RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 TIGD1Q96MW7 591 aa23.92■■□□□ 1.42
TSPAN9-208ENST00000640568 CTAGE1Q96RT6 745 aa23.92■■□□□ 1.42
TSPAN9-208ENST00000640568 POLR3FQ9H1D9 316 aaPredicted RBP23.92■■□□□ 1.42
TSPAN9-208ENST00000640568 PRDM5Q9NQX1 630 aaPredicted RBP23.92■■□□□ 1.42
TSPAN9-208ENST00000640568 TMEM39AQ9NV64 488 aa23.92■■□□□ 1.42
TSPAN9-208ENST00000640568 HOOK1Q9UJC3 728 aaKnown RBP23.92■■□□□ 1.42
TSPAN9-208ENST00000640568 NPHP3-ACAD11A0A0J9YXS1 232 aa23.91■■□□□ 1.42
TSPAN9-208ENST00000640568 MYMKA6NI61 221 aa23.91■■□□□ 1.42
TSPAN9-208ENST00000640568 HIP1RO75146 1068 aa23.91■■□□□ 1.42
TSPAN9-208ENST00000640568 TBCAO75347 108 aaKnown RBP23.91■■□□□ 1.42
TSPAN9-208ENST00000640568 MBD3O95983 291 aa23.91■■□□□ 1.42
TSPAN9-208ENST00000640568 VTNP04004 478 aa23.91■■□□□ 1.42
TSPAN9-208ENST00000640568 CACNB1Q02641 598 aaPredicted RBP23.91■■□□□ 1.42
TSPAN9-208ENST00000640568 DRP2Q13474 957 aa23.91■■□□□ 1.42
TSPAN9-208ENST00000640568 ARSHQ5FYA8 562 aa23.91■■□□□ 1.42
TSPAN9-208ENST00000640568 RHPN2Q8IUC4 686 aa23.91■■□□□ 1.42
TSPAN9-208ENST00000640568 KIAA0319LQ8IZA0 1049 aa23.91■■□□□ 1.42
TSPAN9-208ENST00000640568 SCLT1Q96NL6 688 aa23.91■■□□□ 1.42
TSPAN9-208ENST00000640568 REEP2Q9BRK0 252 aa23.91■■□□□ 1.42
TSPAN9-208ENST00000640568 GPRC5CQ9NQ84 441 aa23.91■■□□□ 1.42
TSPAN9-208ENST00000640568 PRKAG2Q9UGJ0 569 aa23.91■■□□□ 1.42
TSPAN9-208ENST00000640568 ODF2LQ9ULJ1 636 aa23.91■■□□□ 1.42
TSPAN9-208ENST00000640568 FAM13AO94988 1023 aa23.9■■□□□ 1.42
TSPAN9-208ENST00000640568 MXD4Q14582 209 aaPredicted RBP23.9■■□□□ 1.42
TSPAN9-208ENST00000640568 GRAMD1CQ8IYS0 662 aa23.9■■□□□ 1.42
TSPAN9-208ENST00000640568 DHX38Q92620 1227 aaKnown RBP23.9■■□□□ 1.42
TSPAN9-208ENST00000640568 IFT74Q96LB3 600 aa23.9■■□□□ 1.42
TSPAN9-208ENST00000640568 ZHX3Q9H4I2 956 aa23.9■■□□□ 1.42
TSPAN9-208ENST00000640568 COL4A3BPQ9Y5P4 624 aa23.9■■□□□ 1.42
TSPAN9-208ENST00000640568 CAND2O75155 1236 aa23.89■■□□□ 1.42
TSPAN9-208ENST00000640568 ASIC1P78348 528 aa23.89■■□□□ 1.42
TSPAN9-208ENST00000640568 CDC42EP1Q00587 391 aa23.89■■□□□ 1.42
TSPAN9-208ENST00000640568 TMEM62Q0P6H9 643 aa23.89■■□□□ 1.42
TSPAN9-208ENST00000640568 MKRN4PQ13434 485 aaPredicted RBP23.89■■□□□ 1.42
TSPAN9-208ENST00000640568 GIT2Q14161 759 aa23.89■■□□□ 1.42
TSPAN9-208ENST00000640568 C7orf61Q8IZ16 206 aa23.89■■□□□ 1.42
TSPAN9-208ENST00000640568 DPF3Q92784 378 aa23.89■■□□□ 1.42
TSPAN9-208ENST00000640568 WNT8BQ93098 351 aa23.89■■□□□ 1.42
TSPAN9-208ENST00000640568 PPP1R16BQ96T49 567 aa23.89■■□□□ 1.42
TSPAN9-208ENST00000640568 TRIM9Q9C026 710 aa23.89■■□□□ 1.42
TSPAN9-208ENST00000640568 HIPK3Q9H422 1215 aa23.89■■□□□ 1.42
TSPAN9-208ENST00000640568 POLD4Q9HCU8 107 aa23.89■■□□□ 1.42
TSPAN9-208ENST00000640568 TANC1Q9C0D5 1861 aa23.89■■□□□ 1.41
TSPAN9-208ENST00000640568 ASAP2O43150 1006 aa23.88■■□□□ 1.41
TSPAN9-208ENST00000640568 EVI5O60447 810 aa23.88■■□□□ 1.41
TSPAN9-208ENST00000640568 MYL1P05976 194 aa23.88■■□□□ 1.41
TSPAN9-208ENST00000640568 CTSHP09668 335 aa23.88■■□□□ 1.41
TSPAN9-208ENST00000640568 IDEP14735 1019 aa23.88■■□□□ 1.41
TSPAN9-208ENST00000640568 ARL2P36404 184 aa23.88■■□□□ 1.41
TSPAN9-208ENST00000640568 TFDP1Q14186 410 aa23.88■■□□□ 1.41
TSPAN9-208ENST00000640568 PPP2R5AQ15172 486 aa23.88■■□□□ 1.41
TSPAN9-208ENST00000640568 RPAINQ86UA6 219 aa23.88■■□□□ 1.41
TSPAN9-208ENST00000640568 ZNF710Q8N1W2 664 aa23.88■■□□□ 1.41
TSPAN9-208ENST00000640568 PRPF31Q8WWY3 499 aaKnown RBP23.88■■□□□ 1.41
TSPAN9-208ENST00000640568 NLRP4Q96MN2 994 aa23.88■■□□□ 1.41
TSPAN9-208ENST00000640568 C7orf25Q9BPX7 421 aa23.88■■□□□ 1.41
TSPAN9-208ENST00000640568 BLZF1Q9H2G9 400 aa23.88■■□□□ 1.41
TSPAN9-208ENST00000640568 GINS2Q9Y248 185 aa23.88■■□□□ 1.41
TSPAN9-208ENST00000640568 GTPBP6O43824 516 aaPredicted RBP23.87■■□□□ 1.41
TSPAN9-208ENST00000640568 CKBP12277 381 aa23.87■■□□□ 1.41
TSPAN9-208ENST00000640568 MRPS6P82932 125 aaKnown RBP23.87■■□□□ 1.41
TSPAN9-208ENST00000640568 CCDC65Q8IXS2 484 aa23.87■■□□□ 1.41
TSPAN9-208ENST00000640568 NLRP7Q8WX94 980 aa23.87■■□□□ 1.41
TSPAN9-208ENST00000640568 PPP1R12CQ9BZL4 782 aa23.87■■□□□ 1.41
TSPAN9-208ENST00000640568 PARVGQ9HBI0 331 aa23.87■■□□□ 1.41
TSPAN9-208ENST00000640568 LARSQ9P2J5 1176 aaKnown RBP23.87■■□□□ 1.41
TSPAN9-208ENST00000640568 TRPV2Q9Y5S1 764 aa23.87■■□□□ 1.41
TSPAN9-208ENST00000640568 RSPH10B2B2RC85 870 aa23.87■■□□□ 1.41
TSPAN9-208ENST00000640568 PITPNM1O00562 1244 aa23.87■■□□□ 1.41
TSPAN9-208ENST00000640568 CAPN15O75808 1086 aa23.87■■□□□ 1.41
TSPAN9-208ENST00000640568 RSPH10BP0C881 870 aa23.87■■□□□ 1.41
TSPAN9-208ENST00000640568 NLRP11P59045 1033 aaKnown RBP23.87■■□□□ 1.41
TSPAN9-208ENST00000640568 LAMTOR4Q0VGL1 99 aa23.87■■□□□ 1.41
TSPAN9-208ENST00000640568 DMP1Q13316 513 aaPredicted RBP23.87■■□□□ 1.41
TSPAN9-208ENST00000640568 CUL4BQ13620 913 aa23.87■■□□□ 1.41
TSPAN9-208ENST00000640568 POSTNQ15063 836 aa23.87■■□□□ 1.41
TSPAN9-208ENST00000640568 TRIM71Q2Q1W2 868 aaKnown RBP23.87■■□□□ 1.41
TSPAN9-208ENST00000640568 SH3RF1Q7Z6J0 888 aa23.87■■□□□ 1.41
TSPAN9-208ENST00000640568 GPT2Q8TD30 523 aa23.87■■□□□ 1.41
TSPAN9-208ENST00000640568 ASAP3Q8TDY4 903 aa23.87■■□□□ 1.41
TSPAN9-208ENST00000640568 C17orf75Q9HAS0 396 aa23.87■■□□□ 1.41
TSPAN9-208ENST00000640568 TBX21Q9UL17 535 aa23.87■■□□□ 1.41
TSPAN9-208ENST00000640568 CDY2AQ9Y6F7 541 aa23.87■■□□□ 1.41
TSPAN9-208ENST00000640568 SIP14410 1827 aa23.86■■□□□ 1.41
TSPAN9-208ENST00000640568 SFI1A8K8P3 1242 aa23.86■■□□□ 1.41
TSPAN9-208ENST00000640568 SRGAP2CP0DJJ0 459 aa23.86■■□□□ 1.41
TSPAN9-208ENST00000640568 GLRA2P23416 452 aa23.86■■□□□ 1.41
TSPAN9-208ENST00000640568 CASP1P29466 404 aa23.86■■□□□ 1.41
TSPAN9-208ENST00000640568 GPC3P51654 580 aa23.86■■□□□ 1.41
TSPAN9-208ENST00000640568 RBL2Q08999 1139 aa23.86■■□□□ 1.41
TSPAN9-208ENST00000640568 KIZQ2M2Z5 673 aa23.86■■□□□ 1.41
TSPAN9-208ENST00000640568 ZNF618Q5T7W0 954 aa23.86■■□□□ 1.41
TSPAN9-208ENST00000640568 KSR1Q8IVT5 923 aa23.86■■□□□ 1.41
TSPAN9-208ENST00000640568 MYCT1Q8N699 235 aa23.86■■□□□ 1.41
TSPAN9-208ENST00000640568 CCDC47Q96A33 483 aaKnown RBP23.86■■□□□ 1.41
TSPAN9-208ENST00000640568 DNAJC19Q96DA6 116 aa23.86■■□□□ 1.41
TSPAN9-208ENST00000640568 ZNF668Q96K58 619 aaPredicted RBP23.86■■□□□ 1.41
TSPAN9-208ENST00000640568 NOC4LQ9BVI4 516 aaKnown RBP23.86■■□□□ 1.41
TSPAN9-208ENST00000640568 PANK4Q9NVE7 773 aa23.86■■□□□ 1.41
TSPAN9-208ENST00000640568 KCNG1Q9UIX4 513 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms