RNA–Protein interactions for RNA: ENST00000637616.1

CACNA1A-243, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-243ENST00000637616 ZNF335Q9H4Z2 1342 aaPredicted RBP21.9■■□□□ 1.1
CACNA1A-243ENST00000637616 KDM3AQ9Y4C1 1321 aa21.9■■□□□ 1.1
CACNA1A-243ENST00000637616 DNAJC8O75937 253 aaPredicted RBP21.89■■□□□ 1.1
CACNA1A-243ENST00000637616 GCNT3O95395 438 aa21.89■■□□□ 1.1
CACNA1A-243ENST00000637616 CLK2P49760 499 aaKnown RBP21.89■■□□□ 1.1
CACNA1A-243ENST00000637616 KLRC3Q07444 240 aa21.89■■□□□ 1.1
CACNA1A-243ENST00000637616 NEK9Q8TD19 979 aa21.89■■□□□ 1.1
CACNA1A-243ENST00000637616 THAP2Q9H0W7 228 aa21.89■■□□□ 1.1
CACNA1A-243ENST00000637616 CDC25CP30307 473 aa21.89■■□□□ 1.09
CACNA1A-243ENST00000637616 MMP14P50281 582 aa21.89■■□□□ 1.09
CACNA1A-243ENST00000637616 PTENP60484 403 aa21.89■■□□□ 1.09
CACNA1A-243ENST00000637616 SNAP25P60880 206 aa21.89■■□□□ 1.09
CACNA1A-243ENST00000637616 NAA25Q14CX7 972 aa21.89■■□□□ 1.09
CACNA1A-243ENST00000637616 ARMC9Q7Z3E5 817 aa21.89■■□□□ 1.09
CACNA1A-243ENST00000637616 JAMLQ86YT9 394 aa21.89■■□□□ 1.09
CACNA1A-243ENST00000637616 CCDC50Q8IVM0 306 aa21.89■■□□□ 1.09
CACNA1A-243ENST00000637616 ZC3H3Q8IXZ2 948 aaKnown RBP21.89■■□□□ 1.09
CACNA1A-243ENST00000637616 ANKS4BQ8N8V4 417 aa21.89■■□□□ 1.09
CACNA1A-243ENST00000637616 RAB17Q9H0T7 212 aa21.89■■□□□ 1.09
CACNA1A-243ENST00000637616 PABPC3Q9H361 631 aaKnown RBP21.89■■□□□ 1.09
CACNA1A-243ENST00000637616 MRPL12P52815 198 aaKnown RBP21.88■■□□□ 1.09
CACNA1A-243ENST00000637616 MYO1EQ12965 1108 aa21.88■■□□□ 1.09
CACNA1A-243ENST00000637616 PRR16Q569H4 304 aa21.88■■□□□ 1.09
CACNA1A-243ENST00000637616 ZDHHC24Q6UX98 284 aa21.88■■□□□ 1.09
CACNA1A-243ENST00000637616 OTUD6AQ7L8S5 288 aa21.88■■□□□ 1.09
CACNA1A-243ENST00000637616 RPAINQ86UA6 219 aa21.88■■□□□ 1.09
CACNA1A-243ENST00000637616 HOOK3Q86VS8 718 aa21.88■■□□□ 1.09
CACNA1A-243ENST00000637616 COG5Q9UP83 839 aa21.88■■□□□ 1.09
CACNA1A-243ENST00000637616 TAL1P17542 331 aaPredicted RBP21.88■■□□□ 1.09
CACNA1A-243ENST00000637616 STAT1P42224 750 aa21.88■■□□□ 1.09
CACNA1A-243ENST00000637616 MARCKSL1P49006 195 aa21.88■■□□□ 1.09
CACNA1A-243ENST00000637616 RHBDL3P58872 404 aa21.88■■□□□ 1.09
CACNA1A-243ENST00000637616 ARHGAP44Q17R89 818 aa21.88■■□□□ 1.09
CACNA1A-243ENST00000637616 HYIQ5T013 277 aa21.88■■□□□ 1.09
CACNA1A-243ENST00000637616 PTF1AQ7RTS3 328 aa21.88■■□□□ 1.09
CACNA1A-243ENST00000637616 TRAF3IP3Q9Y228 551 aa21.88■■□□□ 1.09
CACNA1A-243ENST00000637616 PLCG2P16885 1265 aa21.88■■□□□ 1.09
CACNA1A-243ENST00000637616 OLIG1Q8TAK6 271 aa21.88■■□□□ 1.09
CACNA1A-243ENST00000637616 ASTN1O14525 1302 aa21.87■■□□□ 1.09
CACNA1A-243ENST00000637616 MMP13P45452 471 aa21.87■■□□□ 1.09
CACNA1A-243ENST00000637616 EIF3BP55884 814 aaKnown RBP21.87■■□□□ 1.09
CACNA1A-243ENST00000637616 KCNJ2P63252 427 aa21.87■■□□□ 1.09
CACNA1A-243ENST00000637616 PLS1Q14651 629 aa21.87■■□□□ 1.09
CACNA1A-243ENST00000637616 ASPRV1Q53RT3 343 aa21.87■■□□□ 1.09
CACNA1A-243ENST00000637616 KIAA1755Q5JYT7 1200 aa21.87■■□□□ 1.09
CACNA1A-243ENST00000637616 PPP4R3CPQ6ZMV5 832 aa21.87■■□□□ 1.09
CACNA1A-243ENST00000637616 TAX1BP1Q86VP1 789 aa21.87■■□□□ 1.09
CACNA1A-243ENST00000637616 CCDC25Q86WR0 208 aa21.87■■□□□ 1.09
CACNA1A-243ENST00000637616 CTNNBL1Q8WYA6 563 aaPredicted RBP21.87■■□□□ 1.09
CACNA1A-243ENST00000637616 PTPN22Q9Y2R2 807 aa21.87■■□□□ 1.09
CACNA1A-243ENST00000637616 LAMB2P55268 1798 aa21.87■■□□□ 1.09
CACNA1A-243ENST00000637616 LRRN2O75325 713 aa21.87■■□□□ 1.09
CACNA1A-243ENST00000637616 GCFC2P16383 781 aaKnown RBP21.87■■□□□ 1.09
CACNA1A-243ENST00000637616 COG2Q14746 738 aa21.87■■□□□ 1.09
CACNA1A-243ENST00000637616 DRAP1Q14919 205 aaPredicted RBP21.87■■□□□ 1.09
CACNA1A-243ENST00000637616 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.87■■□□□ 1.09
CACNA1A-243ENST00000637616 ROBO1Q9Y6N7 1651 aa21.87■■□□□ 1.09
CACNA1A-243ENST00000637616 RPTORQ8N122 1335 aa21.86■■□□□ 1.09
CACNA1A-243ENST00000637616 GPR75-ASB3A0A0A6YYF3 556 aa21.86■■□□□ 1.09
CACNA1A-243ENST00000637616 MPHOSPH10O00566 681 aaKnown RBP21.86■■□□□ 1.09
CACNA1A-243ENST00000637616 KIAA0391O15091 583 aaKnown RBP21.86■■□□□ 1.09
CACNA1A-243ENST00000637616 ZNF543Q08ER8 600 aa21.86■■□□□ 1.09
CACNA1A-243ENST00000637616 ZC2HC1CQ53FD0 456 aaPredicted RBP21.86■■□□□ 1.09
CACNA1A-243ENST00000637616 PIGWQ7Z7B1 504 aa21.86■■□□□ 1.09
CACNA1A-243ENST00000637616 KRT35Q92764 455 aa21.86■■□□□ 1.09
CACNA1A-243ENST00000637616 BHMT2Q9H2M3 363 aa21.86■■□□□ 1.09
CACNA1A-243ENST00000637616 SAMD15Q9P1V8 674 aa21.86■■□□□ 1.09
CACNA1A-243ENST00000637616 DNAJC12Q9UKB3 198 aa21.86■■□□□ 1.09
CACNA1A-243ENST00000637616 DDX60LQ5H9U9 1706 aaKnown RBP21.86■■□□□ 1.09
CACNA1A-243ENST00000637616 GHRP10912 638 aa21.86■■□□□ 1.09
CACNA1A-243ENST00000637616 RPL21P46778 160 aaKnown RBP21.86■■□□□ 1.09
CACNA1A-243ENST00000637616 TPTE2Q6XPS3 522 aa21.86■■□□□ 1.09
CACNA1A-243ENST00000637616 CALUO43852 315 aaPredicted RBP21.86■■□□□ 1.09
CACNA1A-243ENST00000637616 CREB1P16220 341 aa21.86■■□□□ 1.09
CACNA1A-243ENST00000637616 SLC8A1P32418 973 aa21.86■■□□□ 1.09
CACNA1A-243ENST00000637616 TLDC1Q6P9B6 456 aa21.86■■□□□ 1.09
CACNA1A-243ENST00000637616 TRPM8Q7Z2W7 1104 aa21.86■■□□□ 1.09
CACNA1A-243ENST00000637616 AMIGO3Q86WK7 504 aa21.86■■□□□ 1.09
CACNA1A-243ENST00000637616 ZDHHC14Q8IZN3 488 aa21.86■■□□□ 1.09
CACNA1A-243ENST00000637616 KIF2BQ8N4N8 673 aa21.86■■□□□ 1.09
CACNA1A-243ENST00000637616 SLC30A5Q8TAD4 765 aa21.86■■□□□ 1.09
CACNA1A-243ENST00000637616 PRCCQ92733 491 aaPredicted RBP21.86■■□□□ 1.09
CACNA1A-243ENST00000637616 P2RX7Q99572 595 aaKnown RBP21.86■■□□□ 1.09
CACNA1A-243ENST00000637616 RUSC1Q9BVN2 902 aa21.86■■□□□ 1.09
CACNA1A-243ENST00000637616 A0A0A6YYK5 440 aaPredicted RBP21.85■■□□□ 1.09
CACNA1A-243ENST00000637616 hCG_1984214I3L0E3 225 aa21.85■■□□□ 1.09
CACNA1A-243ENST00000637616 TRIM49P0CI25 452 aa21.85■■□□□ 1.09
CACNA1A-243ENST00000637616 TRIM49CP0CI26 452 aa21.85■■□□□ 1.09
CACNA1A-243ENST00000637616 MFSD14BQ5SR56 506 aa21.85■■□□□ 1.09
CACNA1A-243ENST00000637616 ZNF804AQ7Z570 1209 aa21.85■■□□□ 1.09
CACNA1A-243ENST00000637616 ZNF713Q8N859 430 aaPredicted RBP21.85■■□□□ 1.09
CACNA1A-243ENST00000637616 NSMCE1Q8WV22 266 aa21.85■■□□□ 1.09
CACNA1A-243ENST00000637616 RFFLQ8WZ73 363 aa21.85■■□□□ 1.09
CACNA1A-243ENST00000637616 SLC24A3Q9HC58 644 aa21.85■■□□□ 1.09
CACNA1A-243ENST00000637616 SLC12A4Q9UP95 1085 aa21.85■■□□□ 1.09
CACNA1A-243ENST00000637616 DNM3Q9UQ16 869 aa21.85■■□□□ 1.09
CACNA1A-243ENST00000637616 UBOX5O94941 541 aa21.85■■□□□ 1.09
CACNA1A-243ENST00000637616 FERP16591 822 aa21.85■■□□□ 1.09
CACNA1A-243ENST00000637616 NMT1P30419 496 aaKnown RBP21.85■■□□□ 1.09
CACNA1A-243ENST00000637616 PPATQ06203 517 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms