RNA–Protein interactions for RNA: ENST00000009180.8

CD9-201, Transcript of CD9 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD9, Length 1,169 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-201ENST00000009180 EIF2AK4Q9P2K8 1649 aaKnown RBP15.21■□□□□ 0.02
CD9-201ENST00000009180 ANKRD50Q9ULJ7 1429 aa15.2■□□□□ 0.02
CD9-201ENST00000009180 GCC2Q8IWJ2 1684 aa15.2■□□□□ 0.02
CD9-201ENST00000009180 MSH5O43196 834 aa15.19■□□□□ 0.02
CD9-201ENST00000009180 HFM1A2PYH4 1435 aa15.18■□□□□ 0.02
CD9-201ENST00000009180 MROH1Q8NDA8 1641 aa15.18■□□□□ 0.02
CD9-201ENST00000009180 GGT6Q6P531 493 aa15.18■□□□□ 0.02
CD9-201ENST00000009180 MADDQ8WXG6 1647 aa15.17■□□□□ 0.02
CD9-201ENST00000009180 RNF17Q9BXT8 1623 aaKnown RBP15.17■□□□□ 0.02
CD9-201ENST00000009180 ADAMTSL3P82987 1691 aa15.17■□□□□ 0.02
CD9-201ENST00000009180 TRIM26Q12899 539 aaPredicted RBP15.17■□□□□ 0.02
CD9-201ENST00000009180 KDM4FA0A1W2PPD8 638 aa15.15■□□□□ 0.02
CD9-201ENST00000009180 DEPDC5O75140 1603 aa15.14■□□□□ 0.01
CD9-201ENST00000009180 PRDM15P57071 1507 aaPredicted RBP15.14■□□□□ 0.01
CD9-201ENST00000009180 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.14■□□□□ 0.01
CD9-201ENST00000009180 FER1L4A9Z1Z3 1794 aa15.13■□□□□ 0.01
CD9-201ENST00000009180 RIMS1Q86UR5 1692 aaKnown RBP15.12■□□□□ 0.01
CD9-201ENST00000009180 UNC13BO14795 1591 aa15.12■□□□□ 0.01
CD9-201ENST00000009180 SETD5Q9C0A6 1442 aa15.12■□□□□ 0.01
CD9-201ENST00000009180 CLTCQ00610 1675 aaKnown RBP15.11■□□□□ 0.01
CD9-201ENST00000009180 KDM5DQ9BY66 1539 aa15.11■□□□□ 0.01
CD9-201ENST00000009180 CEP152O94986 1710 aa15.1■□□□□ 0.01
CD9-201ENST00000009180 ABCC3O15438 1527 aa15.1■□□□□ 0.01
CD9-201ENST00000009180 RAB3GAP2Q9H2M9 1393 aa15.1■□□□□ 0.01
CD9-201ENST00000009180 VWDEQ8N2E2 1590 aa15.08■□□□□ 0
CD9-201ENST00000009180 ESF1Q9H501 851 aaKnown RBP15.07■□□□□ 0
CD9-201ENST00000009180 WASHC2CQ9Y4E1 1318 aa15.07■□□□□ 0
CD9-201ENST00000009180 ZC3H13Q5T200 1668 aaKnown RBP15.06■□□□□ 0
CD9-201ENST00000009180 NUP155O75694 1391 aa15.06■□□□□ 0
CD9-201ENST00000009180 KANK1Q14678 1352 aa15.06■□□□□ 0
CD9-201ENST00000009180 CNTLNQ9NXG0 1405 aa15.06■□□□□ 0
CD9-201ENST00000009180 PTPRMP28827 1452 aa15.06■□□□□ 0
CD9-201ENST00000009180 FAM135AQ9P2D6 1515 aa15.06■□□□□ 0
CD9-201ENST00000009180 CEBPAP49715 358 aaPredicted RBP15.05■□□□□ -0
CD9-201ENST00000009180 CAMSAP1Q5T5Y3 1602 aa15.05■□□□□ -0
CD9-201ENST00000009180 IQGAP3Q86VI3 1631 aa15.05■□□□□ -0
CD9-201ENST00000009180 MROH2AA6NES4 1674 aa15.04■□□□□ -0
CD9-201ENST00000009180 C3P01024 1663 aa15.04■□□□□ -0
CD9-201ENST00000009180 LMTK2Q8IWU2 1503 aa15.04■□□□□ -0
CD9-201ENST00000009180 TRIM52Q96A61 297 aa15.04■□□□□ -0
CD9-201ENST00000009180 PCGF6Q9BYE7 350 aa15.04■□□□□ -0
CD9-201ENST00000009180 PZPP20742 1482 aa15.03■□□□□ -0
CD9-201ENST00000009180 ZMYM3Q14202 1370 aa15.03■□□□□ -0
CD9-201ENST00000009180 EFCAB6Q5THR3 1501 aa15.02■□□□□ -0
CD9-201ENST00000009180 TET3O43151 1660 aa15.01□□□□□ -0.01
CD9-201ENST00000009180 NPATQ14207 1427 aa15□□□□□ -0.01
CD9-201ENST00000009180 FBXO31Q5XUX0 539 aaPredicted RBP14.99□□□□□ -0.01
CD9-201ENST00000009180 E9PCH4 1651 aa14.97□□□□□ -0.01
CD9-201ENST00000009180 ARHGAP31Q2M1Z3 1444 aa14.97□□□□□ -0.01
CD9-201ENST00000009180 ERVK-7P63135 1459 aa14.96□□□□□ -0.01
CD9-201ENST00000009180 SLC4A1APQ9BWU0 796 aaKnown RBP14.95□□□□□ -0.02
CD9-201ENST00000009180 PREX1Q8TCU6 1659 aa14.95□□□□□ -0.02
CD9-201ENST00000009180 PKD2Q13563 968 aa14.94□□□□□ -0.02
CD9-201ENST00000009180 SPATA31D1Q6ZQQ2 1576 aa14.94□□□□□ -0.02
CD9-201ENST00000009180 HRCP23327 699 aa14.93□□□□□ -0.02
CD9-201ENST00000009180 MPHOSPH9Q99550 1183 aa14.93□□□□□ -0.02
CD9-201ENST00000009180 TNRQ92752 1358 aa14.93□□□□□ -0.02
CD9-201ENST00000009180 SYNMO15061 1565 aa14.93□□□□□ -0.02
CD9-201ENST00000009180 RPRD2Q5VT52 1461 aaKnown RBP14.92□□□□□ -0.02
CD9-201ENST00000009180 MYO3AQ8NEV4 1616 aa14.91□□□□□ -0.02
CD9-201ENST00000009180 NOS1P29475 1434 aa14.91□□□□□ -0.02
CD9-201ENST00000009180 UGGT1Q9NYU2 1555 aa14.9□□□□□ -0.02
CD9-201ENST00000009180 CFAP65Q6ZU64 1925 aaKnown RBP14.9□□□□□ -0.02
CD9-201ENST00000009180 SPHKAPQ2M3C7 1700 aa14.89□□□□□ -0.03
CD9-201ENST00000009180 PLA2R1Q13018 1463 aa14.89□□□□□ -0.03
CD9-201ENST00000009180 ACIN1Q9UKV3 1341 aaKnown RBP14.88□□□□□ -0.03
CD9-201ENST00000009180 PTPRTO14522 1441 aa14.87□□□□□ -0.03
CD9-201ENST00000009180 TRPM2O94759 1503 aa14.87□□□□□ -0.03
CD9-201ENST00000009180 UHRF1BP1Q6BDS2 1440 aa14.86□□□□□ -0.03
CD9-201ENST00000009180 DHX57Q6P158 1386 aaKnown RBP14.85□□□□□ -0.03
CD9-201ENST00000009180 CEP170BQ9Y4F5 1589 aaPredicted RBP14.85□□□□□ -0.03
CD9-201ENST00000009180 LMTK3Q96Q04 1460 aa14.85□□□□□ -0.03
CD9-201ENST00000009180 PIK3C2BO00750 1634 aa14.84□□□□□ -0.03
CD9-201ENST00000009180 CLTCL1P53675 1640 aa14.84□□□□□ -0.03
CD9-201ENST00000009180 ZNF142P52746 1687 aaPredicted RBP14.84□□□□□ -0.03
CD9-201ENST00000009180 NLRP1Q9C000 1473 aa14.84□□□□□ -0.03
CD9-201ENST00000009180 SLC24A1O60721 1099 aa14.84□□□□□ -0.03
CD9-201ENST00000009180 A2ML1A8K2U0 1454 aa14.83□□□□□ -0.03
CD9-201ENST00000009180 IDI1Q13907 227 aa14.82□□□□□ -0.04
CD9-201ENST00000009180 ADGRB3O60242 1522 aa14.82□□□□□ -0.04
CD9-201ENST00000009180 HSPA2P54652 639 aa14.81□□□□□ -0.04
CD9-201ENST00000009180 ANKRD30BQ9BXX2 1392 aa14.8□□□□□ -0.04
CD9-201ENST00000009180 UBR1Q8IWV7 1749 aa14.8□□□□□ -0.04
CD9-201ENST00000009180 CHGAP10645 457 aaKnown RBP14.79□□□□□ -0.04
CD9-201ENST00000009180 SLC52A1Q9NWF4 448 aa14.79□□□□□ -0.04
CD9-201ENST00000009180 CCDC144AA2RUR9 1427 aa14.78□□□□□ -0.04
CD9-201ENST00000009180 TMEM131LA2VDJ0 1609 aa14.77□□□□□ -0.04
CD9-201ENST00000009180 SETD1BQ9UPS6 1966 aaKnown RBP14.77□□□□□ -0.04
CD9-201ENST00000009180 STAG3Q9UJ98 1225 aa14.76□□□□□ -0.05
CD9-201ENST00000009180 MYO5BQ9ULV0 1848 aa14.76□□□□□ -0.05
CD9-201ENST00000009180 KDM5AP29375 1690 aaKnown RBP14.73□□□□□ -0.05
CD9-201ENST00000009180 KIF1BO60333 1816 aa14.72□□□□□ -0.05
CD9-201ENST00000009180 SIN3AQ96ST3 1273 aa14.72□□□□□ -0.05
CD9-201ENST00000009180 SPATA31E1Q6ZUB1 1445 aa14.72□□□□□ -0.05
CD9-201ENST00000009180 ARHGAP23Q9P227 1491 aa14.71□□□□□ -0.05
CD9-201ENST00000009180 THEMISQ8N1K5 641 aaPredicted RBP14.71□□□□□ -0.05
CD9-201ENST00000009180 TMEM2Q9UHN6 1383 aa14.71□□□□□ -0.06
CD9-201ENST00000009180 SLIT1O75093 1534 aa14.71□□□□□ -0.06
CD9-201ENST00000009180 RIMS2Q9UQ26 1411 aa14.7□□□□□ -0.06
CD9-201ENST00000009180 RGL3Q3MIN7 710 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms