RNA–Protein interactions for RNA: ENST00000027335.7

CDH17-201, Transcript of cadherin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH17, Length 3,693 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17-201ENST00000027335 POGZQ7Z3K3 1410 aa6.75□□□□□ -1.33
CDH17-201ENST00000027335 MROH2AA6NES4 1674 aa6.75□□□□□ -1.33
CDH17-201ENST00000027335 SAMD1Q6SPF0 538 aaPredicted RBP6.74□□□□□ -1.33
CDH17-201ENST00000027335 CD109Q6YHK3 1445 aa6.74□□□□□ -1.33
CDH17-201ENST00000027335 ILDR2Q71H61 639 aa6.74□□□□□ -1.33
CDH17-201ENST00000027335 ANO8Q9HCE9 1232 aaPredicted RBP6.74□□□□□ -1.33
CDH17-201ENST00000027335 SALL2Q9Y467 1007 aaPredicted RBP6.74□□□□□ -1.33
CDH17-201ENST00000027335 CTTNBP2Q8WZ74 1663 aa6.74□□□□□ -1.33
CDH17-201ENST00000027335 CASKIN1Q8WXD9 1431 aa6.74□□□□□ -1.33
CDH17-201ENST00000027335 YEATS2Q9ULM3 1422 aa6.74□□□□□ -1.33
CDH17-201ENST00000027335 DISP3Q9P2K9 1392 aa6.74□□□□□ -1.33
CDH17-201ENST00000027335 ZNF142P52746 1687 aaPredicted RBP6.73□□□□□ -1.33
CDH17-201ENST00000027335 CNKSR2Q8WXI2 1034 aa6.73□□□□□ -1.33
CDH17-201ENST00000027335 BCL11BQ9C0K0 894 aaPredicted RBP6.73□□□□□ -1.33
CDH17-201ENST00000027335 ANP32EQ9BTT0 268 aa6.73□□□□□ -1.33
CDH17-201ENST00000027335 SETD5Q9C0A6 1442 aa6.73□□□□□ -1.33
CDH17-201ENST00000027335 CDK13Q14004 1512 aaKnown RBP6.73□□□□□ -1.33
CDH17-201ENST00000027335 IRX6P78412 446 aaPredicted RBP6.73□□□□□ -1.33
CDH17-201ENST00000027335 RGL3Q3MIN7 710 aa6.72□□□□□ -1.33
CDH17-201ENST00000027335 CHGAP10645 457 aaKnown RBP6.72□□□□□ -1.33
CDH17-201ENST00000027335 HMGB1P09429 215 aaKnown RBP6.71□□□□□ -1.34
CDH17-201ENST00000027335 HSP90B1P14625 803 aaKnown RBP6.71□□□□□ -1.34
CDH17-201ENST00000027335 EIF4G2P78344 907 aaKnown RBP eCLIP6.71□□□□□ -1.34
CDH17-201ENST00000027335 FGD1P98174 961 aa6.71□□□□□ -1.34
CDH17-201ENST00000027335 NCOA2Q15596 1464 aa6.7□□□□□ -1.34
CDH17-201ENST00000027335 SETD1BQ9UPS6 1966 aaKnown RBP6.7□□□□□ -1.34
CDH17-201ENST00000027335 MED1Q15648 1581 aaPredicted RBP6.7□□□□□ -1.34
CDH17-201ENST00000027335 AGLP35573 1532 aa6.7□□□□□ -1.34
CDH17-201ENST00000027335 CCDC18Q5T9S5 1454 aa6.7□□□□□ -1.34
CDH17-201ENST00000027335 FYCO1Q9BQS8 1478 aa6.7□□□□□ -1.34
CDH17-201ENST00000027335 MRS2Q9HD23 443 aa6.7□□□□□ -1.34
CDH17-201ENST00000027335 FGD6Q6ZV73 1430 aa6.7□□□□□ -1.34
CDH17-201ENST00000027335 TIAM1Q13009 1591 aa6.7□□□□□ -1.34
CDH17-201ENST00000027335 DHX57Q6P158 1386 aaKnown RBP6.69□□□□□ -1.34
CDH17-201ENST00000027335 AKNAQ7Z591 1439 aa6.69□□□□□ -1.34
CDH17-201ENST00000027335 CLSPNQ9HAW4 1339 aa6.69□□□□□ -1.34
CDH17-201ENST00000027335 ZFYVE16Q7Z3T8 1539 aa6.68□□□□□ -1.34
CDH17-201ENST00000027335 PLA2R1Q13018 1463 aa6.68□□□□□ -1.34
CDH17-201ENST00000027335 MPHOSPH9Q99550 1183 aa6.68□□□□□ -1.34
CDH17-201ENST00000027335 MYOM3Q5VTT5 1437 aa6.68□□□□□ -1.34
CDH17-201ENST00000027335 FAM135AQ9P2D6 1515 aa6.67□□□□□ -1.34
CDH17-201ENST00000027335 PKD2Q13563 968 aa6.67□□□□□ -1.34
CDH17-201ENST00000027335 EFCAB2Q5VUJ9 269 aa6.67□□□□□ -1.34
CDH17-201ENST00000027335 RRBP1Q9P2E9 1410 aaKnown RBP6.66□□□□□ -1.34
CDH17-201ENST00000027335 VSIG10Q8N0Z9 540 aa6.66□□□□□ -1.34
CDH17-201ENST00000027335 TMC1Q8TDI8 760 aa6.66□□□□□ -1.34
CDH17-201ENST00000027335 RNF39Q9H2S5 420 aa6.66□□□□□ -1.34
CDH17-201ENST00000027335 NPATQ14207 1427 aa6.66□□□□□ -1.34
CDH17-201ENST00000027335 GGT6Q6P531 493 aa6.65□□□□□ -1.34
CDH17-201ENST00000027335 CPS1P31327 1500 aa6.65□□□□□ -1.34
CDH17-201ENST00000027335 MLECQ14165 292 aa6.65□□□□□ -1.34
CDH17-201ENST00000027335 AFAP1Q8N556 730 aa6.65□□□□□ -1.34
CDH17-201ENST00000027335 SIGLEC1Q9BZZ2 1709 aa6.65□□□□□ -1.34
CDH17-201ENST00000027335 NUP155O75694 1391 aa6.65□□□□□ -1.35
CDH17-201ENST00000027335 NCOA1Q15788 1441 aa6.64□□□□□ -1.35
CDH17-201ENST00000027335 KDM5CP41229 1560 aa6.64□□□□□ -1.35
CDH17-201ENST00000027335 DENND4BO75064 1496 aaPredicted RBP6.63□□□□□ -1.35
CDH17-201ENST00000027335 SAMD9Q5K651 1589 aa6.63□□□□□ -1.35
CDH17-201ENST00000027335 PPP1R15AO75807 674 aaPredicted RBP6.63□□□□□ -1.35
CDH17-201ENST00000027335 KIF3BO15066 747 aa6.63□□□□□ -1.35
CDH17-201ENST00000027335 CCDC136Q96JN2 1154 aa6.63□□□□□ -1.35
CDH17-201ENST00000027335 TROQ12816 1431 aaPredicted RBP6.62□□□□□ -1.35
CDH17-201ENST00000027335 C9orf84Q5VXU9 1444 aa6.62□□□□□ -1.35
CDH17-201ENST00000027335 CNTLNQ9NXG0 1405 aa6.62□□□□□ -1.35
CDH17-201ENST00000027335 ANKRD30AQ9BXX3 1397 aa6.62□□□□□ -1.35
CDH17-201ENST00000027335 C3P01024 1663 aa6.62□□□□□ -1.35
CDH17-201ENST00000027335 DCAF11Q8TEB1 546 aa6.62□□□□□ -1.35
CDH17-201ENST00000027335 SUPT16HQ9Y5B9 1047 aaKnown RBP6.62□□□□□ -1.35
CDH17-201ENST00000027335 SPAG9O60271 1321 aaKnown RBP6.62□□□□□ -1.35
CDH17-201ENST00000027335 SYNMO15061 1565 aa6.62□□□□□ -1.35
CDH17-201ENST00000027335 HSPA5P11021 654 aaKnown RBP6.62□□□□□ -1.35
CDH17-201ENST00000027335 L3MBTL2Q969R5 705 aa6.62□□□□□ -1.35
CDH17-201ENST00000027335 CARD11Q9BXL7 1154 aa6.62□□□□□ -1.35
CDH17-201ENST00000027335 NUP153P49790 1475 aaKnown RBP6.61□□□□□ -1.35
CDH17-201ENST00000027335 HECW1Q76N89 1606 aa6.61□□□□□ -1.35
CDH17-201ENST00000027335 UHRF1BP1Q6BDS2 1440 aa6.61□□□□□ -1.35
CDH17-201ENST00000027335 ARID4BQ4LE39 1312 aaPredicted RBP6.61□□□□□ -1.35
CDH17-201ENST00000027335 PTPRKQ15262 1439 aa6.61□□□□□ -1.35
CDH17-201ENST00000027335 ESF1Q9H501 851 aaKnown RBP6.61□□□□□ -1.35
CDH17-201ENST00000027335 ATP10AO60312 1499 aa6.6□□□□□ -1.35
CDH17-201ENST00000027335 STAG3Q9UJ98 1225 aa6.6□□□□□ -1.35
CDH17-201ENST00000027335 EHBP1L1Q8N3D4 1523 aa6.6□□□□□ -1.35
CDH17-201ENST00000027335 BCCIPQ9P287 314 aaKnown RBP eCLIP6.6□□□□□ -1.35
CDH17-201ENST00000027335 RAPGEF6Q8TEU7 1601 aa6.6□□□□□ -1.35
CDH17-201ENST00000027335 ATP10BO94823 1461 aa6.59□□□□□ -1.35
CDH17-201ENST00000027335 TCOF1Q13428 1488 aaKnown RBP6.59□□□□□ -1.35
CDH17-201ENST00000027335 A0A0U1RQG5 324 aaPredicted RBP6.59□□□□□ -1.35
CDH17-201ENST00000027335 NAP1L5Q96NT1 182 aaPredicted RBP6.59□□□□□ -1.35
CDH17-201ENST00000027335 RAPGEF3O95398 923 aa6.58□□□□□ -1.36
CDH17-201ENST00000027335 GLIPR1L2Q4G1C9 344 aa6.58□□□□□ -1.36
CDH17-201ENST00000027335 NUTM2DQ5VT03 806 aaPredicted RBP6.58□□□□□ -1.36
CDH17-201ENST00000027335 POLR1AO95602 1720 aaPredicted RBP6.58□□□□□ -1.36
CDH17-201ENST00000027335 DEPDC5O75140 1603 aa6.58□□□□□ -1.36
CDH17-201ENST00000027335 KIF15Q9NS87 1388 aa6.58□□□□□ -1.36
CDH17-201ENST00000027335 IGSF3O75054 1194 aa6.58□□□□□ -1.36
CDH17-201ENST00000027335 SUPT6HQ7KZ85 1726 aaKnown RBP6.58□□□□□ -1.36
CDH17-201ENST00000027335 ARHGAP5Q13017 1502 aa6.58□□□□□ -1.36
CDH17-201ENST00000027335 CCDC9Q9Y3X0 531 aaKnown RBP6.57□□□□□ -1.36
CDH17-201ENST00000027335 NAIPQ13075 1403 aa6.57□□□□□ -1.36
CDH17-201ENST00000027335 MAP3K1Q13233 1512 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms