RNA–Protein interactions for RNA: ENSMUST00000033012.8

Copb1-201, Transcript of Coatomer subunit beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Copb1, Length 3,346 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1-201ENSMUST00000033012 Gm1043A0A140LJC2 1431 aa12.9□□□□□ -0.34
Copb1-201ENSMUST00000033012 Ube2uB1AUC4 352 aa12.9□□□□□ -0.34
Copb1-201ENSMUST00000033012 Gm6268A2A3U9 297 aa12.9□□□□□ -0.35
Copb1-201ENSMUST00000033012 Mug1P28665 1476 aa12.89□□□□□ -0.35
Copb1-201ENSMUST00000033012 Zscan21Q07231 555 aa12.89□□□□□ -0.35
Copb1-201ENSMUST00000033012 Gm14025A2AP89 1413 aa12.89□□□□□ -0.35
Copb1-201ENSMUST00000033012 Ccdc183A2AJB1 534 aa12.88□□□□□ -0.35
Copb1-201ENSMUST00000033012 Zmym4A2A791 1549 aaKnown RBP12.88□□□□□ -0.35
Copb1-201ENSMUST00000033012 Trim30dE9PWL0 497 aa12.88□□□□□ -0.35
Copb1-201ENSMUST00000033012 Pik3c2gO70167 1506 aa12.88□□□□□ -0.35
Copb1-201ENSMUST00000033012 CadpsQ80TJ1 1355 aa12.88□□□□□ -0.35
Copb1-201ENSMUST00000033012 Rpgrip1lQ8CG73 1264 aa12.87□□□□□ -0.35
Copb1-201ENSMUST00000033012 LrpprcQ6PB66 1392 aaKnown RBP12.87□□□□□ -0.35
Copb1-201ENSMUST00000033012 Sptbn5F6UCX4 1208 aa12.87□□□□□ -0.35
Copb1-201ENSMUST00000033012 Pdia4P08003 638 aaKnown RBP12.87□□□□□ -0.35
Copb1-201ENSMUST00000033012 Tnnt2P50752 301 aa12.87□□□□□ -0.35
Copb1-201ENSMUST00000033012 Ythdc1E9Q5K9 736 aaKnown RBP12.85□□□□□ -0.35
Copb1-201ENSMUST00000033012 Trim44Q9QXA7 346 aa12.85□□□□□ -0.35
Copb1-201ENSMUST00000033012 Gse1Q3U3C9 1213 aa12.85□□□□□ -0.35
Copb1-201ENSMUST00000033012 Dapk1Q80YE7 1442 aa12.85□□□□□ -0.35
Copb1-201ENSMUST00000033012 Erbb4Q61527 1308 aa12.84□□□□□ -0.35
Copb1-201ENSMUST00000033012 Rfx7F8VPJ6 1459 aa12.84□□□□□ -0.35
Copb1-201ENSMUST00000033012 Trim26Q99PN3 545 aa12.84□□□□□ -0.35
Copb1-201ENSMUST00000033012 Dhx16G3X8X0 1044 aaKnown RBP12.84□□□□□ -0.35
Copb1-201ENSMUST00000033012 Pkd2O35245 966 aa12.83□□□□□ -0.36
Copb1-201ENSMUST00000033012 Urb2E9Q7L1 1524 aaKnown RBP12.83□□□□□ -0.36
Copb1-201ENSMUST00000033012 Clasp1Q80TV8 1535 aaKnown RBP12.83□□□□□ -0.36
Copb1-201ENSMUST00000033012 Lamc1P02468 1607 aaKnown RBP12.83□□□□□ -0.36
Copb1-201ENSMUST00000033012 Ssh1Q76I79 1042 aa12.82□□□□□ -0.36
Copb1-201ENSMUST00000033012 Lmtk2Q3TYD6 1471 aa12.81□□□□□ -0.36
Copb1-201ENSMUST00000033012 Dnajc14Q921R4 703 aa12.81□□□□□ -0.36
Copb1-201ENSMUST00000033012 Rwdd1Q9CQK7 243 aa12.81□□□□□ -0.36
Copb1-201ENSMUST00000033012 VgfQ0VGU4 617 aa12.81□□□□□ -0.36
Copb1-201ENSMUST00000033012 Rad21Q61550 635 aaKnown RBP12.81□□□□□ -0.36
Copb1-201ENSMUST00000033012 Chic2Q9D9G3 165 aa12.8□□□□□ -0.36
Copb1-201ENSMUST00000033012 Iqgap2Q3UQ44 1575 aa12.8□□□□□ -0.36
Copb1-201ENSMUST00000033012 Mug2P28666 1451 aa12.8□□□□□ -0.36
Copb1-201ENSMUST00000033012 4930567H17RikQ3V0K5 233 aa12.8□□□□□ -0.36
Copb1-201ENSMUST00000033012 Tubgcp6G5E8P0 1769 aa12.79□□□□□ -0.36
Copb1-201ENSMUST00000033012 Tshz2Q68FE9 1030 aa12.79□□□□□ -0.36
Copb1-201ENSMUST00000033012 Pdcl2Q78Y63 240 aa12.79□□□□□ -0.36
Copb1-201ENSMUST00000033012 Plekhh1Q80TI1 1356 aa12.79□□□□□ -0.36
Copb1-201ENSMUST00000033012 Dcaf11Q91VU6 549 aa12.79□□□□□ -0.36
Copb1-201ENSMUST00000033012 Tnpo1Q8BFY9 898 aaKnown RBP12.78□□□□□ -0.36
Copb1-201ENSMUST00000033012 Gys2Q8VCB3 704 aa12.78□□□□□ -0.36
Copb1-201ENSMUST00000033012 Frmpd1A2AKB4 1549 aa12.78□□□□□ -0.36
Copb1-201ENSMUST00000033012 Rabep1O35551 862 aa12.77□□□□□ -0.36
Copb1-201ENSMUST00000033012 Mknk2Q8CDB0 459 aa12.77□□□□□ -0.37
Copb1-201ENSMUST00000033012 Lamc3Q9R0B6 1581 aa12.76□□□□□ -0.37
Copb1-201ENSMUST00000033012 Kif16bB1AVY7 1312 aa12.76□□□□□ -0.37
Copb1-201ENSMUST00000033012 SlkO54988 1233 aa12.76□□□□□ -0.37
Copb1-201ENSMUST00000033012 Rundc1Q0VDN7 615 aa12.76□□□□□ -0.37
Copb1-201ENSMUST00000033012 Fbxo2Q80UW2 297 aa12.76□□□□□ -0.37
Copb1-201ENSMUST00000033012 Ccnb3Q810T2 1396 aa12.76□□□□□ -0.37
Copb1-201ENSMUST00000033012 Grin2bQ01097 1482 aa12.76□□□□□ -0.37
Copb1-201ENSMUST00000033012 Q7TT23 1179 aa12.76□□□□□ -0.37
Copb1-201ENSMUST00000033012 Gcc2Q8CHG3 1679 aa12.76□□□□□ -0.37
Copb1-201ENSMUST00000033012 Carmil1Q6EDY6 1374 aa12.75□□□□□ -0.37
Copb1-201ENSMUST00000033012 Ift140E9PY46 1464 aa12.75□□□□□ -0.37
Copb1-201ENSMUST00000033012 ArxO35085 564 aa12.75□□□□□ -0.37
Copb1-201ENSMUST00000033012 Kif14L0N7N1 1674 aaKnown RBP12.75□□□□□ -0.37
Copb1-201ENSMUST00000033012 Arid4bA2CG63 1314 aaKnown RBP12.74□□□□□ -0.37
Copb1-201ENSMUST00000033012 RalgapbQ8BQZ4 1484 aa12.74□□□□□ -0.37
Copb1-201ENSMUST00000033012 Gapvd1Q6PAR5 1458 aa12.74□□□□□ -0.37
Copb1-201ENSMUST00000033012 Tbc1d32Q3URV1 1296 aa12.73□□□□□ -0.37
Copb1-201ENSMUST00000033012 Card11Q8CIS0 1159 aa12.73□□□□□ -0.37
Copb1-201ENSMUST00000033012 Map3k4O08648 1597 aa12.73□□□□□ -0.37
Copb1-201ENSMUST00000033012 DekQ7TNV0 380 aaKnown RBP12.73□□□□□ -0.37
Copb1-201ENSMUST00000033012 Plch2A2AP18 1501 aa12.72□□□□□ -0.37
Copb1-201ENSMUST00000033012 Catsper2A2ARP9 588 aa12.72□□□□□ -0.37
Copb1-201ENSMUST00000033012 Ush1cQ9ES64 910 aa12.72□□□□□ -0.37
Copb1-201ENSMUST00000033012 SphkapQ6NSW3 1687 aa12.72□□□□□ -0.37
Copb1-201ENSMUST00000033012 Kif27Q7M6Z4 1394 aa12.72□□□□□ -0.37
Copb1-201ENSMUST00000033012 Kiaa0753Q6A000 959 aa12.71□□□□□ -0.37
Copb1-201ENSMUST00000033012 Rock1P70335 1354 aa12.71□□□□□ -0.38
Copb1-201ENSMUST00000033012 Tex14Q7M6U3 1450 aa12.7□□□□□ -0.38
Copb1-201ENSMUST00000033012 Ddit3P35639 168 aa12.7□□□□□ -0.38
Copb1-201ENSMUST00000033012 Soga1E1U8D0 1418 aa12.7□□□□□ -0.38
Copb1-201ENSMUST00000033012 Aebp1Q640N1 1128 aa12.69□□□□□ -0.38
Copb1-201ENSMUST00000033012 Tmem132aQ922P8 1018 aa12.69□□□□□ -0.38
Copb1-201ENSMUST00000033012 Terf2O35144 541 aa12.68□□□□□ -0.38
Copb1-201ENSMUST00000033012 Setd1aE9PYH6 1716 aa12.68□□□□□ -0.38
Copb1-201ENSMUST00000033012 Kif21aQ9QXL2 1672 aa12.68□□□□□ -0.38
Copb1-201ENSMUST00000033012 Plcb2A3KGF7 1181 aa12.68□□□□□ -0.38
Copb1-201ENSMUST00000033012 Sox12Q04890 314 aa12.68□□□□□ -0.38
Copb1-201ENSMUST00000033012 Cdk13Q69ZA1 1511 aaKnown RBP12.68□□□□□ -0.38
Copb1-201ENSMUST00000033012 Ppp2r3aB2RXC8 1150 aa12.67□□□□□ -0.38
Copb1-201ENSMUST00000033012 Ccdc94Q9D6J3 314 aa12.67□□□□□ -0.38
Copb1-201ENSMUST00000033012 ScaperF8VQ70 1398 aaKnown RBP12.67□□□□□ -0.38
Copb1-201ENSMUST00000033012 Zfp644E9QA22 1323 aa12.66□□□□□ -0.38
Copb1-201ENSMUST00000033012 Znf521Q6KAS7 1311 aa12.66□□□□□ -0.38
Copb1-201ENSMUST00000033012 Stac3Q8BZ71 360 aa12.66□□□□□ -0.38
Copb1-201ENSMUST00000033012 Fez1Q8K0X8 392 aa12.66□□□□□ -0.38
Copb1-201ENSMUST00000033012 Kdm5cP41230 1554 aa12.66□□□□□ -0.38
Copb1-201ENSMUST00000033012 Becn1O88597 448 aa12.66□□□□□ -0.38
Copb1-201ENSMUST00000033012 KarsQ99MN1 595 aaKnown RBP12.66□□□□□ -0.38
Copb1-201ENSMUST00000033012 Ylpm1Q9R0I7 1386 aaKnown RBP12.65□□□□□ -0.38
Copb1-201ENSMUST00000033012 Tspyl2Q7TQI8 677 aa12.65□□□□□ -0.38
Copb1-201ENSMUST00000033012 Cpsf1Q9EPU4 1441 aaKnown RBP12.64□□□□□ -0.39
Copb1-201ENSMUST00000033012 Esx1O88933 382 aa12.64□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 24 ms