RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-238ENST00000637276 JPH2Q9BR39 696 aaPredicted RBP17.47■□□□□ 0.39
CACNA1A-238ENST00000637276 TRIM8Q9BZR9 551 aa17.47■□□□□ 0.39
CACNA1A-238ENST00000637276 C21orf2O43822 256 aa17.47■□□□□ 0.39
CACNA1A-238ENST00000637276 SCRN1Q12765 414 aa17.47■□□□□ 0.39
CACNA1A-238ENST00000637276 SCARA3Q6AZY7 606 aa17.47■□□□□ 0.39
CACNA1A-238ENST00000637276 CACUL1Q86Y37 369 aa17.47■□□□□ 0.39
CACNA1A-238ENST00000637276 GPT2Q8TD30 523 aa17.47■□□□□ 0.39
CACNA1A-238ENST00000637276 ZNF496Q96IT1 587 aaPredicted RBP17.47■□□□□ 0.39
CACNA1A-238ENST00000637276 RAVER2Q9HCJ3 691 aaKnown RBP17.47■□□□□ 0.39
CACNA1A-238ENST00000637276 HSPBP1Q9NZL4 362 aa17.47■□□□□ 0.39
CACNA1A-238ENST00000637276 SUN1O94901 812 aa17.47■□□□□ 0.39
CACNA1A-238ENST00000637276 WEE1P30291 646 aa17.47■□□□□ 0.39
CACNA1A-238ENST00000637276 ALDH18A1P54886 795 aaKnown RBP17.47■□□□□ 0.39
CACNA1A-238ENST00000637276 TMPRSS15P98073 1019 aa17.47■□□□□ 0.39
CACNA1A-238ENST00000637276 PMM1Q92871 262 aa17.47■□□□□ 0.39
CACNA1A-238ENST00000637276 TMEM106CQ9BVX2 250 aa17.47■□□□□ 0.39
CACNA1A-238ENST00000637276 A0A1W2PP64 1363 aa17.47■□□□□ 0.39
CACNA1A-238ENST00000637276 WDR47O94967 919 aa17.47■□□□□ 0.39
CACNA1A-238ENST00000637276 COPB1P53618 953 aaKnown RBP17.47■□□□□ 0.39
CACNA1A-238ENST00000637276 ANKS3Q6ZW76 656 aa17.47■□□□□ 0.39
CACNA1A-238ENST00000637276 COMMD2Q86X83 199 aa17.47■□□□□ 0.39
CACNA1A-238ENST00000637276 FAM167BQ9BTA0 163 aa17.47■□□□□ 0.39
CACNA1A-238ENST00000637276 PARVBQ9HBI1 364 aa17.47■□□□□ 0.39
CACNA1A-238ENST00000637276 PARNO95453 639 aaKnown RBP17.46■□□□□ 0.39
CACNA1A-238ENST00000637276 GYS1P13807 737 aa17.46■□□□□ 0.39
CACNA1A-238ENST00000637276 ELMSAN1Q6PJG2 1045 aa17.46■□□□□ 0.39
CACNA1A-238ENST00000637276 E2F4Q16254 413 aa17.46■□□□□ 0.39
CACNA1A-238ENST00000637276 TTC23LQ6PF05 361 aa17.46■□□□□ 0.39
CACNA1A-238ENST00000637276 TADA2BQ86TJ2 420 aa17.46■□□□□ 0.39
CACNA1A-238ENST00000637276 CARD14Q9BXL6 1004 aa17.46■□□□□ 0.39
CACNA1A-238ENST00000637276 SAYSD1Q9NPB0 183 aa17.46■□□□□ 0.39
CACNA1A-238ENST00000637276 TAC1P20366 129 aa17.46■□□□□ 0.39
CACNA1A-238ENST00000637276 CYTH1Q15438 398 aa17.46■□□□□ 0.39
CACNA1A-238ENST00000637276 RAET1EQ8TD07 263 aa17.46■□□□□ 0.39
CACNA1A-238ENST00000637276 JADE3Q92613 823 aa17.46■□□□□ 0.39
CACNA1A-238ENST00000637276 TCN1P20061 433 aaPredicted RBP17.46■□□□□ 0.39
CACNA1A-238ENST00000637276 ETFBP38117 255 aa17.46■□□□□ 0.39
CACNA1A-238ENST00000637276 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.46■□□□□ 0.39
CACNA1A-238ENST00000637276 FRMD6Q96NE9 622 aa17.46■□□□□ 0.39
CACNA1A-238ENST00000637276 EPN1Q9Y6I3 576 aaPredicted RBP17.46■□□□□ 0.39
CACNA1A-238ENST00000637276 ARF5P84085 180 aa17.46■□□□□ 0.39
CACNA1A-238ENST00000637276 MTM1Q13496 603 aa17.46■□□□□ 0.39
CACNA1A-238ENST00000637276 PAWRQ96IZ0 340 aaKnown RBP17.46■□□□□ 0.39
CACNA1A-238ENST00000637276 UNC45AQ9H3U1 944 aa17.46■□□□□ 0.39
CACNA1A-238ENST00000637276 SLC10A5Q5PT55 438 aa17.45■□□□□ 0.38
CACNA1A-238ENST00000637276 APPL2Q8NEU8 664 aa17.45■□□□□ 0.38
CACNA1A-238ENST00000637276 RSPH9Q9H1X1 276 aaPredicted RBP17.45■□□□□ 0.38
CACNA1A-238ENST00000637276 PCDHA7Q9UN72 937 aa17.45■□□□□ 0.38
CACNA1A-238ENST00000637276 IFT140Q96RY7 1462 aa17.45■□□□□ 0.38
CACNA1A-238ENST00000637276 MED7O43513 233 aa17.45■□□□□ 0.38
CACNA1A-238ENST00000637276 DHX9Q08211 1270 aaKnown RBP17.45■□□□□ 0.38
CACNA1A-238ENST00000637276 SNX31Q8N9S9 440 aa17.45■□□□□ 0.38
CACNA1A-238ENST00000637276 PNKPQ96T60 521 aa17.45■□□□□ 0.38
CACNA1A-238ENST00000637276 TRIM15Q9C019 465 aa17.45■□□□□ 0.38
CACNA1A-238ENST00000637276 NOVA2Q9UNW9 492 aaKnown RBP17.45■□□□□ 0.38
CACNA1A-238ENST00000637276 AARSP49588 968 aaKnown RBP eCLIP17.45■□□□□ 0.38
CACNA1A-238ENST00000637276 GSPT2Q8IYD1 628 aaKnown RBP17.45■□□□□ 0.38
CACNA1A-238ENST00000637276 BBS2Q9BXC9 721 aa17.45■□□□□ 0.38
CACNA1A-238ENST00000637276 ARHGEF3Q9NR81 526 aa17.45■□□□□ 0.38
CACNA1A-238ENST00000637276 SASH1O94885 1247 aa17.45■□□□□ 0.38
CACNA1A-238ENST00000637276 SCG2P13521 617 aa17.45■□□□□ 0.38
CACNA1A-238ENST00000637276 CUL1Q13616 776 aa17.45■□□□□ 0.38
CACNA1A-238ENST00000637276 FASTKD1Q53R41 847 aaKnown RBP17.45■□□□□ 0.38
CACNA1A-238ENST00000637276 STAT2P52630 851 aa17.45■□□□□ 0.38
CACNA1A-238ENST00000637276 DDI2Q5TDH0 399 aa17.45■□□□□ 0.38
CACNA1A-238ENST00000637276 TUBGCP2Q9BSJ2 902 aa17.45■□□□□ 0.38
CACNA1A-238ENST00000637276 SOS2Q07890 1332 aaPredicted RBP17.45■□□□□ 0.38
CACNA1A-238ENST00000637276 ZNF233A6NK53 670 aa17.45■□□□□ 0.38
CACNA1A-238ENST00000637276 MFN1Q8IWA4 741 aa17.45■□□□□ 0.38
CACNA1A-238ENST00000637276 UPF3AQ9H1J1 476 aaKnown RBP17.45■□□□□ 0.38
CACNA1A-238ENST00000637276 RPAP3Q9H6T3 665 aaPredicted RBP17.45■□□□□ 0.38
CACNA1A-238ENST00000637276 DTNAQ9Y4J8 743 aa17.45■□□□□ 0.38
CACNA1A-238ENST00000637276 SNX5Q9Y5X3 404 aa17.45■□□□□ 0.38
CACNA1A-238ENST00000637276 UBE4BO95155 1302 aa17.45■□□□□ 0.38
CACNA1A-238ENST00000637276 RNF103-CHMP3A0A140T963 221 aa17.44■□□□□ 0.38
CACNA1A-238ENST00000637276 ABCB11O95342 1321 aa17.44■□□□□ 0.38
CACNA1A-238ENST00000637276 EFTUD2Q15029 972 aaKnown RBP eCLIP17.44■□□□□ 0.38
CACNA1A-238ENST00000637276 FANCBQ8NB91 859 aa17.44■□□□□ 0.38
CACNA1A-238ENST00000637276 ACCSQ96QU6 501 aa17.44■□□□□ 0.38
CACNA1A-238ENST00000637276 PIGSQ96S52 555 aa17.44■□□□□ 0.38
CACNA1A-238ENST00000637276 PAPOLBQ9NRJ5 636 aaKnown RBP17.44■□□□□ 0.38
CACNA1A-238ENST00000637276 KDM5BQ9UGL1 1544 aa17.44■□□□□ 0.38
CACNA1A-238ENST00000637276 CHRNDQ07001 517 aa17.44■□□□□ 0.38
CACNA1A-238ENST00000637276 IYDQ6PHW0 289 aa17.44■□□□□ 0.38
CACNA1A-238ENST00000637276 SPACA7Q96KW9 195 aa17.44■□□□□ 0.38
CACNA1A-238ENST00000637276 COL4A3BPQ9Y5P4 624 aa17.44■□□□□ 0.38
CACNA1A-238ENST00000637276 GOLGA8RI6L899 631 aa17.44■□□□□ 0.38
CACNA1A-238ENST00000637276 ECEL1O95672 775 aa17.44■□□□□ 0.38
CACNA1A-238ENST00000637276 H2AFZP0C0S5 128 aa17.44■□□□□ 0.38
CACNA1A-238ENST00000637276 SP100P23497 879 aaPredicted RBP17.44■□□□□ 0.38
CACNA1A-238ENST00000637276 PSMC2P35998 433 aaKnown RBP17.44■□□□□ 0.38
CACNA1A-238ENST00000637276 AP2B1P63010 937 aa17.44■□□□□ 0.38
CACNA1A-238ENST00000637276 OLFML2BQ68BL8 750 aa17.44■□□□□ 0.38
CACNA1A-238ENST00000637276 KLHL24Q6TFL4 600 aa17.44■□□□□ 0.38
CACNA1A-238ENST00000637276 H2AFVQ71UI9 128 aa17.44■□□□□ 0.38
CACNA1A-238ENST00000637276 DCUN1D1Q96GG9 259 aa17.44■□□□□ 0.38
CACNA1A-238ENST00000637276 NEURL1BA8MQ27 555 aa17.43■□□□□ 0.38
CACNA1A-238ENST00000637276 MAP4P27816 1152 aaKnown RBP17.43■□□□□ 0.38
CACNA1A-238ENST00000637276 TAF1BQ53T94 588 aaPredicted RBP17.43■□□□□ 0.38
CACNA1A-238ENST00000637276 TMC2Q8TDI7 906 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms