATP7AQ04656 1500 aa14.04□□□□□ -0.16
CHERP-201ENST00000198939 HECW2Q9P2P5 1572 aa14.04□□□□□ -0.16
CHERP-201ENST00000198939 NCOA1Q15788 1441 aa14.04□□□□□ -0.16
CHERP-201ENST00000198939 PPP4R2Q9NY27 417 aa14.04□□□□□ -0.16
CHERP-201ENST00000198939 KIF15Q9NS87 1388 aa14.04□□□□□ -0.16
CHERP-201ENST00000198939 SLC24A1O60721 1099 aa14.04□□□□□ -0.16
CHERP-201ENST00000198939 PPP1R15AO75807 674 aaPredicted RBP14.04□□□□□ -0.16
CHERP-201ENST00000198939 SIN3AQ96ST3 1273 aa14.03□□□□□ -0.16
CHERP-201ENST00000198939 ZFYVE16Q7Z3T8 1539 aa14.03□□□□□ -0.16
CHERP-201ENST00000198939 RICTORQ6R327 1708 aa14.03□□□□□ -0.16
CHERP-201ENST00000198939 ATP10AO60312 1499 aa14.02□□□□□ -0.16
CHERP-201ENST00000198939 CROCC2H7BZ55 1655 aa14.02□□□□□ -0.16
CHERP-201ENST00000198939 DHX29Q7Z478 1369 aaKnown RBP14.02□□□□□ -0.17
CHERP-201ENST00000198939 DUOX2Q9NRD8 1548 aa14.02□□□□□ -0.17
CHERP-201ENST00000198939 COL17A1Q9UMD9 1497 aaPredicted RBP14.01□□□□□ -0.17
CHERP-201ENST00000198939 ERICH6BQ5W0A0 696 aa14.01□□□□□ -0.17
CHERP-201ENST00000198939 CCDC136Q96JN2 1154 aa14.01□□□□□ -0.17
CHERP-201ENST00000198939 ADGBQ8N7X0 1667 aa14.01□□□□□ -0.17
CHERP-201ENST00000198939 HFM1A2PYH4 1435 aa14.01□□□□□ -0.17
CHERP-201ENST00000198939 SETD5Q9C0A6 1442 aa14.01□□□□□ -0.17
CHERP-201ENST00000198939 PLXNC1O60486 1568 aa14.01□□□□□ -0.17
CHERP-201ENST00000198939 CNGB1Q14028 1251 aaPredicted RBP14□□□□□ -0.17
CHERP-201ENST00000198939 PTPRKQ15262 1439 aa14□□□□□ -0.17
CHERP-201ENST00000198939 INO80Q9ULG1 1556 aaPredicted RBP14□□□□□ -0.17
CHERP-201ENST00000198939 DAXXQ9UER7 740 aaPredicted RBP14□□□□□ -0.17
CHERP-201ENST00000198939 ERBINQ96RT1 1412 aa13.99□□□□□ -0.17
CHERP-201ENST00000198939 A2MP01023 1474 aa13.99□□□□□ -0.17
CHERP-201ENST00000198939 ANP32AP39687 249 aaKnown RBP13.99□□□□□ -0.17
CHERP-201ENST00000198939 ANKRD50Q9ULJ7 1429 aa13.99□□□□□ -0.17
CHERP-201ENST00000198939 B4GALNT3Q6L9W6 998 aa13.98□□□□□ -0.17
CHERP-201ENST00000198939 PPP6R1Q9UPN7 881 aa13.98□□□□□ -0.17
CHERP-201ENST00000198939 FRMPD1Q5SYB0 1578 aa13.98□□□□□ -0.17
CHERP-201ENST00000198939 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.98□□□□□ -0.17
CHERP-201ENST00000198939 SALL2Q9Y467 1007 aaPredicted RBP13.98□□□□□ -0.17
CHERP-201ENST00000198939 RAB3GAP2Q9H2M9 1393 aa13.98□□□□□ -0.17
CHERP-201ENST00000198939 ARID4BQ4LE39 1312 aaPredicted RBP13.97□□□□□ -0.17
CHERP-201ENST00000198939 KANK1Q14678 1352 aa13.97□□□□□ -0.17
CHERP-201ENST00000198939 ESF1Q9H501 851 aaKnown RBP13.96□□□□□ -0.18
CHERP-201ENST00000198939 ARHGEF40Q8TER5 1519 aa13.96□□□□□ -0.18
CHERP-201ENST00000198939 NAIPQ13075 1403 aa13.96□□□□□ -0.18
CHERP-201ENST00000198939 KIDINS220Q9ULH0 1771 aa13.95□□□□□ -0.18
CHERP-201ENST00000198939 KIF3BO15066 747 aa13.95□□□□□ -0.18
CHERP-201ENST00000198939 YEATS2Q9ULM3 1422 aa13.95□□□□□ -0.18
CHERP-201ENST00000198939 ZBTB47Q9UFB7 747 aaPredicted RBP13.95□□□□□ -0.18
CHERP-201ENST00000198939 REREQ9P2R6 1566 aa13.95□□□□□ -0.18
CHERP-201ENST00000198939 DIP2CQ9Y2E4 1556 aa13.93□□□□□ -0.18
CHERP-201ENST00000198939 NPM2Q86SE8 214 aaKnown RBP13.93□□□□□ -0.18
CHERP-201ENST00000198939 AGLP35573 1532 aa13.92□□□□□ -0.18
CHERP-201ENST00000198939 PAK3O75914 559 aaPredicted RBP13.92□□□□□ -0.18
CHERP-201ENST00000198939 TIMELESSQ9UNS1 1208 aa13.91□□□□□ -0.18
CHERP-201ENST00000198939 EIF2AK4Q9P2K8 1649 aaKnown RBP13.91□□□□□ -0.18
CHERP-201ENST00000198939 ABCA6Q8N139 1617 aa13.91□□□□□ -0.18
CHERP-201ENST00000198939 GCC2Q8IWJ2 1684 aa13.91□□□□□ -0.18
CHERP-201ENST00000198939 GGT6Q6P531 493 aa13.9□□□□□ -0.18
CHERP-201ENST00000198939 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.89□□□□□ -0.19
CHERP-201ENST00000198939 NUP155O75694 1391 aa13.88□□□□□ -0.19
CHERP-201ENST00000198939 TONSLQ96HA7 1378 aa13.87□□□□□ -0.19
CHERP-201ENST00000198939 IL27Q8NEV9 243 aa13.87□□□□□ -0.19
CHERP-201ENST00000198939 FAM135AQ9P2D6 1515 aa13.87□□□□□ -0.19
CHERP-201ENST00000198939 WASHC2CQ9Y4E1 1318 aa13.87□□□□□ -0.19
CHERP-201ENST00000198939 FAM9BQ8IZU0 186 aa13.86□□□□□ -0.19
CHERP-201ENST00000198939 IPO9Q96P70 1041 aaKnown RBP13.86□□□□□ -0.19
CHERP-201ENST00000198939 CNTLNQ9NXG0 1405 aa13.85□□□□□ -0.19
CHERP-201ENST00000198939 MLECQ14165 292 aa13.85□□□□□ -0.19
CHERP-201ENST00000198939 SLC4A1APQ9BWU0 796 aaKnown RBP13.85□□□□□ -0.19
CHERP-201ENST00000198939 BCORL1Q5H9F3 1711 aa13.84□□□□□ -0.19
CHERP-201ENST00000198939 RNF17Q9BXT8 1623 aaKnown RBP13.81□□□□□ -0.2
CHERP-201ENST00000198939 MPHOSPH9Q99550 1183 aa13.81□□□□□ -0.2
CHERP-201ENST00000198939 UNC13BO14795 1591 aa13.8□□□□□ -0.2
CHERP-201ENST00000198939 KDM5DQ9BY66 1539 aa13.8□□□□□ -0.2
CHERP-201ENST00000198939 GLIPR1L2Q4G1C9 344 aa13.8□□□□□ -0.2
CHERP-201ENST00000198939 PRDM15P57071 1507 aaPredicted RBP13.79□□□□□ -0.2
CHERP-201ENST00000198939 POLR3GLQ9BT43 218 aa13.79□□□□□ -0.2
CHERP-201ENST00000198939 MRS2Q9HD23 443 aa13.78□□□□□ -0.2
CHERP-201ENST00000198939 DEPDC5O75140 1603 aa13.78□□□□□ -0.2
CHERP-201ENST00000198939 NEFMP07197 916 aa13.78□□□□□ -0.2
CHERP-201ENST00000198939 LMTK2Q8IWU2 1503 aa13.77□□□□□ -0.2
CHERP-201ENST00000198939 PKD2Q13563 968 aa13.77□□□□□ -0.21
CHERP-201ENST00000198939 ZC3H13Q5T200 1668 aaKnown RBP13.77□□□□□ -0.21
CHERP-201ENST00000198939 LAS1LQ9Y4W2 734 aaKnown RBP13.76□□□□□ -0.21
CHERP-201ENST00000198939 IQGAP3Q86VI3 1631 aa13.76□□□□□ -0.21
CHERP-201ENST00000198939 ARHGAP31Q2M1Z3 1444 aa13.75□□□□□ -0.21
CHERP-201ENST00000198939 RPRD2Q5VT52 1461 aaKnown RBP13.75□□□□□ -0.21
CHERP-201ENST00000198939 VWDEQ8N2E2 1590 aa13.74□□□□□ -0.21
CHERP-201ENST00000198939 ABCC3O15438 1527 aa13.74□□□□□ -0.21
CHERP-201ENST00000198939 ZMYM3Q14202 1370 aa13.73□□□□□ -0.21
CHERP-201ENST00000198939 TET3O43151 1660 aa13.72□□□□□ -0.21
CHERP-201ENST00000198939 PZPP20742 1482 aa13.72□□□□□ -0.21
CHERP-201ENST00000198939 UBE2Q2Q8WVN8 375 aa13.72□□□□□ -0.21
CHERP-201ENST00000198939 MROH1Q8NDA8 1641 aa13.71□□□□□ -0.21
CHERP-201ENST00000198939 SLC52A1Q9NWF4 448 aa13.7□□□□□ -0.22
CHERP-201ENST00000198939 ZBED9Q6R2W3 1325 aa13.69□□□□□ -0.22
CHERP-201ENST00000198939 EFCAB6Q5THR3 1501 aa13.69□□□□□ -0.22
CHERP-201ENST00000198939 USP35Q9P2H5 1018 aa13.69□□□□□ -0.22
CHERP-201ENST00000198939 MROH2AA6NES4 1674 aa13.69□□□□□ -0.22
CHERP-201ENST00000198939 PPM1GO15355 546 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms