RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 SRRTQ9BXP5 876 aaKnown RBP14.47□□□□□ -0.09
PHGDH-221ENST00000641573 KATNBL1Q9H079 304 aa14.47□□□□□ -0.09
PHGDH-221ENST00000641573 THAP9Q9H5L6 903 aa14.47□□□□□ -0.09
PHGDH-221ENST00000641573 MRPL44Q9H9J2 332 aaKnown RBP14.47□□□□□ -0.09
PHGDH-221ENST00000641573 OLFML3Q9NRN5 406 aa14.47□□□□□ -0.09
PHGDH-221ENST00000641573 SEL1LQ9UBV2 794 aa14.47□□□□□ -0.09
PHGDH-221ENST00000641573 SEPT9Q9UHD8 586 aaPredicted RBP14.47□□□□□ -0.09
PHGDH-221ENST00000641573 LOXHD1Q8IVV2 1947 aa14.47□□□□□ -0.09
PHGDH-221ENST00000641573 PLXNA1Q9UIW2 1896 aa14.46□□□□□ -0.09
PHGDH-221ENST00000641573 GOLGA6L6A8MZA4 724 aa14.46□□□□□ -0.09
PHGDH-221ENST00000641573 KCNJ18B7U540 433 aa14.46□□□□□ -0.09
PHGDH-221ENST00000641573 NOP56O00567 594 aaKnown RBP14.46□□□□□ -0.09
PHGDH-221ENST00000641573 OATP04181 439 aa14.46□□□□□ -0.09
PHGDH-221ENST00000641573 MYBP10242 640 aa14.46□□□□□ -0.09
PHGDH-221ENST00000641573 XRCC5P13010 732 aaKnown RBP14.46□□□□□ -0.09
PHGDH-221ENST00000641573 FOSL2P15408 326 aa14.46□□□□□ -0.09
PHGDH-221ENST00000641573 ATP4AP20648 1035 aa14.46□□□□□ -0.09
PHGDH-221ENST00000641573 TCF7P36402 384 aaPredicted RBP14.46□□□□□ -0.09
PHGDH-221ENST00000641573 CASP5P51878 434 aa14.46□□□□□ -0.09
PHGDH-221ENST00000641573 LRRC63Q05C16 580 aa14.46□□□□□ -0.09
PHGDH-221ENST00000641573 KCNJ12Q14500 433 aa14.46□□□□□ -0.09
PHGDH-221ENST00000641573 TMEM63BQ5T3F8 832 aa14.46□□□□□ -0.09
PHGDH-221ENST00000641573 FOXR2Q6PJQ5 311 aa14.46□□□□□ -0.09
PHGDH-221ENST00000641573 MAEAQ7L5Y9 396 aa14.46□□□□□ -0.09
PHGDH-221ENST00000641573 IRF2BP1Q8IU81 584 aa14.46□□□□□ -0.09
PHGDH-221ENST00000641573 NELFCDQ8IXH7 590 aa14.46□□□□□ -0.09
PHGDH-221ENST00000641573 DAW1Q8N136 415 aa14.46□□□□□ -0.09
PHGDH-221ENST00000641573 MSL3Q8N5Y2 521 aaKnown RBP14.46□□□□□ -0.09
PHGDH-221ENST00000641573 ANKRD20A12PQ8NF67 263 aa14.46□□□□□ -0.09
PHGDH-221ENST00000641573 AFAP1L1Q8TED9 768 aa14.46□□□□□ -0.09
PHGDH-221ENST00000641573 USP6NLQ92738 828 aa14.46□□□□□ -0.09
PHGDH-221ENST00000641573 SPATA33Q96N06 139 aa14.46□□□□□ -0.09
PHGDH-221ENST00000641573 GPR20Q99678 358 aa14.46□□□□□ -0.09
PHGDH-221ENST00000641573 LIMA1Q9UHB6 759 aaKnown RBP14.46□□□□□ -0.09
PHGDH-221ENST00000641573 PRPF6O94906 941 aaKnown RBP14.45□□□□□ -0.1
PHGDH-221ENST00000641573 GCNT3O95395 438 aa14.45□□□□□ -0.1
PHGDH-221ENST00000641573 GH1P01241 217 aa14.45□□□□□ -0.1
PHGDH-221ENST00000641573 TPM3P06753 285 aa14.45□□□□□ -0.1
PHGDH-221ENST00000641573 NMT1P30419 496 aaKnown RBP14.45□□□□□ -0.1
PHGDH-221ENST00000641573 STAT5BP51692 787 aa14.45□□□□□ -0.1
PHGDH-221ENST00000641573 ARHGAP1Q07960 439 aa14.45□□□□□ -0.1
PHGDH-221ENST00000641573 CACNB2Q08289 660 aaPredicted RBP14.45□□□□□ -0.1
PHGDH-221ENST00000641573 KRT31Q15323 416 aa14.45□□□□□ -0.1
PHGDH-221ENST00000641573 BMT2Q1RMZ1 405 aa14.45□□□□□ -0.1
PHGDH-221ENST00000641573 ZCWPW2Q504Y3 356 aa14.45□□□□□ -0.1
PHGDH-221ENST00000641573 HS1BP3Q53T59 392 aa14.45□□□□□ -0.1
PHGDH-221ENST00000641573 TCP11X2Q5H9J9 407 aa14.45□□□□□ -0.1
PHGDH-221ENST00000641573 ODR4Q5SWX8 454 aa14.45□□□□□ -0.1
PHGDH-221ENST00000641573 APTXQ7Z2E3 356 aaKnown RBP14.45□□□□□ -0.1
PHGDH-221ENST00000641573 FAM178BQ8IXR5 827 aa14.45□□□□□ -0.1
PHGDH-221ENST00000641573 ZNF507Q8TCN5 953 aa14.45□□□□□ -0.1
PHGDH-221ENST00000641573 MYLIPQ8WY64 445 aa14.45□□□□□ -0.1
PHGDH-221ENST00000641573 DRC1Q96MC2 740 aa14.45□□□□□ -0.1
PHGDH-221ENST00000641573 CTAGE1Q96RT6 745 aa14.45□□□□□ -0.1
PHGDH-221ENST00000641573 SENP6Q9GZR1 1112 aaPredicted RBP14.45□□□□□ -0.1
PHGDH-221ENST00000641573 AZI2Q9H6S1 392 aa14.45□□□□□ -0.1
PHGDH-221ENST00000641573 CYP26B1Q9NR63 512 aa14.45□□□□□ -0.1
PHGDH-221ENST00000641573 NRBP2Q9NSY0 501 aa14.45□□□□□ -0.1
PHGDH-221ENST00000641573 MAGEC2Q9UBF1 373 aaPredicted RBP14.45□□□□□ -0.1
PHGDH-221ENST00000641573 PRUNE2Q8WUY3 3088 aa14.44□□□□□ -0.1
PHGDH-221ENST00000641573 A0A1B0GTH6 734 aa14.44□□□□□ -0.1
PHGDH-221ENST00000641573 EIF3DO15371 548 aaKnown RBP eCLIP14.44□□□□□ -0.1
PHGDH-221ENST00000641573 LGR5O75473 907 aa14.44□□□□□ -0.1
PHGDH-221ENST00000641573 DGAT1O75907 488 aa14.44□□□□□ -0.1
PHGDH-221ENST00000641573 FGFR1OPO95684 399 aaKnown RBP14.44□□□□□ -0.1
PHGDH-221ENST00000641573 IGHA2P01877 340 aa14.44□□□□□ -0.1
PHGDH-221ENST00000641573 HOXC6P09630 235 aa14.44□□□□□ -0.1
PHGDH-221ENST00000641573 PLS3P13797 630 aa14.44□□□□□ -0.1
PHGDH-221ENST00000641573 EEF1GP26641 437 aaKnown RBP14.44□□□□□ -0.1
PHGDH-221ENST00000641573 RGS2P41220 211 aa14.44□□□□□ -0.1
PHGDH-221ENST00000641573 ADCYAP1R1P41586 468 aa14.44□□□□□ -0.1
PHGDH-221ENST00000641573 COPB1P53618 953 aaKnown RBP14.44□□□□□ -0.1
PHGDH-221ENST00000641573 ACVR2BQ13705 512 aa14.44□□□□□ -0.1
PHGDH-221ENST00000641573 LAMC2Q13753 1193 aa14.44□□□□□ -0.1
PHGDH-221ENST00000641573 NR1I3Q14994 352 aa14.44□□□□□ -0.1
PHGDH-221ENST00000641573 KNOP1Q1ED39 458 aaKnown RBP14.44□□□□□ -0.1
PHGDH-221ENST00000641573 HSDL1Q3SXM5 330 aa14.44□□□□□ -0.1
PHGDH-221ENST00000641573 MTERF2Q49AM1 385 aa14.44□□□□□ -0.1
PHGDH-221ENST00000641573 FILIP1LQ4L180 1135 aa14.44□□□□□ -0.1
PHGDH-221ENST00000641573 FAM102BQ5T8I3 360 aa14.44□□□□□ -0.1
PHGDH-221ENST00000641573 STXBP4Q6ZWJ1 553 aa14.44□□□□□ -0.1
PHGDH-221ENST00000641573 CREBRFQ8IUR6 639 aa14.44□□□□□ -0.1
PHGDH-221ENST00000641573 FAM114A1Q8IWE2 563 aa14.44□□□□□ -0.1
PHGDH-221ENST00000641573 FIZ1Q96SL8 496 aa14.44□□□□□ -0.1
PHGDH-221ENST00000641573 NIFKQ9BYG3 293 aaKnown RBP14.44□□□□□ -0.1
PHGDH-221ENST00000641573 KCTD10Q9H3F6 313 aa14.44□□□□□ -0.1
PHGDH-221ENST00000641573 ABHD16BQ9H3Z7 469 aa14.44□□□□□ -0.1
PHGDH-221ENST00000641573 INTS13Q9NVM9 706 aa14.44□□□□□ -0.1
PHGDH-221ENST00000641573 LARSQ9P2J5 1176 aaKnown RBP14.44□□□□□ -0.1
PHGDH-221ENST00000641573 ZHX1Q9UKY1 873 aaPredicted RBP14.44□□□□□ -0.1
PHGDH-221ENST00000641573 UBE4BO95155 1302 aa14.43□□□□□ -0.1
PHGDH-221ENST00000641573 LRRC10BA6NIK2 292 aa14.43□□□□□ -0.1
PHGDH-221ENST00000641573 TNFRSF10AO00220 468 aa14.43□□□□□ -0.1
PHGDH-221ENST00000641573 MAPTP10636 758 aaKnown RBP14.43□□□□□ -0.1
PHGDH-221ENST00000641573 PTGS1P23219 599 aa14.43□□□□□ -0.1
PHGDH-221ENST00000641573 CCND3P30281 292 aaPredicted RBP14.43□□□□□ -0.1
PHGDH-221ENST00000641573 HOXD13P35453 343 aa14.43□□□□□ -0.1
PHGDH-221ENST00000641573 GJC2Q5T442 439 aaPredicted RBP14.43□□□□□ -0.1
PHGDH-221ENST00000641573 LHX8Q68G74 356 aa14.43□□□□□ -0.1
PHGDH-221ENST00000641573 PLPPR4Q7Z2D5 763 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms