RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 ZRSR1Q15695 479 aaKnown RBP10.5□□□□□ -0.73
PHGDH-228ENST00000641847 SMAD2Q15796 467 aaKnown RBP10.5□□□□□ -0.73
PHGDH-228ENST00000641847 EPC2Q52LR7 807 aa10.5□□□□□ -0.73
PHGDH-228ENST00000641847 CELF3Q5SZQ8 465 aaKnown RBP10.5□□□□□ -0.73
PHGDH-228ENST00000641847 TMEM63BQ5T3F8 832 aa10.5□□□□□ -0.73
PHGDH-228ENST00000641847 HAUS3Q68CZ6 603 aa10.5□□□□□ -0.73
PHGDH-228ENST00000641847 ZNF746Q6NUN9 644 aaPredicted RBP10.5□□□□□ -0.73
PHGDH-228ENST00000641847 CCDC62Q6P9F0 684 aa10.5□□□□□ -0.73
PHGDH-228ENST00000641847 METTL7BQ6UX53 244 aa10.5□□□□□ -0.73
PHGDH-228ENST00000641847 CYFIP1Q7L576 1253 aa10.5□□□□□ -0.73
PHGDH-228ENST00000641847 MIER3Q7Z3K6 550 aa10.5□□□□□ -0.73
PHGDH-228ENST00000641847 SMAP1Q8IYB5 467 aaPredicted RBP10.5□□□□□ -0.73
PHGDH-228ENST00000641847 FBXL6Q8N531 539 aa10.5□□□□□ -0.73
PHGDH-228ENST00000641847 COPS5Q92905 334 aa10.5□□□□□ -0.73
PHGDH-228ENST00000641847 YME1L1Q96TA2 773 aa10.5□□□□□ -0.73
PHGDH-228ENST00000641847 MMTAG2Q9BU76 263 aaKnown RBP10.5□□□□□ -0.73
PHGDH-228ENST00000641847 CCSER1Q9C0I3 900 aa10.5□□□□□ -0.73
PHGDH-228ENST00000641847 BCAS3Q9H6U6 928 aa10.5□□□□□ -0.73
PHGDH-228ENST00000641847 TELO2Q9Y4R8 837 aa10.5□□□□□ -0.73
PHGDH-228ENST00000641847 STK24Q9Y6E0 443 aa10.5□□□□□ -0.73
PHGDH-228ENST00000641847 DMDP11532 3685 aa10.5□□□□□ -0.73
PHGDH-228ENST00000641847 EMSYQ7Z589 1322 aa10.5□□□□□ -0.73
PHGDH-228ENST00000641847 KDM3AQ9Y4C1 1321 aa10.5□□□□□ -0.73
PHGDH-228ENST00000641847 MED24O75448 989 aa10.49□□□□□ -0.73
PHGDH-228ENST00000641847 GH1P01241 217 aa10.49□□□□□ -0.73
PHGDH-228ENST00000641847 SFNP31947 248 aa10.49□□□□□ -0.73
PHGDH-228ENST00000641847 CCT6AP40227 531 aaKnown RBP10.49□□□□□ -0.73
PHGDH-228ENST00000641847 SYKP43405 635 aa10.49□□□□□ -0.73
PHGDH-228ENST00000641847 ACTR2P61160 394 aa10.49□□□□□ -0.73
PHGDH-228ENST00000641847 CYP4A11Q02928 519 aa10.49□□□□□ -0.73
PHGDH-228ENST00000641847 EPHA7Q15375 998 aa10.49□□□□□ -0.73
PHGDH-228ENST00000641847 MIS18BP1Q6P0N0 1132 aa10.49□□□□□ -0.73
PHGDH-228ENST00000641847 DHX37Q8IY37 1157 aaKnown RBP10.49□□□□□ -0.73
PHGDH-228ENST00000641847 MYOCDQ8IZQ8 938 aa10.49□□□□□ -0.73
PHGDH-228ENST00000641847 FMR1NBQ8N0W7 255 aaPredicted RBP10.49□□□□□ -0.73
PHGDH-228ENST00000641847 RDM1Q8NG50 284 aa10.49□□□□□ -0.73
PHGDH-228ENST00000641847 PPP2R3CQ969Q6 453 aa10.49□□□□□ -0.73
PHGDH-228ENST00000641847 CALML4Q96GE6 196 aa10.49□□□□□ -0.73
PHGDH-228ENST00000641847 CDK5RAP3Q96JB5 506 aa10.49□□□□□ -0.73
PHGDH-228ENST00000641847 EIF2AK1Q9BQI3 630 aaKnown RBP10.49□□□□□ -0.73
PHGDH-228ENST00000641847 MLXIPQ9HAP2 919 aa10.49□□□□□ -0.73
PHGDH-228ENST00000641847 DISC1Q9NRI5 854 aa10.49□□□□□ -0.73
PHGDH-228ENST00000641847 CCDC39Q9UFE4 941 aa10.49□□□□□ -0.73
PHGDH-228ENST00000641847 KCNH3Q9ULD8 1083 aa10.49□□□□□ -0.73
PHGDH-228ENST00000641847 SAMM50Q9Y512 469 aa10.49□□□□□ -0.73
PHGDH-228ENST00000641847 COL4A4P53420 1690 aaPredicted RBP10.49□□□□□ -0.73
PHGDH-228ENST00000641847 DCHS1Q96JQ0 3298 aa10.49□□□□□ -0.73
PHGDH-228ENST00000641847 RIF1Q5UIP0 2472 aaKnown RBP10.48□□□□□ -0.73
PHGDH-228ENST00000641847 A0A087X0B3 334 aa10.48□□□□□ -0.73
PHGDH-228ENST00000641847 NOP56O00567 594 aaKnown RBP10.48□□□□□ -0.73
PHGDH-228ENST00000641847 POLR2DO15514 142 aaKnown RBP10.48□□□□□ -0.73
PHGDH-228ENST00000641847 SLC26A4O43511 780 aa10.48□□□□□ -0.73
PHGDH-228ENST00000641847 KINO60870 393 aaKnown RBP10.48□□□□□ -0.73
PHGDH-228ENST00000641847 NR1I2O75469 434 aa10.48□□□□□ -0.73
PHGDH-228ENST00000641847 CKBP12277 381 aa10.48□□□□□ -0.73
PHGDH-228ENST00000641847 PLCG1P19174 1290 aa10.48□□□□□ -0.73
PHGDH-228ENST00000641847 STAT6P42226 847 aa10.48□□□□□ -0.73
PHGDH-228ENST00000641847 NUBP1P53384 320 aa10.48□□□□□ -0.73
PHGDH-228ENST00000641847 ARHGAP1Q07960 439 aa10.48□□□□□ -0.73
PHGDH-228ENST00000641847 TCF15Q12870 199 aa10.48□□□□□ -0.73
PHGDH-228ENST00000641847 SMAD4Q13485 552 aaKnown RBP10.48□□□□□ -0.73
PHGDH-228ENST00000641847 LAMC2Q13753 1193 aa10.48□□□□□ -0.73
PHGDH-228ENST00000641847 COL19A1Q14993 1142 aa10.48□□□□□ -0.73
PHGDH-228ENST00000641847 CLUL1Q15846 466 aa10.48□□□□□ -0.73
PHGDH-228ENST00000641847 ECM1Q16610 540 aa10.48□□□□□ -0.73
PHGDH-228ENST00000641847 KLHL40Q2TBA0 621 aa10.48□□□□□ -0.73
PHGDH-228ENST00000641847 TMEM119Q4V9L6 283 aa10.48□□□□□ -0.73
PHGDH-228ENST00000641847 POTEGQ6S5H5 508 aa10.48□□□□□ -0.73
PHGDH-228ENST00000641847 RPAINQ86UA6 219 aa10.48□□□□□ -0.73
PHGDH-228ENST00000641847 SESTD1Q86VW0 696 aa10.48□□□□□ -0.73
PHGDH-228ENST00000641847 PDILTQ8N807 584 aa10.48□□□□□ -0.73
PHGDH-228ENST00000641847 C7orf31Q8N865 590 aa10.48□□□□□ -0.73
PHGDH-228ENST00000641847 ENGASEQ8NFI3 743 aa10.48□□□□□ -0.73
PHGDH-228ENST00000641847 EMID1Q96A84 441 aaPredicted RBP10.48□□□□□ -0.73
PHGDH-228ENST00000641847 DHX58Q96C10 678 aa10.48□□□□□ -0.73
PHGDH-228ENST00000641847 DYDC2Q96IM9 177 aa10.48□□□□□ -0.73
PHGDH-228ENST00000641847 SPATA33Q96N06 139 aa10.48□□□□□ -0.73
PHGDH-228ENST00000641847 PNMA5Q96PV4 448 aa10.48□□□□□ -0.73
PHGDH-228ENST00000641847 PLIN2Q99541 437 aa10.48□□□□□ -0.73
PHGDH-228ENST00000641847 PYM1Q9BRP8 204 aaKnown RBP10.48□□□□□ -0.73
PHGDH-228ENST00000641847 LXNQ9BS40 222 aa10.48□□□□□ -0.73
PHGDH-228ENST00000641847 POLR3CQ9BUI4 534 aaPredicted RBP10.48□□□□□ -0.73
PHGDH-228ENST00000641847 DACT1Q9NYF0 836 aa10.48□□□□□ -0.73
PHGDH-228ENST00000641847 RGL1Q9NZL6 768 aa10.48□□□□□ -0.73
PHGDH-228ENST00000641847 SCN5AQ14524 2016 aa10.47□□□□□ -0.73
PHGDH-228ENST00000641847 MBTPS2O43462 519 aa10.47□□□□□ -0.73
PHGDH-228ENST00000641847 ACTN4O43707 911 aaKnown RBP10.47□□□□□ -0.73
PHGDH-228ENST00000641847 TRAK2O60296 914 aa10.47□□□□□ -0.73
PHGDH-228ENST00000641847 NBNO60934 754 aa10.47□□□□□ -0.73
PHGDH-228ENST00000641847 LGR5O75473 907 aa10.47□□□□□ -0.73
PHGDH-228ENST00000641847 PSAPP07602 524 aa10.47□□□□□ -0.73
PHGDH-228ENST00000641847 SPATA31C1P0DKV0 1188 aa10.47□□□□□ -0.73
PHGDH-228ENST00000641847 RPA1P27694 616 aa10.47□□□□□ -0.73
PHGDH-228ENST00000641847 HTRA4P83105 476 aaPredicted RBP10.47□□□□□ -0.73
PHGDH-228ENST00000641847 RBL2Q08999 1139 aa10.47□□□□□ -0.73
PHGDH-228ENST00000641847 SNW1Q13573 536 aaKnown RBP10.47□□□□□ -0.73
PHGDH-228ENST00000641847 CTTNQ14247 550 aaKnown RBP10.47□□□□□ -0.73
PHGDH-228ENST00000641847 E2F4Q16254 413 aa10.47□□□□□ -0.73
PHGDH-228ENST00000641847 SKOR2Q2VWA4 1001 aaPredicted RBP10.47□□□□□ -0.73
PHGDH-228ENST00000641847 HYIQ5T013 277 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms