RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 MEIS3P2A8K0S8 358 aa8.83□□□□□ -1
PNKP-229ENST00000637897 H3BQ06 376 aaPredicted RBP8.83□□□□□ -1
PNKP-229ENST00000637897 CPLX1O14810 134 aa8.83□□□□□ -1
PNKP-229ENST00000637897 B4GALT3O60512 393 aa8.83□□□□□ -1
PNKP-229ENST00000637897 TBX10O75333 385 aa8.83□□□□□ -1
PNKP-229ENST00000637897 GLP2RO95838 553 aa8.83□□□□□ -1
PNKP-229ENST00000637897 MMP1P03956 469 aa8.83□□□□□ -1
PNKP-229ENST00000637897 RB1P06400 928 aa8.83□□□□□ -1
PNKP-229ENST00000637897 HSP90AA1P07900 732 aaKnown RBP8.83□□□□□ -1
PNKP-229ENST00000637897 DARSP14868 501 aaKnown RBP8.83□□□□□ -1
PNKP-229ENST00000637897 KCNA5P22460 613 aa8.83□□□□□ -1
PNKP-229ENST00000637897 CTNNB1P35222 781 aa8.83□□□□□ -1
PNKP-229ENST00000637897 NPEPPSP55786 919 aa8.83□□□□□ -1
PNKP-229ENST00000637897 PPP2R5CQ13362 524 aa8.83□□□□□ -1
PNKP-229ENST00000637897 NONOQ15233 471 aaKnown RBP eCLIP8.83□□□□□ -1
PNKP-229ENST00000637897 LETM2Q2VYF4 491 aa8.83□□□□□ -1
PNKP-229ENST00000637897 PPP4R3AQ6IN85 833 aa8.83□□□□□ -1
PNKP-229ENST00000637897 GALNT17Q6IS24 598 aa8.83□□□□□ -1
PNKP-229ENST00000637897 PIK3AP1Q6ZUJ8 805 aa8.83□□□□□ -1
PNKP-229ENST00000637897 CKAP2LQ8IYA6 745 aa8.83□□□□□ -1
PNKP-229ENST00000637897 TRIM22Q8IYM9 498 aa8.83□□□□□ -1
PNKP-229ENST00000637897 METTL13Q8N6R0 699 aa8.83□□□□□ -1
PNKP-229ENST00000637897 KLHL23Q8NBE8 558 aa8.83□□□□□ -1
PNKP-229ENST00000637897 VN1R2Q8NFZ6 395 aa8.83□□□□□ -1
PNKP-229ENST00000637897 FEZF2Q8TBJ5 459 aa8.83□□□□□ -1
PNKP-229ENST00000637897 RGL1Q9NZL6 768 aa8.83□□□□□ -1
PNKP-229ENST00000637897 ORC3Q9UBD5 711 aaPredicted RBP8.83□□□□□ -1
PNKP-229ENST00000637897 DDX25Q9UHL0 483 aaKnown RBP8.83□□□□□ -1
PNKP-229ENST00000637897 A0A087WWV3 80 aa8.82□□□□□ -1
PNKP-229ENST00000637897 GRXCR2A6NFK2 248 aa8.82□□□□□ -1
PNKP-229ENST00000637897 BTBD18B2RXH4 712 aa8.82□□□□□ -1
PNKP-229ENST00000637897 MAGEB2O15479 319 aa8.82□□□□□ -1
PNKP-229ENST00000637897 CSPG5O95196 566 aa8.82□□□□□ -1
PNKP-229ENST00000637897 RPLP2P05387 115 aaKnown RBP8.82□□□□□ -1
PNKP-229ENST00000637897 EIF4BP23588 611 aaKnown RBP8.82□□□□□ -1
PNKP-229ENST00000637897 SFNP31947 248 aa8.82□□□□□ -1
PNKP-229ENST00000637897 AFF1P51825 1210 aaKnown RBP8.82□□□□□ -1
PNKP-229ENST00000637897 JAK3P52333 1124 aa8.82□□□□□ -1
PNKP-229ENST00000637897 ERVFC1P60507 584 aa8.82□□□□□ -1
PNKP-229ENST00000637897 KCNC3Q14003 757 aa8.82□□□□□ -1
PNKP-229ENST00000637897 NFKBIBQ15653 356 aa8.82□□□□□ -1
PNKP-229ENST00000637897 MTERF2Q49AM1 385 aa8.82□□□□□ -1
PNKP-229ENST00000637897 CLLU1OSQ5K130 101 aa8.82□□□□□ -1
PNKP-229ENST00000637897 SLC24A5Q71RS6 500 aa8.82□□□□□ -1
PNKP-229ENST00000637897 MIER3Q7Z3K6 550 aa8.82□□□□□ -1
PNKP-229ENST00000637897 KRT25Q7Z3Z0 450 aa8.82□□□□□ -1
PNKP-229ENST00000637897 NEK8Q86SG6 692 aa8.82□□□□□ -1
PNKP-229ENST00000637897 FAM178BQ8IXR5 827 aa8.82□□□□□ -1
PNKP-229ENST00000637897 FAM177A1Q8N128 213 aaPredicted RBP8.82□□□□□ -1
PNKP-229ENST00000637897 RDM1Q8NG50 284 aa8.82□□□□□ -1
PNKP-229ENST00000637897 P2RX5Q93086 422 aa8.82□□□□□ -1
PNKP-229ENST00000637897 PABPC5Q96DU9 382 aaKnown RBP8.82□□□□□ -1
PNKP-229ENST00000637897 TMEM60Q9H2L4 133 aa8.82□□□□□ -1
PNKP-229ENST00000637897 NSUN3Q9H649 340 aaKnown RBP8.82□□□□□ -1
PNKP-229ENST00000637897 MINDY3Q9H8M7 445 aa8.82□□□□□ -1
PNKP-229ENST00000637897 IFT122Q9HBG6 1241 aa8.82□□□□□ -1
PNKP-229ENST00000637897 XPNPEP1Q9NQW7 623 aa8.82□□□□□ -1
PNKP-229ENST00000637897 TYW1Q9NV66 732 aaKnown RBP8.82□□□□□ -1
PNKP-229ENST00000637897 CLEC1BQ9P126 229 aa8.82□□□□□ -1
PNKP-229ENST00000637897 SAMM50Q9Y512 469 aa8.82□□□□□ -1
PNKP-229ENST00000637897 A0A087WZ62 844 aa8.81□□□□□ -1
PNKP-229ENST00000637897 FSCN2O14926 492 aa8.81□□□□□ -1
PNKP-229ENST00000637897 MAFO75444 373 aaPredicted RBP8.81□□□□□ -1
PNKP-229ENST00000637897 SLITRK3O94933 977 aa8.81□□□□□ -1
PNKP-229ENST00000637897 IBSPP21815 317 aaPredicted RBP8.81□□□□□ -1
PNKP-229ENST00000637897 HOXD11P31277 338 aaPredicted RBP8.81□□□□□ -1
PNKP-229ENST00000637897 DDIT3P35638 169 aa8.81□□□□□ -1
PNKP-229ENST00000637897 PBX3P40426 434 aa8.81□□□□□ -1
PNKP-229ENST00000637897 NEK4P51957 841 aa8.81□□□□□ -1
PNKP-229ENST00000637897 FOSBP53539 338 aa8.81□□□□□ -1
PNKP-229ENST00000637897 ADAM15Q13444 863 aa8.81□□□□□ -1
PNKP-229ENST00000637897 XKR3Q5GH77 459 aa8.81□□□□□ -1
PNKP-229ENST00000637897 TMEM173Q86WV6 379 aaPredicted RBP8.81□□□□□ -1
PNKP-229ENST00000637897 ECHDC2Q86YB7 292 aa8.81□□□□□ -1
PNKP-229ENST00000637897 POF1BQ8WVV4 589 aa8.81□□□□□ -1
PNKP-229ENST00000637897 FAM122AQ96E09 287 aa8.81□□□□□ -1
PNKP-229ENST00000637897 MSLNLQ96KJ4 702 aa8.81□□□□□ -1
PNKP-229ENST00000637897 FAM167AQ96KS9 214 aa8.81□□□□□ -1
PNKP-229ENST00000637897 MTMR9Q96QG7 549 aa8.81□□□□□ -1
PNKP-229ENST00000637897 FDXACB1Q9BRP7 624 aaPredicted RBP8.81□□□□□ -1
PNKP-229ENST00000637897 PLVAPQ9BX97 442 aa8.81□□□□□ -1
PNKP-229ENST00000637897 DHX33Q9H6R0 707 aaKnown RBP8.81□□□□□ -1
PNKP-229ENST00000637897 ELAC1Q9H777 363 aaKnown RBP8.81□□□□□ -1
PNKP-229ENST00000637897 NRBP2Q9NSY0 501 aa8.81□□□□□ -1
PNKP-229ENST00000637897 TMEM161AQ9NX61 479 aa8.81□□□□□ -1
PNKP-229ENST00000637897 SEPT9Q9UHD8 586 aaPredicted RBP8.81□□□□□ -1
PNKP-229ENST00000637897 CEP131Q9UPN4 1083 aa8.81□□□□□ -1
PNKP-229ENST00000637897 AKT3Q9Y243 479 aa8.81□□□□□ -1
PNKP-229ENST00000637897 ARID2Q68CP9 1835 aa8.8□□□□□ -1
PNKP-229ENST00000637897 C19orf67A6NJJ6 358 aa8.8□□□□□ -1
PNKP-229ENST00000637897 TBKBP1A7MCY6 615 aa8.8□□□□□ -1
PNKP-229ENST00000637897 M0QZ92 97 aa8.8□□□□□ -1
PNKP-229ENST00000637897 GPR182O15218 404 aa8.8□□□□□ -1
PNKP-229ENST00000637897 CCNT1O60563 726 aaKnown RBP8.8□□□□□ -1
PNKP-229ENST00000637897 CD2BP2O95400 341 aaKnown RBP8.8□□□□□ -1
PNKP-229ENST00000637897 HOXA11P31270 313 aaPredicted RBP8.8□□□□□ -1
PNKP-229ENST00000637897 PSMC5P62195 406 aa8.8□□□□□ -1
PNKP-229ENST00000637897 TBC1D8BQ0IIM8 1120 aa8.8□□□□□ -1
PNKP-229ENST00000637897 CTTNQ14247 550 aaKnown RBP8.8□□□□□ -1
PNKP-229ENST00000637897 TIGD5Q53EQ6 642 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms