RNA–Protein interactions for RNA: ENSMUST00000100640.4

Sqle-202, Transcript of Squalene monooxygenase, mousemouse

TSL 1 (best) BASIC

Gene Sqle, Length 2,636 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqle-202ENSMUST00000100640 Kif21bQ9QXL1 1668 aa16.13■□□□□ 0.17
Sqle-202ENSMUST00000100640 Mbd3Q9Z2D8 285 aaKnown RBP16.13■□□□□ 0.17
Sqle-202ENSMUST00000100640 Kdm3bQ6ZPY7 1562 aa16.13■□□□□ 0.17
Sqle-202ENSMUST00000100640 Cc2d2bA0A286YDU8 1405 aa16.13■□□□□ 0.17
Sqle-202ENSMUST00000100640 Mre11Q61216 706 aa16.13■□□□□ 0.17
Sqle-202ENSMUST00000100640 Cdk13Q69ZA1 1511 aaKnown RBP16.12■□□□□ 0.17
Sqle-202ENSMUST00000100640 RalgapbQ8BQZ4 1484 aa16.12■□□□□ 0.17
Sqle-202ENSMUST00000100640 Adgrb2Q8CGM1 1561 aa16.11■□□□□ 0.17
Sqle-202ENSMUST00000100640 Dbr1Q923B1 550 aa16.11■□□□□ 0.17
Sqle-202ENSMUST00000100640 Ncoa3O09000 1398 aa16.11■□□□□ 0.17
Sqle-202ENSMUST00000100640 Kdm6bQ5NCY0 1641 aa16.1■□□□□ 0.17
Sqle-202ENSMUST00000100640 Pknox2Q8BG99 474 aa16.1■□□□□ 0.17
Sqle-202ENSMUST00000100640 EspnQ9ET47 871 aa16.1■□□□□ 0.17
Sqle-202ENSMUST00000100640 NudcO35685 332 aaKnown RBP16.09■□□□□ 0.17
Sqle-202ENSMUST00000100640 Wdr7Q920I9 1489 aa16.08■□□□□ 0.17
Sqle-202ENSMUST00000100640 Ppm1gQ61074 542 aa16.08■□□□□ 0.16
Sqle-202ENSMUST00000100640 Chmp5Q9D7S9 219 aa16.06■□□□□ 0.16
Sqle-202ENSMUST00000100640 Kdm2bQ6P1G2 1309 aa16.06■□□□□ 0.16
Sqle-202ENSMUST00000100640 Zbtb4Q5F293 982 aa16.06■□□□□ 0.16
Sqle-202ENSMUST00000100640 DroshaQ5HZJ0 1373 aaKnown RBP16.06■□□□□ 0.16
Sqle-202ENSMUST00000100640 Zmym4A2A791 1549 aaKnown RBP16.05■□□□□ 0.16
Sqle-202ENSMUST00000100640 Cpsf1Q9EPU4 1441 aaKnown RBP16.04■□□□□ 0.16
Sqle-202ENSMUST00000100640 Soga1E1U8D0 1418 aa16.04■□□□□ 0.16
Sqle-202ENSMUST00000100640 Supt6hQ62383 1726 aaKnown RBP16.04■□□□□ 0.16
Sqle-202ENSMUST00000100640 Nup155Q99P88 1391 aaKnown RBP16.02■□□□□ 0.16
Sqle-202ENSMUST00000100640 Ak9G3UYQ4 1894 aa16.02■□□□□ 0.15
Sqle-202ENSMUST00000100640 WrnO09053 1401 aa16.02■□□□□ 0.15
Sqle-202ENSMUST00000100640 Adcy10Q8C0T9 1614 aa16.02■□□□□ 0.15
Sqle-202ENSMUST00000100640 Polr3aB2RXC6 1390 aa16.02■□□□□ 0.15
Sqle-202ENSMUST00000100640 Rwdd1Q9CQK7 243 aa16.01■□□□□ 0.15
Sqle-202ENSMUST00000100640 WizO88286 1684 aaKnown RBP16.01■□□□□ 0.15
Sqle-202ENSMUST00000100640 Asxl1P59598 1514 aa16.01■□□□□ 0.15
Sqle-202ENSMUST00000100640 Esx1O88933 382 aa16■□□□□ 0.15
Sqle-202ENSMUST00000100640 Kif16bB1AVY7 1312 aa16■□□□□ 0.15
Sqle-202ENSMUST00000100640 Mroh3A0A1D5RM54 893 aa15.99■□□□□ 0.15
Sqle-202ENSMUST00000100640 Pdlim2Q8R1G6 349 aa15.99■□□□□ 0.15
Sqle-202ENSMUST00000100640 Kcnn1Q9EQR3 537 aa15.99■□□□□ 0.15
Sqle-202ENSMUST00000100640 Ttc41Q692V3 1318 aa15.99■□□□□ 0.15
Sqle-202ENSMUST00000100640 Rock1P70335 1354 aa15.99■□□□□ 0.15
Sqle-202ENSMUST00000100640 CrbnQ8C7D2 445 aa15.99■□□□□ 0.15
Sqle-202ENSMUST00000100640 Pank3Q8R2W9 370 aa15.99■□□□□ 0.15
Sqle-202ENSMUST00000100640 Map4P27546 1125 aaKnown RBP15.98■□□□□ 0.15
Sqle-202ENSMUST00000100640 Abca16E9PWJ7 1678 aa15.97■□□□□ 0.15
Sqle-202ENSMUST00000100640 Adamts12Q811B3 1600 aa15.97■□□□□ 0.15
Sqle-202ENSMUST00000100640 Gapvd1Q6PAR5 1458 aa15.97■□□□□ 0.15
Sqle-202ENSMUST00000100640 Eif2s2Q99L45 331 aaKnown RBP15.97■□□□□ 0.15
Sqle-202ENSMUST00000100640 Inpp5dQ9ES52 1191 aa15.97■□□□□ 0.15
Sqle-202ENSMUST00000100640 Pdcl3Q8BVF2 240 aa15.96■□□□□ 0.15
Sqle-202ENSMUST00000100640 Rapgef6Q5NCJ1 1609 aa15.96■□□□□ 0.14
Sqle-202ENSMUST00000100640 Smc5Q8CG46 1101 aaKnown RBP15.96■□□□□ 0.14
Sqle-202ENSMUST00000100640 Apbb1Q9QXJ1 710 aa15.96■□□□□ 0.14
Sqle-202ENSMUST00000100640 PxdnQ3UQ28 1475 aa15.95■□□□□ 0.14
Sqle-202ENSMUST00000100640 Trim30dE9PWL0 497 aa15.95■□□□□ 0.14
Sqle-202ENSMUST00000100640 Arid4bA2CG63 1314 aaKnown RBP15.95■□□□□ 0.14
Sqle-202ENSMUST00000100640 PrxO55103 1391 aa15.94■□□□□ 0.14
Sqle-202ENSMUST00000100640 Ipo8Q7TMY7 1010 aa15.94■□□□□ 0.14
Sqle-202ENSMUST00000100640 Kdm5cP41230 1554 aa15.94■□□□□ 0.14
Sqle-202ENSMUST00000100640 Hsp90ab1P11499 724 aaKnown RBP15.94■□□□□ 0.14
Sqle-202ENSMUST00000100640 Shroom2A2ALU4 1481 aa15.93■□□□□ 0.14
Sqle-202ENSMUST00000100640 Mapk8ip3Q9ESN9 1337 aa15.93■□□□□ 0.14
Sqle-202ENSMUST00000100640 Trpm2Q91YD4 1506 aa15.93■□□□□ 0.14
Sqle-202ENSMUST00000100640 Plekhh1Q80TI1 1356 aa15.93■□□□□ 0.14
Sqle-202ENSMUST00000100640 Zmym3Q9JLM4 1370 aa15.93■□□□□ 0.14
Sqle-202ENSMUST00000100640 Ak7Q9D2H2 614 aa15.93■□□□□ 0.14
Sqle-202ENSMUST00000100640 Abcc2Q8VI47 1543 aa15.92■□□□□ 0.14
Sqle-202ENSMUST00000100640 Zscan10Q3URR7 782 aa15.92■□□□□ 0.14
Sqle-202ENSMUST00000100640 Arhgap31A6X8Z5 1425 aa15.91■□□□□ 0.14
Sqle-202ENSMUST00000100640 Tex14Q7M6U3 1450 aa15.91■□□□□ 0.14
Sqle-202ENSMUST00000100640 Fgd6Q69ZL1 1399 aa15.91■□□□□ 0.14
Sqle-202ENSMUST00000100640 AU015836B2RUM3 263 aa15.91■□□□□ 0.14
Sqle-202ENSMUST00000100640 Tubgcp6G5E8P0 1769 aa15.91■□□□□ 0.14
Sqle-202ENSMUST00000100640 Dcaf11Q91VU6 549 aa15.9■□□□□ 0.14
Sqle-202ENSMUST00000100640 Iqgap1Q9JKF1 1657 aaKnown RBP15.9■□□□□ 0.14
Sqle-202ENSMUST00000100640 Arhgef11Q68FM7 1552 aa15.9■□□□□ 0.14
Sqle-202ENSMUST00000100640 Cdc42bpaQ3UU96 1719 aa15.9■□□□□ 0.14
Sqle-202ENSMUST00000100640 Plch2A2AP18 1501 aa15.89■□□□□ 0.13
Sqle-202ENSMUST00000100640 4930567H17RikQ3V0K5 233 aa15.89■□□□□ 0.13
Sqle-202ENSMUST00000100640 Ccdc141E9Q8Q6 1531 aa15.89■□□□□ 0.13
Sqle-202ENSMUST00000100640 Dot1lQ6XZL8 1540 aa15.89■□□□□ 0.13
Sqle-202ENSMUST00000100640 Kiaa1551Q5DTW7 1521 aa15.88■□□□□ 0.13
Sqle-202ENSMUST00000100640 Tdrd9Q14BI7 1383 aa15.88■□□□□ 0.13
Sqle-202ENSMUST00000100640 Tmf1B9EKI3 1091 aa15.88■□□□□ 0.13
Sqle-202ENSMUST00000100640 Htatsf1Q8BGC0 757 aa15.88■□□□□ 0.13
Sqle-202ENSMUST00000100640 Setd1aE9PYH6 1716 aa15.88■□□□□ 0.13
Sqle-202ENSMUST00000100640 Ppp1r9bQ6R891 817 aaKnown RBP15.87■□□□□ 0.13
Sqle-202ENSMUST00000100640 Zbtb7cQ8VCZ7 619 aa15.87■□□□□ 0.13
Sqle-202ENSMUST00000100640 Tarbp1E9Q368 1579 aa15.87■□□□□ 0.13
Sqle-202ENSMUST00000100640 Gtf2a1Q99PM3 378 aa15.86■□□□□ 0.13
Sqle-202ENSMUST00000100640 Ppp2r1aQ76MZ3 589 aa15.86■□□□□ 0.13
Sqle-202ENSMUST00000100640 Dnmt1P13864 1620 aaKnown RBP15.85■□□□□ 0.13
Sqle-202ENSMUST00000100640 Pabpn1Q8CCS6 302 aaKnown RBP15.85■□□□□ 0.13
Sqle-202ENSMUST00000100640 Tmc1Q8R4P5 757 aa15.85■□□□□ 0.13
Sqle-202ENSMUST00000100640 AknaQ80VW7 1404 aa15.85■□□□□ 0.13
Sqle-202ENSMUST00000100640 Ccdc183A2AJB1 534 aa15.85■□□□□ 0.13
Sqle-202ENSMUST00000100640 ArxO35085 564 aa15.85■□□□□ 0.13
Sqle-202ENSMUST00000100640 Speer4f1Q9D5Q6 258 aa15.85■□□□□ 0.13
Sqle-202ENSMUST00000100640 Ifit1bl1D3Z6F0 470 aa15.84■□□□□ 0.13
Sqle-202ENSMUST00000100640 Clasp1Q80TV8 1535 aaKnown RBP15.83■□□□□ 0.13
Sqle-202ENSMUST00000100640 Gm6268A2A3U9 297 aa15.83■□□□□ 0.12
Sqle-202ENSMUST00000100640 PtprgQ05909 1442 aa15.83■□□□□ 0.12
Retrieved 100 of 22,080 RNA–protein pairs in 21.2 ms