RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 ATP9AO75110 1047 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 RFC1P35251 1148 aaPredicted RBP4.61□□□□□ -1.67
SCN3A-209ENST00000639244 GNAQP50148 359 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 EPHB1P54762 984 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 SNX30Q5VWJ9 437 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 KIF6Q6ZMV9 814 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 C7orf57Q8NEG2 295 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 ENKURQ8TC29 256 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 LENG1Q96BZ8 264 aaPredicted RBP4.61□□□□□ -1.67
SCN3A-209ENST00000639244 IFT74Q96LB3 600 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 SERINC2Q96SA4 455 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 SDF4Q9BRK5 362 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 KATNAL1Q9BW62 490 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 DDX28Q9NUL7 540 aaKnown RBP4.61□□□□□ -1.67
SCN3A-209ENST00000639244 GSTT2P0CG29 244 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 GSTT2BP0CG30 244 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 STAT6P42226 847 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 AP3M2P53677 418 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 C21orf58P58505 322 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 SETMARQ53H47 684 aaPredicted RBP4.61□□□□□ -1.67
SCN3A-209ENST00000639244 SYTL1Q8IYJ3 562 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 FBXO30Q8TB52 745 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 LRRC59Q96AG4 307 aaKnown RBP4.61□□□□□ -1.67
SCN3A-209ENST00000639244 CCDC106Q9BWC9 280 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 ANLNQ9NQW6 1124 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 DDX20Q9UHI6 824 aaKnown RBP4.61□□□□□ -1.67
SCN3A-209ENST00000639244 PSMA2P25787 234 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 KRT76Q01546 638 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 CYP4A11Q02928 519 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 SGO2Q562F6 1265 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 CYP4A22Q5TCH4 519 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 AGMOQ6ZNB7 445 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 SPATA2LQ8IUW3 424 aaPredicted RBP4.61□□□□□ -1.67
SCN3A-209ENST00000639244 DIS3L2Q8IYB7 885 aaKnown RBP4.61□□□□□ -1.67
SCN3A-209ENST00000639244 CABLES1Q8TDN4 633 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 TIMMDC1Q9NPL8 285 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 KPNA5O15131 536 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 PIP5K1CO60331 668 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 KLHL18O94889 574 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 IFNAR2P48551 515 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 APBA1Q02410 837 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 CNGA2Q16280 664 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 TMEM259Q4ZIN3 620 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 RASIP1Q5U651 963 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 INPP5DQ92835 1189 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 TUBGCP5Q96RT8 1024 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 DDX50Q9BQ39 737 aaKnown RBP4.61□□□□□ -1.67
SCN3A-209ENST00000639244 DESI2Q9BSY9 194 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 COMMD3-BMI1R4GMX3 469 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 NR1I2O75469 434 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 SERPINI2O75830 405 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 CFL1P23528 166 aaKnown RBP4.61□□□□□ -1.67
SCN3A-209ENST00000639244 PPP2R5DQ14738 602 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 ARHGAP44Q17R89 818 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 CCDC81Q6ZN84 652 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 RHOUQ7L0Q8 258 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 PNMA8AQ86V59 439 aaPredicted RBP4.61□□□□□ -1.67
SCN3A-209ENST00000639244 TSGA13Q96PP4 275 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 NEK6Q9HC98 313 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 FAM114A2Q9NRY5 505 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 MOSPD1Q9UJG1 213 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 CDV3Q9UKY7 258 aaKnown RBP4.61□□□□□ -1.67
SCN3A-209ENST00000639244 POLR3DP05423 398 aaPredicted RBP4.61□□□□□ -1.67
SCN3A-209ENST00000639244 KDSRQ06136 332 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 KRT32Q14532 448 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 SLC9A5Q14940 896 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 PDE12Q6L8Q7 609 aaKnown RBP4.61□□□□□ -1.67
SCN3A-209ENST00000639244 ERAP2Q6P179 960 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 PLEKHM3Q6ZWE6 761 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 SLC9B2Q86UD5 537 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 SPICE1Q8N0Z3 855 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 PROM2Q8N271 834 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 OR6C4Q8NGE1 309 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 NUDT16Q96DE0 195 aaKnown RBP4.61□□□□□ -1.67
SCN3A-209ENST00000639244 RADILQ96JH8 1075 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 HS6ST2Q96MM7 605 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 ZNF700Q9H0M5 742 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 TRIM45Q9H8W5 580 aaPredicted RBP4.61□□□□□ -1.67
SCN3A-209ENST00000639244 PDE11AQ9HCR9 933 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 PTBP2Q9UKA9 531 aaKnown RBP4.61□□□□□ -1.67
SCN3A-209ENST00000639244 TLK1Q9UKI8 766 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 CAPN11Q9UMQ6 739 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 TRIM35Q9UPQ4 493 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 ERBINQ96RT1 1412 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 ANO9A1A5B4 782 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 PSMD9O00233 223 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 FARP2O94887 1054 aaPredicted RBP4.61□□□□□ -1.67
SCN3A-209ENST00000639244 CCNDBP1O95273 360 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 TRIM28Q13263 835 aaKnown RBP4.61□□□□□ -1.67
SCN3A-209ENST00000639244 ITPRIPL1Q6GPH6 555 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 BEND4Q6ZU67 534 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 MAELQ96JY0 434 aaKnown RBP4.61□□□□□ -1.67
SCN3A-209ENST00000639244 CNDP1Q96KN2 507 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 TEKT2Q9UIF3 430 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 OTOFQ9HC10 1997 aa4.61□□□□□ -1.67
SCN3A-209ENST00000639244 TRIP11Q15643 1979 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 ARHGEF15O94989 841 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 APBB3O95704 486 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 SLC3A2P08195 630 aaKnown RBP4.6□□□□□ -1.67
SCN3A-209ENST00000639244 AXLP30530 894 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms