RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 CDH16O75309 829 aa16.05■□□□□ 0.16
UBE3A-227ENST00000638011 ANXA13P27216 316 aa16.05■□□□□ 0.16
UBE3A-227ENST00000638011 ACTN3Q08043 901 aaPredicted RBP16.05■□□□□ 0.16
UBE3A-227ENST00000638011 NAA35Q5VZE5 725 aa16.05■□□□□ 0.16
UBE3A-227ENST00000638011 MTO1Q9Y2Z2 717 aaKnown RBP16.05■□□□□ 0.16
UBE3A-227ENST00000638011 TLR3O15455 904 aaKnown RBP16.05■□□□□ 0.16
UBE3A-227ENST00000638011 MTMR6Q9Y217 621 aa16.05■□□□□ 0.16
UBE3A-227ENST00000638011 SEC24BO95487 1268 aa16.05■□□□□ 0.16
UBE3A-227ENST00000638011 MRPL48Q96GC5 212 aaKnown RBP16.05■□□□□ 0.16
UBE3A-227ENST00000638011 MAGED4Q96JG8 741 aa16.05■□□□□ 0.16
UBE3A-227ENST00000638011 APOL4Q9BPW4 351 aa16.05■□□□□ 0.16
UBE3A-227ENST00000638011 TRIM24O15164 1050 aa16.05■□□□□ 0.16
UBE3A-227ENST00000638011 DLATP10515 647 aaKnown RBP16.05■□□□□ 0.16
UBE3A-227ENST00000638011 PTGDRQ13258 359 aa16.05■□□□□ 0.16
UBE3A-227ENST00000638011 SPATA21Q7Z572 469 aa16.05■□□□□ 0.16
UBE3A-227ENST00000638011 MCRS1Q96EZ8 462 aa16.05■□□□□ 0.16
UBE3A-227ENST00000638011 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.05■□□□□ 0.16
UBE3A-227ENST00000638011 APPL1Q9UKG1 709 aa16.05■□□□□ 0.16
UBE3A-227ENST00000638011 IVNS1ABPQ9Y6Y0 642 aa16.05■□□□□ 0.16
UBE3A-227ENST00000638011 NAALADL2Q58DX5 795 aa16.05■□□□□ 0.16
UBE3A-227ENST00000638011 USHBP1Q8N6Y0 703 aa16.05■□□□□ 0.16
UBE3A-227ENST00000638011 PCDHGB4Q9UN71 923 aa16.05■□□□□ 0.16
UBE3A-227ENST00000638011 TFDP1Q14186 410 aa16.04■□□□□ 0.16
UBE3A-227ENST00000638011 DNAJC12Q9UKB3 198 aa16.04■□□□□ 0.16
UBE3A-227ENST00000638011 PDE9AO76083 593 aa16.04■□□□□ 0.16
UBE3A-227ENST00000638011 ZNF654Q8IZM8 581 aa16.04■□□□□ 0.16
UBE3A-227ENST00000638011 CHURC1Q8WUH1 139 aa16.04■□□□□ 0.16
UBE3A-227ENST00000638011 SCFD1Q8WVM8 642 aa16.04■□□□□ 0.16
UBE3A-227ENST00000638011 RNF26Q9BY78 433 aaPredicted RBP16.04■□□□□ 0.16
UBE3A-227ENST00000638011 ZSCAN9O15535 394 aaPredicted RBP16.04■□□□□ 0.16
UBE3A-227ENST00000638011 CCDC149Q6ZUS6 474 aa16.04■□□□□ 0.16
UBE3A-227ENST00000638011 LRRC39Q96DD0 335 aa16.04■□□□□ 0.16
UBE3A-227ENST00000638011 SYTL2Q9HCH5 934 aa16.04■□□□□ 0.16
UBE3A-227ENST00000638011 LAMC1P11047 1609 aa16.04■□□□□ 0.16
UBE3A-227ENST00000638011 UBN2Q6ZU65 1347 aa16.04■□□□□ 0.16
UBE3A-227ENST00000638011 KANSL1LA0AUZ9 987 aa16.04■□□□□ 0.16
UBE3A-227ENST00000638011 WDR91A4D1P6 747 aa16.04■□□□□ 0.16
UBE3A-227ENST00000638011 CTTNQ14247 550 aaKnown RBP16.04■□□□□ 0.16
UBE3A-227ENST00000638011 AFAP1Q8N556 730 aa16.04■□□□□ 0.16
UBE3A-227ENST00000638011 FSD1LQ9BXM9 530 aa16.04■□□□□ 0.16
UBE3A-227ENST00000638011 CALN1Q9BXU9 219 aa16.04■□□□□ 0.16
UBE3A-227ENST00000638011 PIGUQ9H490 435 aa16.04■□□□□ 0.16
UBE3A-227ENST00000638011 EMILIN1Q9Y6C2 1016 aa16.04■□□□□ 0.16
UBE3A-227ENST00000638011 HNRNPDLO14979 420 aaKnown RBP16.04■□□□□ 0.16
UBE3A-227ENST00000638011 CORO7P57737 925 aa16.04■□□□□ 0.16
UBE3A-227ENST00000638011 FAM69CQ0P6D2 419 aa16.04■□□□□ 0.16
UBE3A-227ENST00000638011 EPS8Q12929 822 aa16.04■□□□□ 0.16
UBE3A-227ENST00000638011 HIF1AQ16665 826 aa16.04■□□□□ 0.16
UBE3A-227ENST00000638011 AARS2Q5JTZ9 985 aaKnown RBP16.04■□□□□ 0.16
UBE3A-227ENST00000638011 ARL6IP4Q66PJ3 421 aaKnown RBP16.04■□□□□ 0.16
UBE3A-227ENST00000638011 C16orf71Q8IYS4 520 aaPredicted RBP16.04■□□□□ 0.16
UBE3A-227ENST00000638011 B4GALNT2Q8NHY0 566 aa16.04■□□□□ 0.16
UBE3A-227ENST00000638011 USP33Q8TEY7 942 aa16.04■□□□□ 0.16
UBE3A-227ENST00000638011 TINF2Q9BSI4 451 aa16.04■□□□□ 0.16
UBE3A-227ENST00000638011 CXCR5P32302 372 aa16.04■□□□□ 0.16
UBE3A-227ENST00000638011 TALDO1P37837 337 aa16.04■□□□□ 0.16
UBE3A-227ENST00000638011 UHMK1Q8TAS1 419 aaKnown RBP16.04■□□□□ 0.16
UBE3A-227ENST00000638011 MLPHQ9BV36 600 aaPredicted RBP16.04■□□□□ 0.16
UBE3A-227ENST00000638011 KLHL25Q9H0H3 589 aa16.04■□□□□ 0.16
UBE3A-227ENST00000638011 VPS54Q9P1Q0 977 aa16.04■□□□□ 0.16
UBE3A-227ENST00000638011 PLCH2O75038 1416 aa16.04■□□□□ 0.16
UBE3A-227ENST00000638011 RAPGEF6Q8TEU7 1601 aa16.04■□□□□ 0.16
UBE3A-227ENST00000638011 CLASP1Q7Z460 1538 aa16.04■□□□□ 0.16
UBE3A-227ENST00000638011 VAMP4O75379 141 aa16.04■□□□□ 0.16
UBE3A-227ENST00000638011 SP4Q02446 784 aa16.04■□□□□ 0.16
UBE3A-227ENST00000638011 TTC39CQ8N584 583 aa16.04■□□□□ 0.16
UBE3A-227ENST00000638011 CCT8L2Q96SF2 557 aa16.04■□□□□ 0.16
UBE3A-227ENST00000638011 PSTPIP2Q9H939 334 aa16.04■□□□□ 0.16
UBE3A-227ENST00000638011 ARHGEF3Q9NR81 526 aa16.04■□□□□ 0.16
UBE3A-227ENST00000638011 CDY2AQ9Y6F7 541 aa16.04■□□□□ 0.16
UBE3A-227ENST00000638011 CDY1Q9Y6F8 540 aa16.04■□□□□ 0.16
UBE3A-227ENST00000638011 WNT8AQ9H1J5 351 aa16.03■□□□□ 0.16
UBE3A-227ENST00000638011 ABCC2Q92887 1545 aa16.03■□□□□ 0.16
UBE3A-227ENST00000638011 EYA2O00167 538 aa16.03■□□□□ 0.16
UBE3A-227ENST00000638011 TAP1Q03518 808 aa16.03■□□□□ 0.16
UBE3A-227ENST00000638011 TUBGCP4Q9UGJ1 667 aa16.03■□□□□ 0.16
UBE3A-227ENST00000638011 MAP3K15Q6ZN16 1313 aa16.03■□□□□ 0.16
UBE3A-227ENST00000638011 DNALI1O14645 258 aaPredicted RBP16.03■□□□□ 0.16
UBE3A-227ENST00000638011 ZBTB7BO15156 539 aaPredicted RBP16.03■□□□□ 0.16
UBE3A-227ENST00000638011 PLA2G4DQ86XP0 818 aa16.03■□□□□ 0.16
UBE3A-227ENST00000638011 ZSCAN10Q96SZ4 725 aaPredicted RBP16.03■□□□□ 0.16
UBE3A-227ENST00000638011 TRIM54Q9BYV2 358 aa16.03■□□□□ 0.16
UBE3A-227ENST00000638011 RHBDL2Q9NX52 303 aa16.03■□□□□ 0.16
UBE3A-227ENST00000638011 ZBED4O75132 1171 aa16.03■□□□□ 0.16
UBE3A-227ENST00000638011 CLEC4FQ8N1N0 589 aa16.03■□□□□ 0.16
UBE3A-227ENST00000638011 SEPT1Q8WYJ6 367 aa16.03■□□□□ 0.16
UBE3A-227ENST00000638011 NRDE2Q9H7Z3 1164 aa16.03■□□□□ 0.16
UBE3A-227ENST00000638011 SOWAHDA6NJG2 315 aa16.03■□□□□ 0.16
UBE3A-227ENST00000638011 IL12RB1P42701 662 aa16.03■□□□□ 0.16
UBE3A-227ENST00000638011 CCNYQ8ND76 341 aa16.03■□□□□ 0.16
UBE3A-227ENST00000638011 CYGBQ8WWM9 190 aa16.03■□□□□ 0.16
UBE3A-227ENST00000638011 HACD3Q9P035 362 aa16.03■□□□□ 0.16
UBE3A-227ENST00000638011 MFAP3LO75121 409 aa16.03■□□□□ 0.16
UBE3A-227ENST00000638011 ABCB1P08183 1280 aaPredicted RBP16.03■□□□□ 0.16
UBE3A-227ENST00000638011 BBS7Q8IWZ6 715 aa16.03■□□□□ 0.16
UBE3A-227ENST00000638011 TRIM62Q9BVG3 475 aa16.03■□□□□ 0.16
UBE3A-227ENST00000638011 SPAG6O75602 509 aa16.02■□□□□ 0.16
UBE3A-227ENST00000638011 PSMC6P62333 389 aa16.02■□□□□ 0.16
UBE3A-227ENST00000638011 NCF4Q15080 339 aa16.02■□□□□ 0.16
UBE3A-227ENST00000638011 SGSM1Q2NKQ1 1148 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms